Cite this strain

Haemophilus somnus (CCUG 33701)

Name: Haemophilus somnus (CCUG 33701)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 147496

Type strain

Culture col. no. CCUG 33701

NCBI tax ID(s) 731

Special Collections CCUG

Links

Haemophilus somnus CCUG 33701 is a prokaryote that was isolated from Calf pneumonia.

Name and taxonomic classification

SI-ID 54597

CCUG 33701

@ref 51677

Phylum Not assigned to order

Class Not assigned to order

Order Not assigned to order

Family Not assigned to family

Genus Haemophilus

Species Haemophilus somnus

Type strain no

BacDive ID	Other strains from Haemophilus somnus (13)	Type strain
142529	H. somnus CCUG 12839, MCCM 03033
143375	H. somnus CCUG 18779
143376	H. somnus CCUG 18780
145271	H. somnus CCUG 28029
145514	H. somnus CCUG 28719
145522	H. somnus CCUG 28741
147031	H. somnus CCUG 32673
147133	H. somnus CCUG 32920
148292	H. somnus CCUG 35168
148391	H. somnus CCUG 35341
148508	H. somnus CCUG 35568
149305	H. somnus CCUG 37455
149382	H. somnus CCUG 37617

Morphology

Culture and growth conditions

Physiology and metabolism

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68377	15824 ChEBI	D-fructose	+	builds acid from	from API NH
68377	17634 ChEBI	D-glucose	+	builds acid from	from API NH
68377	17306 ChEBI	maltose	+	builds acid from	from API NH
68377	18257 ChEBI	ornithine	+	degradation	from API NH
68377	17992 ChEBI	sucrose	-	builds acid from	from API NH
68377	27897 ChEBI	tryptophan	+	energy source	from API NH
68377	16199 ChEBI	urea	-	hydrolysis	from API NH

Metabolite production

@ref	Chebi-ID	Metabolite	Production
68377	35581 ChEBI	indole		from API NH

Metabolite tests

@ref	Chebi-ID	Metabolite	Indole test
68377	35581 ChEBI	indole	+	from API NH

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
68382	alkaline phosphatase	-	3.1.3.1	from API zym
68377	alkaline phosphatase	-	3.1.3.1	from API NH
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	+	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	-	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
68382	beta-galactosidase	-	3.2.1.23	from API zym
68377	beta-galactosidase	-	3.2.1.23	from API NH
68382	beta-glucosidase	-	3.2.1.21	from API zym
68382	beta-glucuronidase	+	3.2.1.31	from API zym
68377	beta-lactamase	-	3.5.2.6	from API NH
68382	cystine arylamidase	-	3.4.11.3	from API zym
68382	esterase (C 4)	-		from API zym
68382	esterase lipase (C 8)	-		from API zym
68377	gamma-glutamyltransferase	-	2.3.2.2	from API NH
68382	leucine arylamidase	+	3.4.11.1	from API zym
68377	lipase	-		from API NH
68382	lipase (C 14)	-		from API zym
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
68377	ornithine decarboxylase	+	4.1.1.17	from API NH
68377	proline-arylamidase	-	3.4.11.5	from API NH
68382	trypsin	-	3.4.21.4	from API zym
68377	tryptophan deaminase	+	4.1.99.1	from API NH
68377	urease	-	3.5.1.5	from API NH
68382	valine arylamidase	-		from API zym

Fatty acid profile

Metadata FA analysis

@ref

51677

Fatty acid	Percentage	ECL
C16:1 ω7c	38.3	15.819
C16:0	28.9	16
C14:0	9.5	14
C14:0 3OH/C16:1 ISO I	7.7	15.485
C18:1 ω7c /12t/9t	4.3	17.824
C12:0	4.3	12
C18:2 ω6,9c/C18:0 ANTE	2.6	17.724
C18:1 ω9c	1.8	17.769
C18:0	1	18
unknown 13.961	0.8	13.961
C13:0 ISO 2OH	0.5	13.814
unknown 14.503	0.4	14.503

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
51677	-	-	-	-	-	+	-	-	-	-	+	+	-	-	+	-	-	-	-	+

API NH

@ref	PEN	GLU	FRU	MAL	SAC	ODC	URE	LIP	PAL	beta GAL	ProA	GGT	IND
51677	-	+	+	+	-	+	-	-	-	-	-	-	+

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host	#Mammals	#Bovinae (Cow, Cattle)
#Infection	#Disease	-

Isolation

@ref	Sample type	Sampling date	Geographic location	Country	Country ISO 3 Code	Continent
51677	Calf pneumonia	1994-12-13	Uppsala	Sweden	SWE	Europe

Interaction and safety

Sequence information

Genome-based predictions

Literature

References

#51677	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 33701
#68377	Automatically annotated from API NH .
#68382	Automatically annotated from API zym .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Haemophilus somnus (CCUG 33701)

Name and taxonomic classification

Morphology

Culture and growth conditions