Citrobacter amalonaticus (CCUG 29875)

Name: Citrobacter amalonaticus (CCUG 29875)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 145881

Type strain

Culture col. no. CCUG 29875

NCBI tax ID(s) 35703

Special Collections CCUG

Links

Citrobacter amalonaticus CCUG 29875 is a bacterium that was isolated from Human stool.

Bacteria

Name and taxonomic classification

SI-ID 52778

CCUG 29875

@ref 20215

Last LPSN update 2026-05-29 08:41:02

Domain Bacteria

Phylum Pseudomonadota

Class Gammaproteobacteria

Order Enterobacterales

Family Enterobacteriaceae

Genus Citrobacter

Species Citrobacter amalonaticus

Full scientific name Citrobacter amalonaticus (Young et al. 1971) Brenner and Farmer 1982

Synonyms (1)

Levinea amalonatica

BacDive ID	Other strains from **Citrobacter amalonaticus** (14)	Type strain
4323	C. amalonaticus CCUG 4860, CECT 863, DSM 4593, ATCC 25405, ... (type strain)
130907	C. amalonaticus G, DSM 17342
136361	C. amalonaticus 1444-80, CIP 104932
136366	C. amalonaticus 3314-73, CIP 105011
136525	C. amalonaticus 9542, CIP 106468, ATCC 25406, NCTC 10806
144787	C. amalonaticus CCUG 26551
145874	C. amalonaticus CCUG 29868
145875	C. amalonaticus CCUG 29869
145876	C. amalonaticus CCUG 29870
145879	C. amalonaticus CCUG 29873
145880	C. amalonaticus CCUG 29874
145882	C. amalonaticus CCUG 29876
145884	C. amalonaticus CCUG 29878
171065	C. amalonaticus UPEC_105.165.0411, CRBIP19.236

Morphology

Culture and growth conditions

Physiology and metabolism

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68374	29016 ChEBI	arginine	-	hydrolysis	from API ID32E
68374	17057 ChEBI	cellobiose	+	builds acid from	from API ID32E
68374	18333 ChEBI	D-arabitol	-	builds acid from	from API ID32E
68374	18024 ChEBI	D-galacturonic acid	+	builds acid from	from API ID32E
68374	17634 ChEBI	D-glucose	+	builds acid from	from API ID32E
68374	16899 ChEBI	D-mannitol	+	builds acid from	from API ID32E
68374	30849 ChEBI	L-arabinose	+	builds acid from	from API ID32E
68374	18403 ChEBI	L-arabitol	-	builds acid from	from API ID32E
68374	62345 ChEBI	L-rhamnose	+	builds acid from	from API ID32E
68374	25094 ChEBI	lysine	-	degradation	from API ID32E
68374	15792 ChEBI	malonate	-	assimilation	from API ID32E
68374	17306 ChEBI	maltose	+	builds acid from	from API ID32E
68374	17268 ChEBI	myo-inositol	-	builds acid from	from API ID32E
68374	18257 ChEBI	ornithine	+	degradation	from API ID32E
68374	18394 ChEBI	palatinose	-	builds acid from	from API ID32E
68374	0 ChEBI	Potassium 5-ketogluconate	+	builds acid from	from API ID32E
68374	15963 ChEBI	ribitol	-	builds acid from	from API ID32E
68374	30911 ChEBI	sorbitol	+	builds acid from	from API ID32E
68374	17992 ChEBI	sucrose	-	builds acid from	from API ID32E
68374	27082 ChEBI	trehalose	+	builds acid from	from API ID32E
68374	27897 ChEBI	tryptophan	+	energy source	from API ID32E
68374	16199 ChEBI	urea	-	hydrolysis	from API ID32E

Metabolite production

@ref	Chebi-ID	Metabolite	Production
68374	35581 ChEBI	indole		from API ID32E

Metabolite tests

@ref	Chebi-ID	Metabolite	Indole test
68374	35581 ChEBI	indole	+	from API ID32E

Enzymes

@ref	Value	Activity	Ec
68374	alpha-galactosidase	-	3.2.1.22	from API ID32E
68374	alpha-glucosidase	-	3.2.1.20	from API ID32E
68374	alpha-maltosidase	-		from API ID32E
68374	arginine dihydrolase	-	3.5.3.6	from API ID32E
68374	beta-galactosidase	+	3.2.1.23	from API ID32E
68374	beta-glucosidase	+	3.2.1.21	from API ID32E
68374	beta-glucuronidase	-	3.2.1.31	from API ID32E
68374	L-aspartate arylamidase	+	3.4.11.21	from API ID32E
68374	lipase	-		from API ID32E
68374	lysine decarboxylase	-	4.1.1.18	from API ID32E
68374	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API ID32E
68374	ornithine decarboxylase	+	4.1.1.17	from API ID32E
68374	urease	-	3.5.1.5	from API ID32E

API ID32E

@ref	ODC	ADH (Arg)	LDC (Lys)	URE	LARL	GAT	5KG	LipaseLIP	Phenol red (Acidification)RP	beta GLU	MAN	MAL	ADO	PLE	beta GUR	MNT	IND	N-Acetyl-beta-Glucosaminidasebeta NAG	beta GAL	GLU	SAC	LARA	DARL	alpha GLU	alpha GAL	TRE	RHA	INO	CEL	SOR	alpha-MaltosidasealphaMAL	L-aspartic acid arylamidaseAspA
49779	+	-	-	-	-	+	+	-	-	+	+	+	-	-	-	-	+	-	+	+	-	+	-	-	-	+	+	-	+	+	-	+

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host Body Product	#Gastrointestinal tract	#Feces (Stool)
#Host	#Human	-

Isolation

@ref	Sample type	Host species	Geographic location	Country	Continent
49779	Human stool	Homo sapiens	Prague,IHE	Czechoslovakia	Europe

Interaction and safety

Sequence information

Genome-based predictions

Literature

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#49779	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 29875
#68374	Automatically annotated from API ID32E .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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