Cite this strain

Shigella sonnei (CCUG 26684)

Name: Shigella sonnei (CCUG 26684)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 144829

Type strain

Culture col. no. CCUG 26684

NCBI tax ID(s) 624

Special Collections CCUG

Links

Shigella sonnei CCUG 26684 is a prokaryote that was isolated from Human feces,27-yr-old man.

Name and taxonomic classification

SI-ID 57031

CCUG 26684

@ref 20215

Last LPSN update 2025-12-16 10:04:42

Domain Pseudomonadati

Phylum Pseudomonadota

Class Gammaproteobacteria

Order Enterobacterales

Family Enterobacteriaceae

Genus Shigella

Species Shigella sonnei

Full scientific name Shigella sonnei (Levine 1920) Weldin 1927 (Approved Lists 1980)

Synonyms (1)

"Bacterium sonnei"

BacDive ID	Other strains from **Shigella sonnei** (26)	Type strain
5172	S. sonnei I virulent, CCUG 68726, NCTC 12984, CECT ... (type strain)
5173	S. sonnei DSM 25715, NCCP 11768
134552	S. sonnei 46, CIP 106203
134775	S. sonnei CIP 63.10
135403	S. sonnei Cabrera, CIP 51.1
135521	S. sonnei CIP 55.56
135531	S. sonnei CNRSS 99 9844, CIP 106345
135645	S. sonnei Descamps, CIP 66.4
136002	S. sonnei St9, CIP 51.44
136283	S. sonnei 1120-66, CIP 104223, ATCC 25931, CCUG 32351, ...
136427	S. sonnei CNRSS 99 9842, CIP 106346
136441	S. sonnei CNRSS 99 9901, CIP 106347
136526	S. sonnei 545/78, CIP 106470
136595	S. sonnei CIP 67.63
139310	S. sonnei 47, M200, CIP 106204
139677	S. sonnei CIP 52.55
141994	S. sonnei CCUG 9567, NCTC 9774
143437	S. sonnei CCUG 19136
144650	S. sonnei CCUG 26076
144877	S. sonnei CCUG 26943
147883	S. sonnei CCUG 34429
148599	S. sonnei CCUG 35690
149522	S. sonnei CCUG 37894
150759	S. sonnei CCUG 42208
152208	S. sonnei CCUG 46081
156599	S. sonnei CCUG 63282

Morphology

Culture and growth conditions

Physiology and metabolism

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68374	29016 ChEBI	arginine	-	hydrolysis	from API ID32E
68374	17057 ChEBI	cellobiose	-	builds acid from	from API ID32E
68374	18333 ChEBI	D-arabitol	-	builds acid from	from API ID32E
68374	18024 ChEBI	D-galacturonic acid	-	builds acid from	from API ID32E
68374	17634 ChEBI	D-glucose	+	builds acid from	from API ID32E
68374	16899 ChEBI	D-mannitol	+	builds acid from	from API ID32E
68374	30849 ChEBI	L-arabinose	-	builds acid from	from API ID32E
68374	18403 ChEBI	L-arabitol	-	builds acid from	from API ID32E
68374	62345 ChEBI	L-rhamnose	-	builds acid from	from API ID32E
68374	25094 ChEBI	lysine	-	degradation	from API ID32E
68374	15792 ChEBI	malonate	-	assimilation	from API ID32E
68374	17306 ChEBI	maltose	-	builds acid from	from API ID32E
68374	17268 ChEBI	myo-inositol	-	builds acid from	from API ID32E
68374	18257 ChEBI	ornithine	-	degradation	from API ID32E
68374	18394 ChEBI	palatinose	-	builds acid from	from API ID32E
68374		Potassium 5-ketogluconate	-	builds acid from	from API ID32E
68374	15963 ChEBI	ribitol	-	builds acid from	from API ID32E
68374	30911 ChEBI	sorbitol	-	builds acid from	from API ID32E
68374	17992 ChEBI	sucrose	-	builds acid from	from API ID32E
68374	27082 ChEBI	trehalose	-	builds acid from	from API ID32E
68374	27897 ChEBI	tryptophan	-	energy source	from API ID32E
68374	16199 ChEBI	urea	-	hydrolysis	from API ID32E

Metabolite production

@ref	Chebi-ID	Metabolite	Production
68374	35581 ChEBI	indole		from API ID32E

Metabolite tests

@ref	Chebi-ID	Metabolite	Indole test
68374	35581 ChEBI	indole	-	from API ID32E

Enzymes

@ref	Value	Activity	Ec
68374	alpha-galactosidase	+	3.2.1.22	from API ID32E
68374	alpha-glucosidase	-	3.2.1.20	from API ID32E
68374	alpha-maltosidase	-		from API ID32E
68374	arginine dihydrolase	-	3.5.3.6	from API ID32E
68374	beta-galactosidase	-	3.2.1.23	from API ID32E
68374	beta-glucosidase	-	3.2.1.21	from API ID32E
68374	beta-glucuronidase	-	3.2.1.31	from API ID32E
68374	L-aspartate arylamidase	-	3.4.11.21	from API ID32E
68374	lipase	-		from API ID32E
68374	lysine decarboxylase	-	4.1.1.18	from API ID32E
68374	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API ID32E
68374	ornithine decarboxylase	-	4.1.1.17	from API ID32E
68374	urease	-	3.5.1.5	from API ID32E

API ID32E

@ref	ODC	ADH (Arg)	LDC (Lys)	URE	LARL	GAT	5KG	LipaseLIP	Phenol red (Acidification)RP	beta GLU	MAN	MAL	ADO	PLE	beta GUR	MNT	IND	N-Acetyl-beta-Glucosaminidasebeta NAG	beta GAL	GLU	SAC	LARA	DARL	alpha GLU	alpha GAL	TRE	RHA	INO	CEL	SOR	alpha-MaltosidasealphaMAL	L-aspartic acid arylamidaseAspA
48548	-	-	-	-	-	-	-	-	+	-	+	-	-	-	-	-	-	-	-	+	-	-	-	-	+	-	-	-	-	-	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host	#Human	#Male
#Host Body Product	#Gastrointestinal tract	#Feces (Stool)
#Infection	#Patient	-

Isolation

@ref	Sample type	Sampling date	Geographic location	Country	Country ISO 3 Code	Continent
48548	Human feces,27-yr-old man	1990-05-05	Göteborg	Sweden	SWE	Europe

Interaction and safety

Sequence information

Genome-based predictions

Literature

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#48548	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 26684
#68374	Automatically annotated from API ID32E .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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