Name: Staphylococcus condimenti F-8
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 14633

Type strain:

Species: Staphylococcus condimenti

Strain Designation: F-8

Culture col. no.: DSM 11675, JCM 6911

Strain history: S. Tanasupawat F8.

NCBI tax ID(s): 70255 (species)

SI-ID 49152

DSM 11675, JCM 6911

Other strains from Staphylococcus condimenti

S. condimenti F-2, DSM 11674, JCM 6074, CCUG ... (type strain)
S. condimenti St_T3, DSM 110305

Section

Staphylococcus condimenti F-8 is a mesophilic, Gram-positive bacterium that was isolated from soy sauce mash.

Gram-positive
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Caryophanales*
	Family	*Staphylococcaceae*
	Genus	*Staphylococcus*
	Species	**Staphylococcus condimenti**
	Full Scientific Name (LPSN)	Staphylococcus condimenti Probst et al. 1998

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	positive Confidence in %100

Information on culture and growth conditions Culture and growth conditions

[Ref.: #4439]

Culture medium

TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)

[Ref.: #4439]

Culture medium growth

[Ref.: #4439]

Culture medium link

Medium recipe at MediaDive

[Ref.: #4439]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #4439]			growth	37 °C
[Ref.: #67770]			growth	30 °C

[Ref.: #4439]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69481]	Ability of spore formation	no Confidence in %92
[Ref.: #69480]	Ability of spore formation	no Confidence in %99.459

[Ref.: #67770]

Observation

quinones: MK-7

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #4439]	Sample type/isolated from	soy sauce mash
[Ref.: #4439]	Country	Japan
[Ref.: #4439]	Country ISO 3 Code	JPN
[Ref.: #4439]	Continent	Asia

[Ref.: #67770]	Sample type/isolated from	Soy-sauce mash
* marker position based on {}

Isolation sources categories

#Engineered

#Food production

#Food

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence LC379100 (>99% sequence identity) for Staphylococcus from Microbeatlas

Aquatic Samples	1299
Soil Samples	1443
Animal Samples	19130
Plant Samples	632
Total Samples	22504

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #4439]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Staphylococcus condimenti gene for 16S rRNA, partial sequence, strain: JCM 6911	LC379100	1474	ENA	70255 tax ID
[Ref.: #20218]	Staphylococcus condimenti strain DSM 11675 16S ribosomal RNA gene, partial sequence	AY688049	464	ENA	70255 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Staphylococcus condimenti strain FDAARGOS_1205	70255.24	complete	PATRIC	70255 tax ID	*

[Ref.: #67770]

GC-content

36 mol%

high performance liquid chromatography (HPLC)

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Staphylococcus condimenti strain FDAARGOS_1205 strain Not applicable PATRIC: 70255.24
[Ref.: #69481]	spore-forming	no	92	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Staphylococcus condimenti strain FDAARGOS_1205 strain Not applicable PATRIC: 70255.24
[Ref.: #69480]	gram-positive	yes	88.943	no
[Ref.: #69480]	anaerobic	no	98.914	no
[Ref.: #69480]	halophile	yes	92.364	no
[Ref.: #69480]	spore-forming	no	91.741	no
[Ref.: #69480]	glucose-util	yes	88.599	no
[Ref.: #69480]	thermophile	no	99.787	yes
[Ref.: #69480]	flagellated	no	85.475	no
[Ref.: #69480]	motile	no	86.664	no
[Ref.: #69480]	aerobic	yes	89.412	no
[Ref.: #69480]	glucose-ferment	yes	81.93	no

Availability in culture collections External links

[Ref.: #4439]

Culture collection no.

DSM 11675, JCM 6911

[Ref.: #83761]

SI-ID 49152

References

#4439

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 11675

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#83761

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID49152.1 )

* These data were automatically processed and therefore are not curated

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Staphylococcus condimenti strain FDAARGOS_1205 strain Not applicable

Staphylococcus condimenti strain FDAARGOS_1205 strain Not applicable

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