Cite this strain

Neisseria subflava (CCUG 25198)

Name: Neisseria subflava (CCUG 25198)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 144479

Type strain

Culture col. no. CCUG 25198

NCBI tax ID(s) 28449

Special Collections CCUG

Links

Neisseria subflava CCUG 25198 is a bacterium that was isolated from Human oral mucosa,pathological changes of mucosa.

genome sequence Bacteria

Name and taxonomic classification

SI-ID 55899

CCUG 25198

@ref 20215

Last LPSN update 2026-05-29 08:40:42

Domain Bacteria

Phylum Pseudomonadota

Class Betaproteobacteria

Order Neisseriales

Family Neisseriaceae

Genus Neisseria

Species Neisseria subflava

Full scientific name Neisseria subflava (Flügge 1886) Trevisan 1889 (Approved Lists 1980)

Synonyms (1)

"Micrococcus subflavus"

BacDive ID	Other strains from **Neisseria subflava** (16)	Type strain
10478	N. subflava 37, DSM 17610, ATCC 49275, CCUG 23930, CIP ... (type strain)
134992	N. subflava CIP 52.182
135682	N. subflava N 15, CIP 73.12, ATCC 19243, CCUG 26468, ...
135683	N. subflava CIP 73.13, ATCC 14221
137415	N. subflava CIP 68.4
137508	N. subflava 637H, CIP 67.22
138705	N. subflava CIP 52.184
141309	N. subflava CCUG 800
141687	N. subflava CCUG 4788
144386	N. subflava CCUG 24842
144393	N. subflava CCUG 24849
144394	N. subflava CCUG 24850
144438	N. subflava CCUG 24960, ATCC 49277
146032	N. subflava CCUG 30214
146209	N. subflava CCUG 30607
146827	N. subflava CCUG 32186

Morphology

Cell morphology

@ref	Motility	Confidence
125439		93.959

Culture and growth conditions

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125439	obligate aerobe	95.554

Spore formation

@ref	Spore formation	Confidence
125439		99.556

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68377	15824 ChEBI	D-fructose	+	builds acid from	from API NH
68377	17634 ChEBI	D-glucose	+	builds acid from	from API NH
68377	17306 ChEBI	maltose	+	builds acid from	from API NH
68377	18257 ChEBI	ornithine	-	degradation	from API NH
68377	17992 ChEBI	sucrose	-	builds acid from	from API NH
68377	27897 ChEBI	tryptophan	-	energy source	from API NH
68377	16199 ChEBI	urea	-	hydrolysis	from API NH

Metabolite production

@ref	Chebi-ID	Metabolite	Production
68377	35581 ChEBI	indole		from API NH

Metabolite tests

@ref	Chebi-ID	Metabolite	Indole test
68377	35581 ChEBI	indole	-	from API NH

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68377	alkaline phosphatase	-	3.1.3.1	from API NH
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	-	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
68382	beta-galactosidase	-	3.2.1.23	from API zym
68377	beta-galactosidase	-	3.2.1.23	from API NH
68382	beta-glucosidase	-	3.2.1.21	from API zym
68382	beta-glucuronidase	-	3.2.1.31	from API zym
68377	beta-lactamase	-	3.5.2.6	from API NH
68382	cystine arylamidase	-	3.4.11.3	from API zym
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	+		from API zym
68377	gamma-glutamyltransferase	-	2.3.2.2	from API NH
68382	leucine arylamidase	+	3.4.11.1	from API zym
68377	lipase	-		from API NH
68382	lipase (C 14)	-		from API zym
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	-		from API zym
68377	ornithine decarboxylase	-	4.1.1.17	from API NH
68377	proline-arylamidase	+	3.4.11.5	from API NH
68382	trypsin	-	3.4.21.4	from API zym
68377	tryptophan deaminase	-	4.1.99.1	from API NH
68377	urease	-	3.5.1.5	from API NH
68382	valine arylamidase	-		from API zym

Fatty acid profile

Metadata FA analysis

@ref

48155

Fatty acid	Percentage	ECL
C16:0	34.7	16
C16:1 ω7c	32.4	15.819
C18:1 ω7c /12t/9t	11.5	17.824
C12:0	6.9	12
C14:0	5.8	14
C12:0 3OH	3.8	13.455
C14:0 3OH/C16:1 ISO I	2.6	15.485
C18:2 ω6,9c/C18:0 ANTE	0.8	17.724
Unidentified	0.8	16.298
C16:1 ω9c	0.7	15.774

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
48155	-	+	+	+	-	+	-	-	-	-	+	-	-	-	-	-	-	-	-	-

API NH

@ref	PEN	GLU	FRU	MAL	SAC	ODC	URE	LIP	PAL	beta GAL	ProA	GGT	IND
48155	-	+	+	+	-	-	-	-	-	-	+	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host	#Human	-
#Host Body Product	#Oral cavity and Airways	#Mucus
#Host Body-Site	#Oral cavity and airways	-
#Infection	#Patient	-

Isolation

@ref	Sample type	Host species	Sampling date	Geographic location	Country	Country ISO 3 Code	Continent
48155	Human oral mucosa,pathological changes of mucosa	Homo sapiens	1989-09-01	Göteborg	Sweden	SWE	Europe

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	NCBI tax ID	Score
124043	CCUG 25198 assembly for Neisseria subflava CCUG 25198	contig	GCA_963396245	28449.336	28449	34.95

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: CCUG 25198 assembly for Neisseria subflava CCUG 25198
NCBI: GCA_963396245

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	95.55	no
125439	motility	BacteriaNetⓘ	no	93.96	no
125439	gram_stain	BacteriaNetⓘ	positive	61.42	no
125439	spore_formation	BacteriaNetⓘ	no	99.56	no

Literature

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#48155	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 25198
#68377	Automatically annotated from API NH .
#68382	Automatically annotated from API zym .
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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