Rothia dentocariosa CCUG 33996 is a bacterium that was isolated from Human bucca.
Bacteria| @ref 20215 |
|
|
| Domain Bacteria |
| Phylum Actinomycetota |
| Class Actinomycetes |
| Order Micrococcales |
| Family Micrococcaceae |
| Genus Rothia |
| Species Rothia dentocariosa |
| Full scientific name Rothia dentocariosa corrig. (Onishi 1949) Georg and Brown 1967 (Approved Lists 1980) |
| Synonyms (3) |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 68381 | 40585 ChEBI | alpha-cyclodextrin | - | builds acid from | from API rID32STR |
| 68375 | 22599 ChEBI | arabinose | - | fermentation | from API ID32STA |
| 68381 | 29016 ChEBI | arginine | - | hydrolysis | from API rID32STR |
| 68378 | 29016 ChEBI | arginine | - | hydrolysis | from API STA |
| 68375 | 29016 ChEBI | arginine | - | hydrolysis | from API ID32STA |
| 68375 | 17057 ChEBI | cellobiose | - | fermentation | from API ID32STA |
| 68381 | 18333 ChEBI | D-arabitol | - | builds acid from | from API rID32STR |
| 68378 | 15824 ChEBI | D-fructose | + | builds acid from | from API STA |
| 68375 | 15824 ChEBI | D-fructose | + | fermentation | from API ID32STA |
| 68378 | 17634 ChEBI | D-glucose | - | builds acid from | from API STA |
| 68379 | 17634 ChEBI | D-glucose | + | fermentation | from API Coryne |
| 68375 | 17634 ChEBI | D-glucose | + | fermentation | from API ID32STA |
| 68378 | 16899 ChEBI | D-mannitol | + | builds acid from | from API STA |
| 68379 | 16899 ChEBI | D-mannitol | - | fermentation | from API Coryne |
| 68375 | 16899 ChEBI | D-mannitol | - | fermentation | from API ID32STA |
| 68381 | 16899 ChEBI | D-mannitol | - | builds acid from | from API rID32STR |
| 68375 | 16024 ChEBI | D-mannose | - | fermentation | from API ID32STA |
| 68378 | 16024 ChEBI | D-mannose | + | builds acid from | from API STA |
| 68381 | 16988 ChEBI | D-ribose | - | builds acid from | from API rID32STR |
| 68379 | 16988 ChEBI | D-ribose | - | fermentation | from API Coryne |
| 68375 | 16988 ChEBI | D-ribose | - | fermentation | from API ID32STA |
| 68381 | 16443 ChEBI | D-tagatose | - | builds acid from | from API rID32STR |
| 68379 | 65327 ChEBI | D-xylose | - | fermentation | from API Coryne |
| 68378 | 65327 ChEBI | D-xylose | - | builds acid from | from API STA |
| 68379 | 4853 ChEBI | esculin | + | hydrolysis | from API Coryne |
| 68375 | 4853 ChEBI | esculin | - | hydrolysis | from API ID32STA |
| 68379 | 5291 ChEBI | gelatin | + | hydrolysis | from API Coryne |
| 68381 | 28087 ChEBI | glycogen | - | builds acid from | from API rID32STR |
| 68379 | 28087 ChEBI | glycogen | - | fermentation | from API Coryne |
| 68381 | 606565 ChEBI | hippurate | - | hydrolysis | from API rID32STR |
| 68381 | 30849 ChEBI | L-arabinose | - | builds acid from | from API rID32STR |
| 68378 | 17716 ChEBI | lactose | + | builds acid from | from API STA |
| 68379 | 17716 ChEBI | lactose | - | fermentation | from API Coryne |
| 68375 | 17716 ChEBI | lactose | - | fermentation | from API ID32STA |
| 68381 | 17716 ChEBI | lactose | - | builds acid from | from API rID32STR |
| 68381 | 17306 ChEBI | maltose | + | builds acid from | from API rID32STR |
| 68378 | 17306 ChEBI | maltose | + | builds acid from | from API STA |
| 68375 | 17306 ChEBI | maltose | + | fermentation | from API ID32STA |
| 68379 | 17306 ChEBI | maltose | + | fermentation | from API Coryne |
| 68381 | 6731 ChEBI | melezitose | - | builds acid from | from API rID32STR |
| 68378 | 28053 ChEBI | melibiose | - | builds acid from | from API STA |
| 68381 | 28053 ChEBI | melibiose | - | builds acid from | from API rID32STR |
| 68378 | 320061 ChEBI | methyl alpha-D-glucopyranoside | + | builds acid from | from API STA |
| 68381 | 320055 ChEBI | methyl beta-D-glucopyranoside | - | builds acid from | from API rID32STR |
| 68378 | 59640 ChEBI | N-acetylglucosamine | - | builds acid from | from API STA |
| 68375 | 59640 ChEBI | N-acetylglucosamine | - | fermentation | from API ID32STA |
| 68378 | 17632 ChEBI | nitrate | - | reduction | from API STA |
| 68379 | 17632 ChEBI | nitrate | + | reduction | from API Coryne |
| 68375 | 17632 ChEBI | nitrate | + | reduction | from API ID32STA |
| 68375 | 18257 ChEBI | ornithine | - | degradation | from API ID32STA |
| 68381 | 27941 ChEBI | pullulan | - | builds acid from | from API rID32STR |
| 68378 | 16634 ChEBI | raffinose | + | builds acid from | from API STA |
| 68375 | 16634 ChEBI | raffinose | - | fermentation | from API ID32STA |
| 68381 | 16634 ChEBI | raffinose | - | builds acid from | from API rID32STR |
| 68381 | 30911 ChEBI | sorbitol | - | builds acid from | from API rID32STR |
| 68381 | 17992 ChEBI | sucrose | + | builds acid from | from API rID32STR |
| 68378 | 17992 ChEBI | sucrose | - | builds acid from | from API STA |
| 68379 | 17992 ChEBI | sucrose | + | fermentation | from API Coryne |
| 68375 | 17992 ChEBI | sucrose | + | fermentation | from API ID32STA |
| 68381 | 27082 ChEBI | trehalose | + | builds acid from | from API rID32STR |
| 68378 | 27082 ChEBI | trehalose | - | builds acid from | from API STA |
| 68375 | 27082 ChEBI | trehalose | + | fermentation | from API ID32STA |
| 68375 | 32528 ChEBI | turanose | - | fermentation | from API ID32STA |
| 68381 | 16199 ChEBI | urea | - | hydrolysis | from API rID32STR |
| 68378 | 16199 ChEBI | urea | - | hydrolysis | from API STA |
| 68379 | 16199 ChEBI | urea | - | hydrolysis | from API Coryne |
| 68375 | 16199 ChEBI | urea | - | hydrolysis | from API ID32STA |
| 68378 | 17151 ChEBI | xylitol | - | builds acid from | from API STA |
| @ref | ChEBI | Metabolite | Is sensitive | Sensitivity conc. | |
|---|---|---|---|---|---|
| 68378 | lysostaphin | from API STA | |||
| 68375 | 28368 | novobiocin | 1.8 µg | from API ID32STA |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68382 | acid phosphatase | - | 3.1.3.2 | from API zym |
| 68381 | Alanyl-Phenylalanyl-Proline arylamidase | + | from API rID32STR | |
| 68382 | alkaline phosphatase | - | 3.1.3.1 | from API zym |
| 68381 | alkaline phosphatase | - | 3.1.3.1 | from API rID32STR |
| 68375 | alkaline phosphatase | - | 3.1.3.1 | from API ID32STA |
| 68378 | alkaline phosphatase | + | 3.1.3.1 | from API STA |
| 68379 | alkaline phosphatase | - | 3.1.3.1 | from API Coryne |
| 68382 | alpha-chymotrypsin | - | 3.4.21.1 | from API zym |
| 68382 | alpha-fucosidase | - | 3.2.1.51 | from API zym |
| 68382 | alpha-galactosidase | - | 3.2.1.22 | from API zym |
| 68381 | alpha-galactosidase | - | 3.2.1.22 | from API rID32STR |
| 68382 | alpha-glucosidase | + | 3.2.1.20 | from API zym |
| 68379 | alpha-glucosidase | + | 3.2.1.20 | from API Coryne |
| 68382 | alpha-mannosidase | - | 3.2.1.24 | from API zym |
| 68381 | arginine dihydrolase | - | 3.5.3.6 | from API rID32STR |
| 68378 | arginine dihydrolase | - | 3.5.3.6 | from API STA |
| 68375 | arginine dihydrolase | - | 3.5.3.6 | from API ID32STA |
| 68382 | beta-galactosidase | - | 3.2.1.23 | from API zym |
| 68375 | beta-galactosidase | - | 3.2.1.23 | from API ID32STA |
| 68381 | beta-galactosidase | - | 3.2.1.23 | from API rID32STR |
| 68379 | beta-galactosidase | - | 3.2.1.23 | from API Coryne |
| 68381 | beta-glucosidase | - | 3.2.1.21 | from API rID32STR |
| 68375 | beta-glucosidase | - | 3.2.1.21 | from API ID32STA |
| 68379 | beta-glucosidase | + | 3.2.1.21 | from API Coryne |
| 68382 | beta-glucosidase | - | 3.2.1.21 | from API zym |
| 68382 | beta-glucuronidase | - | 3.2.1.31 | from API zym |
| 68381 | beta-glucuronidase | - | 3.2.1.31 | from API rID32STR |
| 68375 | beta-glucuronidase | - | 3.2.1.31 | from API ID32STA |
| 68379 | beta-glucuronidase | - | 3.2.1.31 | from API Coryne |
| 68381 | beta-mannosidase | - | 3.2.1.25 | from API rID32STR |
| 68382 | cystine arylamidase | - | 3.4.11.3 | from API zym |
| 68382 | esterase (C 4) | - | from API zym | |
| 68382 | esterase lipase (C 8) | - | from API zym | |
| 68379 | gelatinase | + | from API Coryne | |
| 68381 | glycyl tryptophan arylamidase | - | from API rID32STR | |
| 68375 | L-arginine arylamidase | + | from API ID32STA | |
| 68382 | leucine arylamidase | + | 3.4.11.1 | from API zym |
| 68382 | lipase (C 14) | - | from API zym | |
| 68382 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | from API zym |
| 68381 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | from API rID32STR |
| 68379 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | from API Coryne |
| 68382 | naphthol-AS-BI-phosphohydrolase | - | from API zym | |
| 68375 | ornithine decarboxylase | - | 4.1.1.17 | from API ID32STA |
| 68379 | pyrazinamidase | + | 3.5.1.B15 | from API Coryne |
| 68379 | pyrrolidonyl arylamidase | + | 3.4.19.3 | from API Coryne |
| 68381 | pyrrolidonyl arylamidase | + | 3.4.19.3 | from API rID32STR |
| 68375 | pyrrolidonyl arylamidase | - | 3.4.19.3 | from API ID32STA |
| 68382 | trypsin | - | 3.4.21.4 | from API zym |
| 68381 | urease | - | 3.5.1.5 | from API rID32STR |
| 68378 | urease | - | 3.5.1.5 | from API STA |
| 68379 | urease | - | 3.5.1.5 | from API Coryne |
| 68375 | urease | - | 3.5.1.5 | from API ID32STA |
| 68382 | valine arylamidase | - | from API zym |
| @ref | pathway | enzyme coverage | annotated reactions | external links | |
|---|---|---|---|---|---|
| 66794 | enterobactin biosynthesis | 100 | 3 of 3 | ||
| 66794 | vitamin K metabolism | 100 | 5 of 5 | ||
| 66794 | cis-vaccenate biosynthesis | 100 | 2 of 2 | ||
| 66794 | ppGpp biosynthesis | 100 | 4 of 4 | ||
| 66794 | adipate degradation | 100 | 2 of 2 | ||
| 66794 | acetate fermentation | 100 | 4 of 4 | ||
| 66794 | acetoin degradation | 100 | 3 of 3 | ||
| 66794 | palmitate biosynthesis | 100 | 22 of 22 | ||
| 66794 | methylglyoxal degradation | 100 | 5 of 5 | ||
| 66794 | formaldehyde oxidation | 100 | 3 of 3 | ||
| 66794 | UDP-GlcNAc biosynthesis | 100 | 3 of 3 | ||
| 66794 | coenzyme A metabolism | 100 | 4 of 4 | ||
| 66794 | CDP-diacylglycerol biosynthesis | 100 | 2 of 2 | ||
| 66794 | teichoic acid biosynthesis | 100 | 1 of 1 | ||
| 66794 | anapleurotic synthesis of oxalacetate | 100 | 1 of 1 | ||
| 66794 | folate polyglutamylation | 100 | 1 of 1 | ||
| 66794 | denitrification | 100 | 2 of 2 | ||
| 66794 | chorismate metabolism | 88.89 | 8 of 9 | ||
| 66794 | heme metabolism | 85.71 | 12 of 14 | ||
| 66794 | pentose phosphate pathway | 81.82 | 9 of 11 | ||
| 66794 | peptidoglycan biosynthesis | 80 | 12 of 15 | ||
| 66794 | threonine metabolism | 80 | 8 of 10 | ||
| 66794 | cellulose degradation | 80 | 4 of 5 | ||
| 66794 | photosynthesis | 78.57 | 11 of 14 | ||
| 66794 | aspartate and asparagine metabolism | 77.78 | 7 of 9 | ||
| 66794 | valine metabolism | 77.78 | 7 of 9 | ||
| 66794 | molybdenum cofactor biosynthesis | 77.78 | 7 of 9 | ||
| 66794 | phenylalanine metabolism | 76.92 | 10 of 13 | ||
| 66794 | isoleucine metabolism | 75 | 6 of 8 | ||
| 66794 | glycogen biosynthesis | 75 | 3 of 4 | ||
| 66794 | 6-hydroxymethyl-dihydropterin diphosphate biosynthesis | 75 | 6 of 8 | ||
| 66794 | flavin biosynthesis | 73.33 | 11 of 15 | ||
| 66794 | glycolysis | 70.59 | 12 of 17 | ||
| 66794 | CO2 fixation in Crenarchaeota | 66.67 | 6 of 9 | ||
| 66794 | NAD metabolism | 66.67 | 12 of 18 | ||
| 66794 | L-lactaldehyde degradation | 66.67 | 2 of 3 | ||
| 66794 | octane oxidation | 66.67 | 2 of 3 | ||
| 66794 | alanine metabolism | 65.52 | 19 of 29 | ||
| 66794 | tetrahydrofolate metabolism | 64.29 | 9 of 14 | ||
| 66794 | C4 and CAM-carbon fixation | 62.5 | 5 of 8 | ||
| 66794 | gluconeogenesis | 62.5 | 5 of 8 | ||
| 66794 | leucine metabolism | 61.54 | 8 of 13 | ||
| 66794 | vitamin B1 metabolism | 61.54 | 8 of 13 | ||
| 66794 | lipoate biosynthesis | 60 | 3 of 5 | ||
| 66794 | phenylacetate degradation (aerobic) | 60 | 3 of 5 | ||
| 66794 | glycogen metabolism | 60 | 3 of 5 | ||
| 66794 | non-pathway related | 57.89 | 22 of 38 | ||
| 66794 | methionine metabolism | 57.69 | 15 of 26 | ||
| 66794 | isoprenoid biosynthesis | 57.69 | 15 of 26 | ||
| 66794 | ubiquinone biosynthesis | 57.14 | 4 of 7 | ||
| 66794 | glutamate and glutamine metabolism | 57.14 | 16 of 28 | ||
| 66794 | purine metabolism | 56.38 | 53 of 94 | ||
| 66794 | degradation of sugar alcohols | 56.25 | 9 of 16 | ||
| 66794 | serine metabolism | 55.56 | 5 of 9 | ||
| 66794 | d-mannose degradation | 55.56 | 5 of 9 | ||
| 66794 | cysteine metabolism | 55.56 | 10 of 18 | ||
| 66794 | proline metabolism | 54.55 | 6 of 11 | ||
| 66794 | pyrimidine metabolism | 53.33 | 24 of 45 | ||
| 66794 | oxidative phosphorylation | 51.65 | 47 of 91 | ||
| 66794 | sulfopterin metabolism | 50 | 2 of 4 | ||
| 66794 | ketogluconate metabolism | 50 | 4 of 8 | ||
| 66794 | ethanol fermentation | 50 | 1 of 2 | ||
| 66794 | CMP-KDO biosynthesis | 50 | 2 of 4 | ||
| 66794 | butanoate fermentation | 50 | 2 of 4 | ||
| 66794 | vitamin E metabolism | 50 | 2 of 4 | ||
| 66794 | suberin monomers biosynthesis | 50 | 1 of 2 | ||
| 66794 | starch degradation | 50 | 5 of 10 | ||
| 66794 | glutathione metabolism | 50 | 7 of 14 | ||
| 66794 | phenylmercury acetate degradation | 50 | 1 of 2 | ||
| 66794 | Entner Doudoroff pathway | 50 | 5 of 10 | ||
| 66794 | lipid metabolism | 48.39 | 15 of 31 | ||
| 66794 | metabolism of disaccharids | 45.45 | 5 of 11 | ||
| 66794 | lysine metabolism | 45.24 | 19 of 42 | ||
| 66794 | reductive acetyl coenzyme A pathway | 42.86 | 3 of 7 | ||
| 66794 | citric acid cycle | 42.86 | 6 of 14 | ||
| 66794 | propanol degradation | 42.86 | 3 of 7 | ||
| 66794 | cardiolipin biosynthesis | 42.86 | 3 of 7 | ||
| 66794 | tryptophan metabolism | 42.11 | 16 of 38 | ||
| 66794 | degradation of aromatic, nitrogen containing compounds | 41.67 | 5 of 12 | ||
| 66794 | 4-hydroxyphenylacetate degradation | 40 | 4 of 10 | ||
| 66794 | glycine betaine biosynthesis | 40 | 2 of 5 | ||
| 66794 | ethylmalonyl-CoA pathway | 40 | 2 of 5 | ||
| 66794 | arachidonate biosynthesis | 40 | 2 of 5 | ||
| 66794 | glycine metabolism | 40 | 4 of 10 | ||
| 66794 | dTDPLrhamnose biosynthesis | 37.5 | 3 of 8 | ||
| 66794 | arginine metabolism | 37.5 | 9 of 24 | ||
| 66794 | tyrosine metabolism | 35.71 | 5 of 14 | ||
| 66794 | bile acid biosynthesis, neutral pathway | 35.29 | 6 of 17 | ||
| 66794 | histidine metabolism | 34.48 | 10 of 29 | ||
| 66794 | acetyl CoA biosynthesis | 33.33 | 1 of 3 | ||
| 66794 | cyanate degradation | 33.33 | 1 of 3 | ||
| 66794 | selenocysteine biosynthesis | 33.33 | 2 of 6 | ||
| 66794 | degradation of hexoses | 33.33 | 6 of 18 | ||
| 66794 | glycolate and glyoxylate degradation | 33.33 | 2 of 6 | ||
| 66794 | IAA biosynthesis | 33.33 | 1 of 3 | ||
| 66794 | pantothenate biosynthesis | 33.33 | 2 of 6 | ||
| 66794 | (5R)-carbapenem carboxylate biosynthesis | 33.33 | 1 of 3 | ||
| 66794 | lipid A biosynthesis | 33.33 | 3 of 9 | ||
| 66794 | myo-inositol biosynthesis | 30 | 3 of 10 | ||
| 66794 | aclacinomycin biosynthesis | 28.57 | 2 of 7 | ||
| 66794 | d-xylose degradation | 27.27 | 3 of 11 | ||
| 66794 | dolichyl-diphosphooligosaccharide biosynthesis | 27.27 | 3 of 11 | ||
| 66794 | vitamin B6 metabolism | 27.27 | 3 of 11 | ||
| 66794 | ascorbate metabolism | 27.27 | 6 of 22 | ||
| 66794 | toluene degradation | 25 | 1 of 4 | ||
| 66794 | lactate fermentation | 25 | 1 of 4 | ||
| 66794 | cyclohexanol degradation | 25 | 1 of 4 | ||
| 66794 | androgen and estrogen metabolism | 25 | 4 of 16 | ||
| 66794 | biotin biosynthesis | 25 | 1 of 4 | ||
| 66794 | alginate biosynthesis | 25 | 1 of 4 | ||
| 66794 | urea cycle | 23.08 | 3 of 13 | ||
| 66794 | phosphatidylethanolamine bioynthesis | 23.08 | 3 of 13 | ||
| 66794 | nitrate assimilation | 22.22 | 2 of 9 | ||
| 66794 | degradation of pentoses | 21.43 | 6 of 28 |
| Metadata FA analysis | ||||||||||||||||||||||||||||||||||||||||||||||
| type of FA analysis | whole cell analysis | |||||||||||||||||||||||||||||||||||||||||||||
| method/protocol | CCUG | |||||||||||||||||||||||||||||||||||||||||||||
| @ref | 51880 | |||||||||||||||||||||||||||||||||||||||||||||
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| @ref | ADH (Arg) | beta GLU | beta GAR | beta GUR | alpha GAL | PAL | RIB | MAN | SOR | LAC | TRE | RAF | SAC | LARA | DARL | Acid from alpha-cyclodextrinCDEX | Acetoin production (Voges Proskauer test)VP | Alanyl-Phenylalanyl-Proline arylamidaseAPPA | beta GAL | Pyrrolidonyl arylamidasePyrA | N-Acetyl-glucosaminidasebeta NAG | Glycyl-tryptophan arylamidaseGTA | HIP | GLYG | PUL | MAL | MEL | MLZ | Acidification of methyl beta-D-glucopyranosideMbeta DG | TAG | beta MAN | URE | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 51880 | - | - | - | - | - | - | - | - | - | - | + | - | + | - | - | - | + | + | - | + | - | - | - | - | - | + | - | - | - | - | - | - |
| Cat1 | Cat2 | Cat3 | |
|---|---|---|---|
| #Host | #Human | - | |
| #Host Body-Site | #Organ | #Skin, Nail, Hair | |
| #Infection | #Patient | - |
| @ref | Sample type | Sampling date | Geographic location | Country | Country ISO 3 Code | Continent | |
|---|---|---|---|---|---|---|---|
| 51880 | Human bucca | 1990 | Göteborg | Sweden | SWE | Europe |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #51880 | Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 33996 |
| #66794 | Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 ) |
| #68375 | Automatically annotated from API ID32STA . |
| #68378 | Automatically annotated from API STA . |
| #68379 | Automatically annotated from API Coryne . |
| #68381 | Automatically annotated from API rID32STR . |
| #68382 | Automatically annotated from API zym . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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If you want to cite this particular strain cite the following doi:
https://doi.org/10.13145/bacdive147679.20251217.10
When using BacDive for research please cite the following paper
BacDive in 2025: the core database for prokaryotic strain data