Streptococcus ovis (DSM 16829, CCUG 39485, CIP 107097)

Name: Streptococcus ovis (DSM 16829, CCUG 39485, CIP 107097)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 14820

Type strain

Strain Designation S369-98-1

Culture col. no. DSM 16829 CCUG 39485 CIP 107097 LMG 19174 S369-98-1

NCBI tax ID(s) 1123312 82806

Special Collections DSMZ CCUG CIP

Links

Streptococcus ovis S369-98-1 is a microaerophile, mesophilic, Gram-positive animal pathogen that was isolated from ovine, superficial abscess on skin, 12-year old ewe.

Gram-positive ovoid-shaped microaerophile mesophilic animal pathogen genome sequence 16S sequence

Name and taxonomic classification

SI-ID 14632

LMG 19174,CCUG 39485,CIP 107097,DSM 16829

@ref 20215

Last LPSN update 2025-12-16 09:50:27

Domain Bacillati

Phylum Bacillota

Class Bacilli

Order Lactobacillales

Family Streptococcaceae

Genus Streptococcus

Species Streptococcus ovis

Full scientific name Streptococcus ovis Collins et al. 2001

BacDive ID	Other strains from **Streptococcus ovis** (5)	Type strain
145483	S. ovis CCUG 28672
150564	S. ovis CCUG 41614
150760	S. ovis CCUG 42212 A
150869	S. ovis CCUG 42595
150870	S. ovis CCUG 42596

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Motility	Confidence
121476	positive	ovoid-shaped
125438				90.979

Colony morphology

@ref	Incubation period	Hemolysis ability
6621	1-2 days
54815	1 day
121476		1

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
6621	TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)	Medium recipe at MediaDive	Name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Yeast extract 3.0 g/l Distilled water
6621	COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)	Medium recipe at MediaDive	Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base
39658	MEDIUM 72- for trypto casein soja agar		Distilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g)
121476	CIP Medium 72	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
6621	positive	growth	37	mesophilic
39658	positive	growth	37	mesophilic
54815	positive	growth	30-37	mesophilic
121476	positive	growth	25-41
121476	negative	growth	10
121476	negative	growth	45

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
6621	microaerophile
121476	facultative anaerobe
125439	microaerophile	98.4

Halophily

@ref	Salt	Growth	Tested relation	Concentration
121476	NaCl		growth	6.5 %

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68371	27613 ChEBI	amygdalin	-	builds acid from	from API 50CH acid
68371	18305 ChEBI	arbutin	+	builds acid from	from API 50CH acid
68381	29016 ChEBI	arginine	+	hydrolysis	from API rID32STR
68371	17057 ChEBI	cellobiose	+	builds acid from	from API 50CH acid
68371	17108 ChEBI	D-arabinose	-	builds acid from	from API 50CH acid
68381	18333 ChEBI	D-arabitol	-	builds acid from	from API rID32STR
68371	18333 ChEBI	D-arabitol	+	builds acid from	from API 50CH acid
68371	15824 ChEBI	D-fructose	+	builds acid from	from API 50CH acid
68371	28847 ChEBI	D-fucose	-	builds acid from	from API 50CH acid
68371	12936 ChEBI	D-galactose	+	builds acid from	from API 50CH acid
68371	17634 ChEBI	D-glucose	+	builds acid from	from API 50CH acid
68371	62318 ChEBI	D-lyxose	-	builds acid from	from API 50CH acid
68371	16899 ChEBI	D-mannitol	+	builds acid from	from API 50CH acid
68381	16899 ChEBI	D-mannitol	+	builds acid from	from API rID32STR
68371	16024 ChEBI	D-mannose	+	builds acid from	from API 50CH acid
68381	16988 ChEBI	D-ribose	-	builds acid from	from API rID32STR
68371	16988 ChEBI	D-ribose	-	builds acid from	from API 50CH acid
68371	17924 ChEBI	D-sorbitol	+	builds acid from	from API 50CH acid
68381	16443 ChEBI	D-tagatose	+	builds acid from	from API rID32STR
68371	16443 ChEBI	D-tagatose	+	builds acid from	from API 50CH acid
68371	65327 ChEBI	D-xylose	-	builds acid from	from API 50CH acid
68371	17113 ChEBI	erythritol	-	builds acid from	from API 50CH acid
121476	4853 ChEBI	esculin	+	hydrolysis
68371	4853 ChEBI	esculin	+	builds acid from	from API 50CH acid
68371	16813 ChEBI	galactitol	-	builds acid from	from API 50CH acid
68371	28066 ChEBI	gentiobiose	-	builds acid from	from API 50CH acid
68371	24265 ChEBI	gluconate	-	builds acid from	from API 50CH acid
68371	17754 ChEBI	glycerol	-	builds acid from	from API 50CH acid
68381	28087 ChEBI	glycogen	+	builds acid from	from API rID32STR
68371	28087 ChEBI	glycogen	+	builds acid from	from API 50CH acid
68381	606565 ChEBI	hippurate	-	hydrolysis	from API rID32STR
121476	606565 ChEBI	hippurate	+	hydrolysis
68371	15443 ChEBI	inulin	+	builds acid from	from API 50CH acid
68381	30849 ChEBI	L-arabinose	-	builds acid from	from API rID32STR
68371	30849 ChEBI	L-arabinose	-	builds acid from	from API 50CH acid
68371	18403 ChEBI	L-arabitol	-	builds acid from	from API 50CH acid
68371	18287 ChEBI	L-fucose	-	builds acid from	from API 50CH acid
68371	62345 ChEBI	L-rhamnose	+	builds acid from	from API 50CH acid
68371	17266 ChEBI	L-sorbose	-	builds acid from	from API 50CH acid
68371	65328 ChEBI	L-xylose	-	builds acid from	from API 50CH acid
68381	17716 ChEBI	lactose	+	builds acid from	from API rID32STR
68371	17716 ChEBI	lactose	+	builds acid from	from API 50CH acid
68381	17306 ChEBI	maltose	+	builds acid from	from API rID32STR
68371	17306 ChEBI	maltose	+	builds acid from	from API 50CH acid
68381	6731 ChEBI	melezitose	-	builds acid from	from API rID32STR
68371	6731 ChEBI	melezitose	-	builds acid from	from API 50CH acid
68381	28053 ChEBI	melibiose	-	builds acid from	from API rID32STR
68371	28053 ChEBI	melibiose	+	builds acid from	from API 50CH acid
68371	320061 ChEBI	methyl alpha-D-glucopyranoside	-	builds acid from	from API 50CH acid
68371	43943 ChEBI	methyl alpha-D-mannoside	-	builds acid from	from API 50CH acid
68381	320055 ChEBI	methyl beta-D-glucopyranoside	-	builds acid from	from API rID32STR
68371	74863 ChEBI	methyl beta-D-xylopyranoside	-	builds acid from	from API 50CH acid
68371	17268 ChEBI	myo-inositol	-	builds acid from	from API 50CH acid
68371	59640 ChEBI	N-acetylglucosamine	+	builds acid from	from API 50CH acid
121476	17632 ChEBI	nitrate	-	reduction
121476	16301 ChEBI	nitrite	-	reduction
68371		Potassium 2-ketogluconate	-	builds acid from	from API 50CH acid
68371		Potassium 5-ketogluconate	+	builds acid from	from API 50CH acid
68381	27941 ChEBI	pullulan	-	builds acid from	from API rID32STR
68381	16634 ChEBI	raffinose	+	builds acid from	from API rID32STR
68371	16634 ChEBI	raffinose	+	builds acid from	from API 50CH acid
68371	15963 ChEBI	ribitol	-	builds acid from	from API 50CH acid
68371	17814 ChEBI	salicin	+	builds acid from	from API 50CH acid
68381	30911 ChEBI	sorbitol	+	builds acid from	from API rID32STR
68371	28017 ChEBI	starch	+	builds acid from	from API 50CH acid
68381	17992 ChEBI	sucrose	+	builds acid from	from API rID32STR
68371	17992 ChEBI	sucrose	+	builds acid from	from API 50CH acid
68381	27082 ChEBI	trehalose	+	builds acid from	from API rID32STR
68371	27082 ChEBI	trehalose	+	builds acid from	from API 50CH acid
68371	32528 ChEBI	turanose	-	builds acid from	from API 50CH acid
68381	16199 ChEBI	urea	-	hydrolysis	from API rID32STR
68371	17151 ChEBI	xylitol	-	builds acid from	from API 50CH acid

Antibiotic resistance

@ref	Metabolite	Is sensitive	Is resistant
121476	0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)

Metabolite production

@ref	Chebi-ID	Metabolite	Production
68381	15688 ChEBI	acetoin		from API rID32STR

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test
68381	15688 ChEBI	acetoin	-	from API rID32STR
121476	15688 ChEBI	acetoin	-

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
68381	Alanyl-Phenylalanyl-Proline arylamidase	+		from API rID32STR
121476	alcohol dehydrogenase	-	1.1.1.1
68382	alkaline phosphatase	-	3.1.3.1	from API zym
68381	alkaline phosphatase	-	3.1.3.1	from API rID32STR
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68381	alpha-galactosidase	+	3.2.1.22	from API rID32STR
68382	alpha-glucosidase	+	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
68381	arginine dihydrolase	+	3.5.3.6	from API rID32STR
68382	beta-galactosidase	-	3.2.1.23	from API zym
121476	beta-galactosidase	+	3.2.1.23
68381	beta-galactosidase	-	3.2.1.23	from API rID32STR
68381	beta-glucosidase	+	3.2.1.21	from API rID32STR
68382	beta-glucosidase	+	3.2.1.21	from API zym
68381	beta-glucuronidase	-	3.2.1.31	from API rID32STR
68382	beta-glucuronidase	-	3.2.1.31	from API zym
68381	beta-mannosidase	-	3.2.1.25	from API rID32STR
121476	catalase	-	1.11.1.6
68382	cystine arylamidase	-	3.4.11.3	from API zym
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	-		from API zym
121476	gamma-glutamyltransferase	-	2.3.2.2
68381	glycyl tryptophan arylamidase	+		from API rID32STR
68382	leucine arylamidase	+	3.4.11.1	from API zym
68382	lipase (C 14)	-		from API zym
121476	lysine decarboxylase	-	4.1.1.18
68381	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API rID32STR
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
121476	ornithine decarboxylase	-	4.1.1.17
121476	oxidase	-
68381	pyrrolidonyl arylamidase	-	3.4.19.3	from API rID32STR
68382	trypsin	-	3.4.21.4	from API zym
68381	urease	-	3.5.1.5	from API rID32STR
68382	valine arylamidase	+		from API zym

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
121476	-	-	+	-	-	+	+	-	-	-	+	+	-	-	-	+	+	-	-	-

API 50CHac

@ref	ControlQ	GLY	ERY	DARA	LARA	RIB	DXYL	LXYL	ADO	MDX	GAL	GLU	FRU	MNE	SBE	RHA	DUL	INO	MAN	SOR	MDM	MDG	NAG	AMY	ARB	ESC	SAL	CEL	MAL	LAC	MEL	SAC	TRE	INU	MLZ	RAF	AMD	GLYG	XLT	GEN	TUR	LYX	TAG	DFUC	LFUC	DARL	LARL	GNT	2KG	5KG
121476	not determinedn.d.	-	-	-	-	-	-	-	-	-	+	+	+	+	-	+	-	-	+	+	-	-	+	-	+	+	+	+	+	+	+	+	+	+	-	+	+	+	-	-	-	-	+	-	-	+	-	-	-	+

API rID32STR

@ref	ADH (Arg)	beta GLU	beta GAR	beta GUR	alpha GAL	PAL	RIB	MAN	SOR	LAC	TRE	RAF	SAC	LARA	DARL	Acid from alpha-cyclodextrinCDEX	Acetoin production (Voges Proskauer test)VP	Alanyl-Phenylalanyl-Proline arylamidaseAPPA	beta GAL	Pyrrolidonyl arylamidasePyrA	N-Acetyl-glucosaminidasebeta NAG	Glycyl-tryptophan arylamidaseGTA	HIP	GLYG	PUL	MAL	MEL	MLZ	Acidification of methyl beta-D-glucopyranosideMbeta DG	TAG	beta MAN	URE
6621	+	+	-	-	+	-	-	+	+	+	+	+	+	-	-	-	-	+	-	-	-	+	-	+	-	+	-	-	-	+	-	-
6621	+	+	-	-	+	-	-	+	+	+	+	+	+	-	-	+/-	-	+	-	-	-	+	-	+	-	+	-	-	-	+	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host	#Mammals	#Caprinae (Sheep/Goat)
#Host Body-Site	#Other	#Abscess
#Host Body-Site	#Organ	#Skin, Nail, Hair

Isolation

@ref	Sample type	Sampling date	Geographic location	Country	Country ISO 3 Code	Continent	Isolation date
6621	ovine, superficial abscess on skin, 12-year old ewe		Inverness	United Kingdom	GBR	Europe
54815	Ovine superficial abscess on skin,12-year old ewe	1998	Inverness	United Kingdom	GBR	Europe
121476	Animal, Ovine, superficial abscess on skin		Inverness	United Kingdom	GBR	Europe	1998

Taxonmaps

69479

Global distribution of 16S sequence Y17358 (>99% sequence identity) for Streptococcus ovis subclade from Microbeatlas

Aquatic Samples	55
Soil Samples	68
Animal Samples	2361
Plant Samples	3
Total Samples	2487

Interaction and safety

Risk assessment

@ref	Pathogenicity animal	Biosafety level	Biosafety level comment
6621		2	Risk group (German classification) According to TRBA 466
121476		2	Risk group (French classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM38012v1 assembly for Streptococcus ovis DSM 16829	scaffold	GCA_000380125	1123312.3	2515154025	1123312	73.63

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
20218	Streptococcus ovis strain DSM 16829 16S ribosomal RNA gene, partial sequence	DQ118674	435	82806
6621	Streptococcus sp. S369-98-1 16S rRNA gene	Y17358	1377	82806
124043	Streptococcus ovis strain DSM 16829 16S ribosomal RNA gene, partial sequence 16S-23S ribosomal RNA intergenic spacer, complete sequence and 23S ribosomal RNA gene, partial sequence.	MK330579	4295	82806
124043	Streptococcus ovis strain DSM 16829 16S ribosomal RNA gene, partial sequence.	MK330537	1287	82806

GC content

6621

GC-content (mol%)38

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Streptococcus ovis DSM 16829
NCBI: GCA_000380125

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	no	79.90	no
125439	motility	BacteriaNetⓘ	no	76.40	no
125439	gram_stain	BacteriaNetⓘ	positive	80.20	no
125439	oxygen_tolerance	BacteriaNetⓘ	microaerophile	98.40	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Streptococcus ovis DSM 16829 DSM 16829
NCBI: GCA_000380125.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	87.29	no
125438	anaerobic	anaerobicⓘ	no	89.68	yes
125438	aerobic	aerobicⓘ	no	94.55	no
125438	spore-forming	spore-formingⓘ	no	81.84	no
125438	thermophilic	thermophileⓘ	no	96.00	yes
125438	flagellated	motile2+ⓘ	no	90.98	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Genetics	Comparative genomic analysis provides insights into the genetic diversity and pathogenicity of the genus Brucella.	Yang Z, Chai Z, Wang X, Zhang Z, Zhang F, Kang F, Liu W, Ren H, Jin Y, Yue J.	Front Microbiol	10.3389/fmicb.2024.1389859	2024
	Bifidobacterium breve PRL2020: Antibiotic-Resistant Profile and Genomic Detection of Antibiotic Resistance Determinants.	Di Pierro F, Campedelli I, De Marta P, Fracchetti F, Del Casale A, Cavecchia I, Matera M, Cazzaniga M, Bertuccioli A, Guasti L, Zerbinati N.	Microorganisms	10.3390/microorganisms11071649	2023
Phylogeny	Helcococcus ovis in a patient with an artificial eye: a case report and literature review.	Mao L, Chen Z, Lu Y, Yu J, Zhou Y, Lin Q, Luo Y, Sun Z.	BMC Infect Dis	10.1186/s12879-018-3310-7	2018
Genetics	Comparative genomic and phylogenomic analyses of the Bifidobacteriaceae family.	Lugli GA, Milani C, Turroni F, Duranti S, Mancabelli L, Mangifesta M, Ferrario C, Modesto M, Mattarelli P, Jiri K, van Sinderen D, Ventura M.	BMC Genomics	10.1186/s12864-017-3955-4	2017
Phylogeny	Streptococcus ovis sp. nov., isolated from sheep.	Collins MD, Hutson RA, Hoyles L, Falsen E, Nikolaitchouk N, Foster G	Int J Syst Evol Microbiol	10.1099/00207713-51-3-1147	2001

References

#6621	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 16829
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#39658	; Curators of the CIP;
#54815	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 39485
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#68371	Automatically annotated from API 50CH acid .
#68381	Automatically annotated from API rID32STR .
#68382	Automatically annotated from API zym .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#121476	Collection of Institut Pasteur ; Curators of the CIP; CIP 107097
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Streptococcus ovis (DSM 16829, CCUG 39485, CIP 107097)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Halophily

Metabolite utilization

Antibiotic resistance

Metabolite production

Metabolite tests

Enzymes

API zym

API 50CHac

API rID32STR

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_000380125

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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