Staphylococcus simulans MK 148 is an aerobe, mesophilic, Gram-negative prokaryote that was isolated from human skin.
Gram-negative coccus-shaped aerobe mesophilic genome sequence 16S sequence| @ref 20215 |
|
|
| Domain Bacteria |
| Phylum Bacillota |
| Class Bacilli |
| Order Caryophanales |
| Family Staphylococcaceae |
| Genus Staphylococcus |
| Species Staphylococcus simulans |
| Full scientific name Staphylococcus simulans Kloos and Schleifer 1975 (Approved Lists 1980) |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 8713 | COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) | Medium recipe at MediaDive | Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base | ||
| 8713 | TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) | Medium recipe at MediaDive | Name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Yeast extract 3.0 g/l Distilled water | ||
| 34889 | MEDIUM 3 - Columbia agar | Columbia agar (39.000 g);distilled water (1000.000 ml) | |||
| 122626 | CIP Medium 3 | Medium recipe at CIP |
| Test 1 | Test 2 | Test 3 | Test 4 | |
|---|---|---|---|---|
| @ref | 8713 | 8713 | 8713 | 8713 |
| Medium | Mueller-Hinton Agar | Mueller-Hinton Agar | Mueller-Hinton Agar | Müller-Hinton Agar |
| Manual annotation | 1 | 1 | 1 | 1 |
| Inhibition zone diameter in mm | Inhibition zone diameter in mm | Inhibition zone diameter in mm | Inhibition zone diameter in mm | |
| Amikacin 30µg (disc) | 34 | 32 | 32 | 36 |
| Ampicillin 10µg (disc) | 38 | 30 | 30 | 28 |
| Aztreonam 30µg (disc) | 0 | 0 | 0 | 0 |
| Bacitracin 10Unit | 20-22 | 18 | 16-18 | n.d. |
| Cefalotin 30µg (disc) | 44 | 40 | 38 | n.d. |
| Cefazolin 30µg (disc) | 42 | 40 | 36-38 | n.d. |
| Cefiderocol 30µg (disc) | n.d. | n.d. | n.d. | 16-18 |
| Cefotaxime 30µg (disc) | 36-38 | 32-34 | 30 | 32 |
| Ceftazidime 10µg (disc) | n.d. | n.d. | n.d. | 22 |
| Ceftriaxone 30µg (disc) | 34 | n.d. | n.d. | 30 |
| Chloramphenicol 30µg (disc) | 32 | 30-32 | 30 | 36 |
| Ciprofloxacin 5µg (disc) | n.d. | n.d. | n.d. | 42 |
| Clindamycin 10µg (disc) | 42 | n.d. | n.d. | 46 |
| Colistin 10µg (disc) | 12 | 14 | 12-14 | n.d. |
| Colistin sulphate 10µg (disc) | n.d. | n.d. | n.d. | 16 |
| Doxycycline 30µg (disc) | 18 | 18 | 18 | n.d. |
| Erythromycin 15µg (disc) | 32-34 | 32 | 32 | 38 |
| Fosfomycin 50µg (disc) | >50 | n.d. | n.d. | 44 |
| Gentamicin 30µg (disc) | n.d. | n.d. | n.d. | 38 |
| Gentamycin 10µg (disc) | n.d. | |||
| Imipenem 10µg (disc) | >50 | >50 | 50 | >50 |
| Kanamycin 30µg (disc) | 36 | 42-44 | 30 | 36 |
| Levofloxacin 5µg (disc) | n.d. | n.d. | n.d. | 40 |
| Lincomycin 15µg (disc) | 38 | 34 | 36 | n.d. |
| Linezolid 10µg (disc) | 38 | n.d. | n.d. | 42 |
| Meropenem 10µg (disc) | n.d. | n.d. | n.d. | 46-48 |
| Mezlocillin 30µg (disc) | 34 | 30 | 28 | n.d. |
| Moxifloxacin 5µg (disc) | 40 | n.d. | n.d. | 42 |
| Neomycin 30µg (disc) | 28 | 28 | 28 | n.d. |
| Nitrofurantoin 100µg (disc) | 30-32 | 26 | 26 | 26 |
| Norfloxacin 10µg (disc) | 36 | 38-40 | 36 | n.d. |
| Nystatin 100Unit | 0 | n.d. | n.d. | n.d. |
| Ofloxacin 5µg (disc) | 34 | 32 | 32 | 40 |
| Oxacillin 5µg (disc) | 38 | 32 | 32 | 38 |
| Penicillin G 6µg (disc) | 34 | 26-28 | 26 | 26 |
| Pipemidic acid 20µg (disc) | 22 | 22 | 22 | n.d. |
| Piperacillin/Tazobactam 40µg (disc) | 34-36 | n.d. | n.d. | n.d. |
| Piperacillin/Tazobactam 110µg (disc) | n.d. | n.d. | n.d. | 32 |
| Polymyxin B 300Unit | 16 | 16 | 14 | 18 |
| Quinupristin/Dalfopristin 15µg (disc) | 32 | n.d. | n.d. | 34 |
| Rifampicin 5µg (disc) | n.d. | n.d. | n.d. | 42 |
| Teicoplanin 30µg (disc) | 22-24 | n.d. | n.d. | 22 |
| Tetracycline 30µg (disc) | 10 | 10 | 10 | 12 |
| Ticarcillin 75µg (disc) | 38-40 | 32-34 | 30 | 30 |
| Tigecycline 15µg (disc) | n.d. | n.d. | n.d. | 32 |
| Trimethoprim-sulfamethoxazole (1:19) 10µg (disc) | n.d. | n.d. | n.d. | 28 |
| Vancomycin 30µg (disc) | 22-24 | 20-22 | 22 | 24 |
| @ref | Spore formation | Confidence | |
|---|---|---|---|
| 125439 | 97.5 |
| @ref | Murein short key | Type | |
|---|---|---|---|
| 8713 | A11.02 | A3alpha L-Lys-Gly5-6 |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 68371 | 27613 ChEBI | amygdalin | - | builds acid from | from API 50CH acid |
| 68375 | 22599 ChEBI | arabinose | - | fermentation | from API ID32STA |
| 68371 | 18305 ChEBI | arbutin | - | builds acid from | from API 50CH acid |
| 68371 | 17057 ChEBI | cellobiose | - | builds acid from | from API 50CH acid |
| 68371 | 17108 ChEBI | D-arabinose | - | builds acid from | from API 50CH acid |
| 68371 | 18333 ChEBI | D-arabitol | - | builds acid from | from API 50CH acid |
| 68375 | 15824 ChEBI | D-fructose | + | fermentation | from API ID32STA |
| 68371 | 15824 ChEBI | D-fructose | + | builds acid from | from API 50CH acid |
| 68371 | 28847 ChEBI | D-fucose | - | builds acid from | from API 50CH acid |
| 68371 | 12936 ChEBI | D-galactose | - | builds acid from | from API 50CH acid |
| 68375 | 17634 ChEBI | D-glucose | + | fermentation | from API ID32STA |
| 68371 | 17634 ChEBI | D-glucose | + | builds acid from | from API 50CH acid |
| 68371 | 62318 ChEBI | D-lyxose | - | builds acid from | from API 50CH acid |
| 68375 | 16899 ChEBI | D-mannitol | + | fermentation | from API ID32STA |
| 68371 | 16899 ChEBI | D-mannitol | - | builds acid from | from API 50CH acid |
| 68371 | 16024 ChEBI | D-mannose | - | builds acid from | from API 50CH acid |
| 68371 | 17924 ChEBI | D-sorbitol | - | builds acid from | from API 50CH acid |
| 68371 | 16443 ChEBI | D-tagatose | - | builds acid from | from API 50CH acid |
| 68371 | 65327 ChEBI | D-xylose | - | builds acid from | from API 50CH acid |
| 68371 | 17113 ChEBI | erythritol | - | builds acid from | from API 50CH acid |
| 68375 | 4853 ChEBI | esculin | - | hydrolysis | from API ID32STA |
| 68371 | 4853 ChEBI | esculin | - | builds acid from | from API 50CH acid |
| 68371 | 16813 ChEBI | galactitol | - | builds acid from | from API 50CH acid |
| 68371 | 28066 ChEBI | gentiobiose | - | builds acid from | from API 50CH acid |
| 68371 | 24265 ChEBI | gluconate | - | builds acid from | from API 50CH acid |
| 68371 | 17754 ChEBI | glycerol | - | builds acid from | from API 50CH acid |
| 68371 | 28087 ChEBI | glycogen | - | builds acid from | from API 50CH acid |
| 122626 | 606565 ChEBI | hippurate | + | hydrolysis | |
| 68371 | 15443 ChEBI | inulin | - | builds acid from | from API 50CH acid |
| 68371 | 30849 ChEBI | L-arabinose | - | builds acid from | from API 50CH acid |
| 68371 | 18403 ChEBI | L-arabitol | - | builds acid from | from API 50CH acid |
| 68371 | 18287 ChEBI | L-fucose | - | builds acid from | from API 50CH acid |
| 68371 | 62345 ChEBI | L-rhamnose | - | builds acid from | from API 50CH acid |
| 68371 | 17266 ChEBI | L-sorbose | - | builds acid from | from API 50CH acid |
| 68371 | 65328 ChEBI | L-xylose | - | builds acid from | from API 50CH acid |
| 68375 | 17716 ChEBI | lactose | + | fermentation | from API ID32STA |
| 68371 | 17716 ChEBI | lactose | + | builds acid from | from API 50CH acid |
| 68371 | 17306 ChEBI | maltose | - | builds acid from | from API 50CH acid |
| 68371 | 6731 ChEBI | melezitose | - | builds acid from | from API 50CH acid |
| 68371 | 28053 ChEBI | melibiose | - | builds acid from | from API 50CH acid |
| 68371 | 320061 ChEBI | methyl alpha-D-glucopyranoside | - | builds acid from | from API 50CH acid |
| 68371 | 43943 ChEBI | methyl alpha-D-mannoside | - | builds acid from | from API 50CH acid |
| 68371 | 74863 ChEBI | methyl beta-D-xylopyranoside | - | builds acid from | from API 50CH acid |
| 68371 | 17268 ChEBI | myo-inositol | - | builds acid from | from API 50CH acid |
| 68375 | 59640 ChEBI | N-acetylglucosamine | + | fermentation | from API ID32STA |
| 68371 | 59640 ChEBI | N-acetylglucosamine | + | builds acid from | from API 50CH acid |
| 68375 | 17632 ChEBI | nitrate | + | reduction | from API ID32STA |
| 122626 | 17632 ChEBI | nitrate | + | reduction | |
| 122626 | 16301 ChEBI | nitrite | - | reduction | |
| 68375 | 18257 ChEBI | ornithine | - | degradation | from API ID32STA |
| 68371 | Potassium 2-ketogluconate | - | builds acid from | from API 50CH acid | |
| 68371 | Potassium 5-ketogluconate | - | builds acid from | from API 50CH acid | |
| 68375 | 16634 ChEBI | raffinose | - | fermentation | from API ID32STA |
| 68371 | 16634 ChEBI | raffinose | - | builds acid from | from API 50CH acid |
| 68371 | 15963 ChEBI | ribitol | - | builds acid from | from API 50CH acid |
| 68371 | 17814 ChEBI | salicin | - | builds acid from | from API 50CH acid |
| 68371 | 28017 ChEBI | starch | - | builds acid from | from API 50CH acid |
| 68371 | 17992 ChEBI | sucrose | + | builds acid from | from API 50CH acid |
| 68375 | 17992 ChEBI | sucrose | + | fermentation | from API ID32STA |
| 68375 | 27082 ChEBI | trehalose | + | fermentation | from API ID32STA |
| 68371 | 27082 ChEBI | trehalose | + | builds acid from | from API 50CH acid |
| 68375 | 32528 ChEBI | turanose | - | fermentation | from API ID32STA |
| 68371 | 32528 ChEBI | turanose | - | builds acid from | from API 50CH acid |
| 68375 | 16199 ChEBI | urea | + | hydrolysis | from API ID32STA |
| 68371 | 17151 ChEBI | xylitol | - | builds acid from | from API 50CH acid |
| @ref | ChEBI | Metabolite | Is resistant | Resistance conc. | |
|---|---|---|---|---|---|
| 8713 | 161680 | Aztreonam | 30 µg (disc) | from Antibiotic test | |
| 8713 | 7660 | Nystatin | 100 Unit | from Antibiotic test |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68382 | acid phosphatase | + | 3.1.3.2 | from API zym |
| 122626 | alcohol dehydrogenase | + | 1.1.1.1 | |
| 68382 | alkaline phosphatase | - | 3.1.3.1 | from API zym |
| 68382 | alpha-chymotrypsin | - | 3.4.21.1 | from API zym |
| 68382 | alpha-fucosidase | - | 3.2.1.51 | from API zym |
| 68382 | alpha-galactosidase | - | 3.2.1.22 | from API zym |
| 68382 | alpha-glucosidase | + | 3.2.1.20 | from API zym |
| 68382 | alpha-mannosidase | - | 3.2.1.24 | from API zym |
| 122626 | amylase | - | ||
| 68382 | beta-galactosidase | + | 3.2.1.23 | from API zym |
| 122626 | beta-galactosidase | + | 3.2.1.23 | |
| 68375 | beta-galactosidase | + | 3.2.1.23 | from API ID32STA |
| 68382 | beta-glucosidase | - | 3.2.1.21 | from API zym |
| 68375 | beta-glucosidase | - | 3.2.1.21 | from API ID32STA |
| 68382 | beta-glucuronidase | + | 3.2.1.31 | from API zym |
| 68375 | beta-glucuronidase | + | 3.2.1.31 | from API ID32STA |
| 122626 | caseinase | - | 3.4.21.50 | |
| 8713 | catalase | + | 1.11.1.6 | |
| 122626 | catalase | + | 1.11.1.6 | |
| 122626 | coagulase | - | ||
| 68382 | cystine arylamidase | - | 3.4.11.3 | from API zym |
| 8713 | cytochrome-c oxidase | - | 1.9.3.1 | |
| 122626 | DNase | +/- | ||
| 68382 | esterase (C 4) | + | from API zym | |
| 68382 | esterase lipase (C 8) | + | from API zym | |
| 122626 | gamma-glutamyltransferase | - | 2.3.2.2 | |
| 122626 | gelatinase | - | ||
| 68375 | L-arginine arylamidase | - | from API ID32STA | |
| 122626 | lecithinase | + | ||
| 68382 | leucine arylamidase | - | 3.4.11.1 | from API zym |
| 122626 | lipase | - | ||
| 68382 | lipase (C 14) | - | from API zym | |
| 122626 | lysine decarboxylase | - | 4.1.1.18 | |
| 68382 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | from API zym |
| 68382 | naphthol-AS-BI-phosphohydrolase | - | from API zym | |
| 122626 | ornithine decarboxylase | - | 4.1.1.17 | |
| 68375 | ornithine decarboxylase | - | 4.1.1.17 | from API ID32STA |
| 122626 | oxidase | - | ||
| 122626 | phenylalanine ammonia-lyase | - | 4.3.1.24 | |
| 122626 | protease | + | ||
| 68382 | trypsin | - | 3.4.21.4 | from API zym |
| 122626 | tween esterase | - | ||
| 122626 | urease | + | 3.5.1.5 | |
| 68375 | urease | + | 3.5.1.5 | from API ID32STA |
| 68382 | valine arylamidase | - | from API zym |
| @ref | ControlQ | GLY | ERY | DARA | LARA | RIB | DXYL | LXYL | ADO | MDX | GAL | GLU | FRU | MNE | SBE | RHA | DUL | INO | MAN | SOR | MDM | MDG | NAG | AMY | ARB | ESC | SAL | CEL | MAL | LAC | MEL | SAC | TRE | INU | MLZ | RAF | AMD | GLYG | XLT | GEN | TUR | LYX | TAG | DFUC | LFUC | DARL | LARL | GNT | 2KG | 5KG | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 122626 | not determinedn.d. | - | - | - | - | +/- | - | - | - | - | - | + | + | - | - | - | - | - | - | - | - | - | + | - | - | - | - | - | - | + | - | + | + | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| @ref | URE | ADH (Arg) | ODC | ESC | GLU | FRU | MNE | MAL | LAC | TRE | MAN | RAF | RIB | CEL | Reduction of nitrateNIT | Acetoin production (Voges Proskauer test)VP | beta GAL | L-arginine arylamidaseArgA | PAL | Pyrrolidonyl arylamidasePyrA | NOVO | SAC | NAG | TUR | ARA | beta GUR | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 8713 | + | + | - | - | + | + | - | - | + | + | + | - | - | - | + | - | + | - | - | + | - | + | + | - | - | + | |
| 8713 | + | + | - | - | + | + | - | - | + | + | + | - | +/- | - | + | - | + | - | +/- | + | +/- | + | + | - | - | + | |
| 8713 | + | + | - | - | + | + | - | - | + | + | + | - | - | - | + | - | + | - | + | + | + | + | + | - | - | + | |
| 8713 | + | + | - | - | + | + | + | + | + | + | + | - | + | + | + | - | + | - | - | + | +/- | + | + | - | - | + | |
| 8713 | + | - | - | - | + | + | - | - | + | + | + | - | + | - | + | - | + | - | + | - | + | + | + | - | - | + | |
| 8713 | + | + | - | - | + | + | - | - | + | + | + | - | + | - | + | - | + | - | + | + | + | + | + | - | - | + | |
| 8713 | + | + | - | - | + | + | - | - | + | + | + | - | + | - | + | - | + | - | + | + | + | + | + | - | - | + | |
| 8713 | + | + | - | - | + | + | - | - | + | + | + | - | + | - | + | - | + | - | +/- | + | - | + | + | - | - | + |
Global distribution of 16S sequence D83373 (>99% sequence identity) for Staphylococcus from Microbeatlas ![]()
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 66792 | 40961_B01 assembly for Staphylococcus simulans NCTC11046 | complete | 1286 | 97.66 | ||||
| 66792 | Simulans assembly for Staphylococcus simulans | chromosome | 1286 | 82.14 | ||||
| 67770 | ASM290228v1 assembly for Staphylococcus simulans NCTC 11046 | scaffold | 1286 | 56.54 |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | oxygen_tolerance | BacteriaNetⓘ | aerobe | 87.10 | no |
| 125439 | gram_stain | BacteriaNetⓘ | positive | 70.80 | no |
| 125439 | motility | BacteriaNetⓘ | no | 74.00 | no |
| 125439 | spore_formation | BacteriaNetⓘ | no | 97.50 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | yes | 88.37 | no |
| 125438 | anaerobic | anaerobicⓘ | no | 98.80 | yes |
| 125438 | aerobic | aerobicⓘ | yes | 51.47 | no |
| 125438 | spore-forming | spore-formingⓘ | no | 70.06 | no |
| 125438 | thermophilic | thermophileⓘ | no | 94.50 | yes |
| 125438 | flagellated | motile2+ⓘ | no | 80.91 | no |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Phylogeny | Denaturing gradient gel electrophoresis analysis of the 16S rRNA gene V1 region to monitor dynamic changes in the bacterial population during fermentation of Italian sausages. | Cocolin L, Manzano M, Cantoni C, Comi G. | Appl Environ Microbiol | 10.1128/aem.67.11.5113-5121.2001 | 2001 | |
| Use of Ozone for Disinfection of PHARMODUCT® Automatic System for Antineoplastic Compounding. | Lovino V, Riglietti A, Tolomeo A, Capasso G, Di Vittorio M, Brattoli S, Tesse G, Dimiccoli V, Sparta M, Perioli L. | Pharmaceuticals (Basel) | 10.3390/ph18020140 | 2025 | ||
| Enzymology | Cloning and expression of Staphylococcus simulans lysostaphin enzyme gene in Bacillus subtilis WB600. | Far BE, Ragheb M, Rahbar R, Mafakher L, Nojookambari NY, Achinas S, Yazdansetad S. | AIMS Microbiol | 10.3934/microbiol.2021017 | 2021 | |
| Species identification by MALDI-TOF MS and gap PCR-RFLP of non-aureus Staphylococcus, Mammaliicoccus, and Streptococcus spp. associated with sheep and goat mastitis. | Rosa NM, Penati M, Fusar-Poli S, Addis MF, Tola S. | Vet Res | 10.1186/s13567-022-01102-4 | 2022 | ||
| Susceptibility to Bacteriocins in Biofilm-Forming, Variable Staphylococci Isolated from Local Slovak Ewes' Milk Lump Cheeses. | Laukova A, Pogany Simonova M, Fockova V, Kolosta M, Tomaska M, Dvoroznakova E. | Foods | 10.3390/foods9091335 | 2020 | ||
| Novel Peptide from Commensal Staphylococcus simulans Blocks Methicillin-Resistant Staphylococcus aureus Quorum Sensing and Protects Host Skin from Damage. | Brown MM, Kwiecinski JM, Cruz LM, Shahbandi A, Todd DA, Cech NB, Horswill AR. | Antimicrob Agents Chemother | 10.1128/aac.00172-20 | 2020 | ||
| Metabolism | Pathogenic conversion of coagulase-negative staphylococci. | Yu W, Kim HK, Rauch S, Schneewind O, Missiakas D. | Microbes Infect | 10.1016/j.micinf.2016.12.002 | 2017 | |
| Enzymology | Performance of SaSelect, a chromogenic medium for detection of staphylococci in clinical specimens. | Hirvonen JJ, Kerttula AM, Kaukoranta SS. | J Clin Microbiol | 10.1128/jcm.03129-13 | 2014 | |
| Phylogeny | Detection of methicillin-resistant Staphylococcus aureus by a duplex droplet digital PCR assay. | Kelley K, Cosman A, Belgrader P, Chapman B, Sullivan DC. | J Clin Microbiol | 10.1128/jcm.00196-13 | 2013 | |
| Phylogeny | Evaluation of a triplex PCR assay to discriminate Staphylococcus aureus from coagulase-negative Staphylococci and determine methicillin resistance from blood cultures. | Maes N, Magdalena J, Rottiers S, De Gheldre Y, Struelens MJ. | J Clin Microbiol | 10.1128/jcm.40.4.1514-1517.2002 | 2002 | |
| Phylogeny | Glyceraldehyde-3-phosphate dehydrogenase-encoding gene as a useful taxonomic tool for Staphylococcus spp. | Yugueros J, Temprano A, Berzal B, Sanchez M, Hernanz C, Luengo JM, Naharro G. | J Clin Microbiol | 10.1128/jcm.38.12.4351-4355.2000 | 2000 | |
| Enzymology | Development of a rapid PCR assay specific for Staphylococcus saprophyticus and application to direct detection from urine samples. | Martineau F, Picard FJ, Menard C, Roy PH, Ouellette M, Bergeron MG. | J Clin Microbiol | 10.1128/jcm.38.9.3280-3284.2000 | 2000 | |
| Enzymology | Microbial quality and direct PCR identification of lactic acid bacteria and nonpathogenic Staphylococci from artisanal low-acid sausages. | Aymerich T, Martin B, Garriga M, Hugas M. | Appl Environ Microbiol | 10.1128/aem.69.8.4583-4594.2003 | 2003 | |
| Identification of a methicillin-resistant strain of Staphylococcus caprae from a human clinical specimen. | Kanda K, Suzuki E, Hiramatsu K, Oguri T, Miura H, Ezaki T, Yokota T. | Antimicrob Agents Chemother | 10.1128/aac.35.1.174 | 1991 | ||
| Phylogeny | Evaluation of a rapid direct assay for identification of bacteria and the mec A and van genes from positive-testing blood cultures. | Eigner U, Weizenegger M, Fahr AM, Witte W. | J Clin Microbiol | 10.1128/jcm.43.10.5256-5262.2005 | 2005 | |
| Pathogenicity | Real-time PCR assay for detection of fluoroquinolone resistance associated with grlA mutations in Staphylococcus aureus. | Lapierre P, Huletsky A, Fortin V, Picard FJ, Roy PH, Ouellette M, Bergeron MG. | J Clin Microbiol | 10.1128/jcm.41.7.3246-3251.2003 | 2003 | |
| epr, which encodes glycylglycine endopeptidase resistance, is homologous to femAB and affects serine content of peptidoglycan cross bridges in Staphylococcus capitis and Staphylococcus aureus. | Sugai M, Fujiwara T, Ohta K, Komatsuzawa H, Ohara M, Suginaka H. | J Bacteriol | 10.1128/jb.179.13.4311-4318.1997 | 1997 | ||
| Metabolism | EssD, a Nuclease Effector of the Staphylococcus aureus ESS Pathway. | Ohr RJ, Anderson M, Shi M, Schneewind O, Missiakas D. | J Bacteriol | 10.1128/jb.00528-16 | 2017 | |
| Phylogeny | Development of a PCR assay for identification of staphylococci at genus and species levels. | Martineau F, Picard FJ, Ke D, Paradis S, Roy PH, Ouellette M, Bergeron MG. | J Clin Microbiol | 10.1128/jcm.39.7.2541-2547.2001 | 2001 | |
| Enzymology | Evaluation of the Staph-Zym system with staphylococci isolated from bovine intramammary infections. | Watts JL, Washburn PJ. | J Clin Microbiol | 10.1128/jcm.29.1.59-61.1991 | 1991 | |
| Enzymology | Use of tuf sequences for genus-specific PCR detection and phylogenetic analysis of 28 streptococcal species. | Picard FJ, Ke D, Boudreau DK, Boissinot M, Huletsky A, Richard D, Ouellette M, Roy PH, Bergeron MG. | J Clin Microbiol | 10.1128/jcm.42.8.3686-3695.2004 | 2004 | |
| Enzymology | Rapid concentration and molecular enrichment approach for sensitive detection of Escherichia coli and Shigella species in potable water samples. | Maheux AF, Bissonnette L, Boissinot M, Bernier JL, Huppe V, Picard FJ, Berube E, Bergeron MG. | Appl Environ Microbiol | 10.1128/aem.02337-10 | 2011 | |
| Phylogeny | Lysostaphin disk test for routine presumptive identification of staphylococci. | Poutrel B, Caffin JP. | J Clin Microbiol | 10.1128/jcm.13.6.1023-1025.1981 | 1981 | |
| Development of a PCR assay for rapid detection of enterococci. | Ke D, Picard FJ, Martineau F, Menard C, Roy PH, Ouellette M, Bergeron MG. | J Clin Microbiol | 10.1128/jcm.37.11.3497-3503.1999 | 1999 | ||
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| Metabolism | Choriogonadotropin-like antigen in a strain of Streptococcus faecalis and a strain of Staphylococcus simulans: detection, identification, and characterization. | Acevedo HF, Koide SS, Slifkin M, Maruo T, Campbell-Acevedo EA. | Infect Immun | 10.1128/iai.31.1.487-494.1981 | 1981 | |
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| Evaluation of the Minitek gram-positive set for identification of staphylococci isolated from the bovine mammary gland. | Watts JL, Owens WE, Nickerson SC. | J Clin Microbiol | 10.1128/jcm.23.5.873-875.1986 | 1986 | ||
| Phylogeny | Rapid test for the serological separation of staphylococci from micrococci. | Seidl PH, Schleifer KH. | Appl Environ Microbiol | 10.1128/aem.35.3.479-482.1978 | 1978 | |
| Novel staphylococcal glycosyltransferases SdgA and SdgB mediate immunogenicity and protection of virulence-associated cell wall proteins. | Hazenbos WL, Kajihara KK, Vandlen R, Morisaki JH, Lehar SM, Kwakkenbos MJ, Beaumont T, Bakker AQ, Phung Q, Swem LR, Ramakrishnan S, Kim J, Xu M, Shah IM, Diep BA, Sai T, Sebrell A, Khalfin Y, Oh A, Koth C, Lin SJ, Lee BC, Strandh M, Koefoed K, Andersen PS, Spits H, Brown EJ, Tan MW, Mariathasan S. | PLoS Pathog | 10.1371/journal.ppat.1003653 | 2013 | ||
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| #8713 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 20322 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 ) |
| #34889 | ; Curators of the CIP; |
| #44978 | Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 7327 A |
| #66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . |
| #67770 | Japan Collection of Microorganism (JCM) ; Curators of the JCM; |
| #68371 | Automatically annotated from API 50CH acid . |
| #68375 | Automatically annotated from API ID32STA . |
| #68382 | Automatically annotated from API zym . |
| #69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta . |
| #122626 | Collection of Institut Pasteur ; Curators of the CIP; CIP 81.64 |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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