Name: Geobacillus thermodenitrificans subsp. calidus F84b
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 1458

Type strain:

Species: Geobacillus thermodenitrificans subsp. calidus

Strain Designation: F84b

Culture col. no.: DSM 22629, NCIMB 14582

Strain history: <- A. Coleri Cihan, Faculty of Sci., Ankara Univ., Turkey; F84b

NCBI tax ID(s): 504926 (subspecies)

SI-ID 407814

DSM 22629

Special Collections

DSMZ

Other strains from Geobacillus thermodenitrificans subsp. calidus

Section

When using BacDive for research please cite our paper

Geobacillus thermodenitrificans subsp. calidus F84b is a thermophilic bacterium that was isolated from high-temperature well-pipeline sediment .

thermophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	09-12-2024 (DD-MM-YYYY)
	Domain	*Bacteria*
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Caryophanales*
	Family	*Bacillaceae*
	Genus	*Geobacillus*
	Species	**Geobacillus thermodenitrificans subsp. calidus**
	Full Scientific Name (LPSN)	Geobacillus thermodenitrificans subsp. calidus Cihan et al. 2011

Information on culture and growth conditions Culture and growth conditions

[Ref.: #16438]

Culture medium

NUTRIENT AGAR (DSMZ Medium 1)

[Ref.: #16438]

Culture medium growth

[Ref.: #16438]

Culture medium link

Medium recipe at MediaDive

[Ref.: #16438]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #16438]			growth	60 °C

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #16438]	Sample type/isolated from	high-temperature well-pipeline sediment (98°C, pH 7.0-7.5)
[Ref.: #16438]	Geographic location (country and/or sea, region)	Ankara, Kizilcahamam Province
[Ref.: #16438]	Country	Turkey
[Ref.: #16438]	Country ISO 3 Code	TUR
[Ref.: #16438]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Engineered	#Industrial	#Engineered product
#Environmental	#Aquatic	#Sediment
#Condition	#Thermophilic (>45°C)	-

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence EU477773 (>99% sequence identity) for Geobacillus from Microbeatlas

Aquatic Samples	1277
Soil Samples	2618
Animal Samples	3638
Plant Samples	757
Total Samples	8290

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #16438]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #16438]	Geobacillus thermodenitrificans subsp. calidus strain F84b 16S ribosomal RNA gene, complete sequence	EU477773	1400	GenBank ENA	504926 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Geobacillus thermodenitrificans DSM 22629	2829860437	draft	JGI IMG/M	33940 tax ID	*

[Ref.: #16438]

GC-content

49.6 mol%

high performance liquid chromatography (HPLC)

Availability in culture collections External links

[Ref.: #16438]

Culture collection no.

DSM 22629, NCIMB 14582

[Ref.: #71105]

SI-ID 407814

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Geobacillus thermodenitrificans subsp. calidus, subsp. nov., a thermophilic and alpha-glucosidase producing bacterium isolated from Kizilcahamam, Turkey.	Cihan AC, Ozcan B, Tekin N, Cokmus C	J Gen Appl Microbiol	10.2323/jgam.57.83	2011	*

References

#16438

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 22629

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#71105

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID407814.1 )

* These data were automatically processed and therefore are not curated

Change proposal

You found an error in BacDive? Please tell us about it!

Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.

Search for species Geobacillus thermodenitrificans subsp. calidus in external resources:
SILVA
BRENDA
PANGAEA
GBIF