[Ref.: #9006] |
Sample type/isolated from |
bovine mastitis |
|
[Ref.: #50898] |
Sample type/isolated from |
Mastitis |
[Ref.: #50898] |
Sampling date |
1973 |
|
[Ref.: #67770] |
Sample type/isolated from |
Bovine mastitis |
|
[Ref.: #119536] |
Sample type/isolated from |
Animal, Bovine mastitis |
[Ref.: #119536] |
Isolation date |
1973 |
* marker position based on {}
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Isolation sources categories |
#Host |
#Mammals |
#Bovinae (Cow, Cattle) |
#Infection |
#Disease |
- |
#Infection |
#Inflammation |
- |
#Host Body-Site |
#Organ |
#Mammary gland |
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-
Information on genomic background e.g. entries in nucleic sequence databass Sequence information
|
16S Sequence information: |
Only first 5 entries are displayed. Click here to see all.Click here to see only first 5 entries. |
|
|
Sequence accession description |
Seq. accession number |
Sequence length (bp) |
Sequence database |
Associated NCBI tax ID |
|
[Ref.: #67770] |
Lactococcus garvieae gene for 16S ribosomal RNA, partial sequence, strain: JCM 12256 |
LC145570 |
1488 |
|
1363 tax ID |
[Ref.: #67770] |
Lactococcus garvieae gene for 16S ribosomal RNA, partial sequence, strain: JCM 10343 |
LC096229 |
1458 |
|
1363 tax ID |
[Ref.: #20218] |
Lactococcus garvieae culture-collection CECT:4531 16S ribosomal RNA gene, partial sequence |
KF012886 |
805 |
|
1363 tax ID |
* |
[Ref.: #20218] |
Lactococcus garvieae strain DSM 20684 16S-23S intergenic spacer region, and tRNA-Ala gene, complete sequence |
AF225967 |
350 |
|
1363 tax ID |
* |
[Ref.: #20218] |
Lactococcus garvieae gene for 16S rRNA, partial sequence, strain: JCM 10343 |
AB598994 |
1510 |
|
1363 tax ID |
* |
[Ref.: #20218] |
Lactococcus garvieae strain KCTC 3772 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence |
HM241913 |
560 |
|
1363 tax ID |
* |
[Ref.: #20218] |
Lactococcus garvieae strain NIZO2415T 16S ribosomal RNA gene, partial sequence |
EU091459 |
652 |
|
1363 tax ID |
* |
[Ref.: #20218] |
Lactococcus garvieae gene for 16S rRNA, partial sequence, strain: NBRC 100934 |
AB681296 |
1474 |
|
1363 tax ID |
* |
|
|
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Availability in culture collections External links
[Ref.: #9006] |
Culture collection no. |
DSM 20684, ATCC 43921, JCM 10343, NCDO 2155, CCUG 32208, NCIMB 702155, BCRC 17074, CECT 4531, CIP 102507, HAMBI 1592, JCM 12256, KCTC 3772, LMG 8893, NBRC 100934, NCFB 2155, LMG 9893 |
[Ref.: #83812] |
SI-ID 3390
|
* |
|
Literature: |
|
Topic |
Title |
Authors |
Journal |
DOI |
Year |
|
Phylogeny |
Lactococcus garvieae subsp. bovis subsp. nov., lactic acid bacteria isolated from wild gaur (Bos gaurus) dung, and description of Lactococcus garvieae subsp. garvieae subsp. nov. |
Varsha KK, Nampoothiri KM |
Int J Syst Evol Microbiol |
10.1099/ijsem.0.001268 |
2016 |
* |
|
- References
-
#9006 |
Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ;
DSM 20684
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-
-
-
#38974 |
; Curators of the CIP;
|
-
#50898 |
Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG;
CCUG 32208
|
-
-
#67770 |
Japan Collection of Microorganism (JCM) ; Curators of the JCM;
|
-
#68371 |
Automatically annotated from API 50CH acid .
|
-
#68381 |
Automatically annotated from API rID32STR .
|
-
#68382 |
Automatically annotated from API zym .
|
-
#69479 |
João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.:
MicrobeAtlas 1.0 beta
.
|
-
-
-
#83812 |
Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.:
StrainInfo: A central database for resolving microbial strain identifiers
.
(
DOI 10.60712/SI-ID3390.1 )
|
-
#119536 |
Collection of Institut Pasteur ; Curators of the CIP;
CIP 102507
|
- * These data were automatically processed and therefore are not curated
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