Name: Lacicoccus kekensis K164
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 14439

Type strain:

Species: Lacicoccus kekensis

Strain Designation: K164

Culture col. no.: DSM 23173, CGMCC 1.10337

Strain history: <- M. Gao, Center Life Sci. Res., China Agricultural Univ., Beijing, China; K164

NCBI tax ID(s): 714307 (species)

Section

Lacicoccus kekensis K164 is a mesophilic bacterium that was isolated from salt lake sediment.

mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Caryophanales*
	Family	*Staphylococcaceae*
	Genus	"Lacicoccus"
	Species	"Lacicoccus kekensis"
	Full Scientific Name (LPSN)	Lacicoccus kekensis (Gao et al. 2010) Bello et al. 2023

Synonym

"Salinicoccus kekensis"

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	positive Confidence in %100

[Ref.: #69480]	Motility	no Confidence in %90.566

Information on culture and growth conditions Culture and growth conditions

[Ref.: #16548]

Culture medium

BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)

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Culture medium growth

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Culture medium link

Medium recipe at MediaDive

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Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #16548]			growth	28 °C

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Temperature range

mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69480]

Ability of spore formation

no Confidence in %99.847

[Ref.: #16548]	Murein short key	A11.02
[Ref.: #16548]	Murein types	A3alpha L-Lys-Gly_5-6

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #16548]	Sample type/isolated from	salt lake sediment
[Ref.: #16548]	Geographic location (country and/or sea, region)	Qinghai Province, Keke Salt Lake
[Ref.: #16548]	Country	China
[Ref.: #16548]	Country ISO 3 Code	CHN
[Ref.: #16548]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	#Lake (large)
#Environmental	#Aquatic	#Sediment
#Condition	#Saline	-

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence GU363531 (>99% sequence identity) for Salinicoccus from Microbeatlas

Aquatic Samples	24
Soil Samples	27
Animal Samples	247
Plant Samples
Total Samples	298

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #16548]	Salinicoccus kekensis strain K164 16S ribosomal RNA gene, partial sequence	GU363531	1516	ENA	714307 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Salinicoccus kekensis DSM 23173	GCA_900220995	scaffold	GenBank	714307 tax ID	*
[Ref.: #66792]	Salinicoccus kekensis strain DSM 23173	714307.3	wgs	PATRIC	714307 tax ID	*
[Ref.: #66792]	Salinicoccus kekensis DSM 23173	2740891890	draft	JGI IMG/M	714307 tax ID	*

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GC-content

50.16 mol%

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Salinicoccus kekensis DSM 23173 NCBI: GCA_900220995.1
[Ref.: #69481]	spore-forming	no	89	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Salinicoccus kekensis DSM 23173 NCBI: GCA_900220995.1
[Ref.: #69480]	flagellated	no	94.875	no
[Ref.: #69480]	gram-positive	yes	90.915	no
[Ref.: #69480]	anaerobic	no	99.402	no
[Ref.: #69480]	aerobic	yes	96.512	no
[Ref.: #69480]	halophile	yes	96.045	no
[Ref.: #69480]	spore-forming	no	88.422	no
[Ref.: #69480]	thermophile	no	99.637	yes
[Ref.: #69480]	glucose-util	yes	81.392	no
[Ref.: #69480]	motile	no	91.074	no
[Ref.: #69480]	glucose-ferment	no	60.186	no

Availability in culture collections External links

[Ref.: #16548]

Culture collection no.

DSM 23173, CGMCC 1.10337

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Salinicoccus kekensis sp. nov., a novel alkaliphile and moderate halophile isolated from Keke Salt Lake in Qinghai, China.	Gao M, Wang L, Chen SF, Zhou YG, Liu HC	Antonie Van Leeuwenhoek	10.1007/s10482-010-9449-x	2010	*

References

#16548

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 23173

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

* These data were automatically processed and therefore are not curated

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Salinicoccus kekensis DSM 23173

Salinicoccus kekensis DSM 23173

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