Name: Clavibacter nebraskensis CCUG 23907
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 144248

Type strain:

Species: Clavibacter nebraskensis

Culture col. no.: CCUG 23907, LMG 7173, CIP 104847

NCBI tax ID(s): 31963 (subspecies)

SI-ID 1828

LMG 7173, CCUG 23907, CIP 104847

Other strains from Clavibacter nebraskensis

C. nebraskensis II 296, DSM 7483, ATCC 27794, CIP ... (type strain)
C. nebraskensis Fur-1, DSM 20400, ATCC 27822, CCM ...
C. nebraskensis phil, DSM 20401

Clavibacter nebraskensis CCUG 23907 is a bacterium that was isolated from Infected leaves,Zea mays var. praecox.

Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Micrococcales*
	Family	*Microbacteriaceae*
	Genus	*Clavibacter*
	Species	**Clavibacter nebraskensis**
	Full Scientific Name (LPSN)	Clavibacter nebraskensis (Vidaver and Mandel 1974) Li et al. 2018

	Synonym	Clavibacter michiganense subsp. nebraskense
	Synonym	Clavibacter michiganensis subsp. nebraskensis
	Synonym	Corynebacterium michiganense subsp. nebraskense
	Synonym	Clavibacter nebraskensis
	Synonym	Corynebacterium nebraskense
	Synonym	Clavibacter michiganensis subsp. nebraskense

Information on physiology and metabolism Physiology and metabolism

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #68379]	D-mannitol ChEBI	-	fermentation	* from API Coryne
[Ref.: #68379]	D-ribose ChEBI	-	fermentation	* from API Coryne
[Ref.: #68379]	D-xylose ChEBI	-	fermentation	* from API Coryne
[Ref.: #68379]	esculin ChEBI	+	hydrolysis	* from API Coryne
[Ref.: #68379]	gelatin ChEBI	-	hydrolysis	* from API Coryne
[Ref.: #68379]	glycogen ChEBI	-	fermentation	* from API Coryne
[Ref.: #68379]	lactose ChEBI	-	fermentation	* from API Coryne
[Ref.: #68379]	maltose ChEBI	-	fermentation	* from API Coryne
[Ref.: #68379]	nitrate ChEBI	-	reduction	* from API Coryne
[Ref.: #68379]	sucrose ChEBI	-	fermentation	* from API Coryne
[Ref.: #68379]	urea ChEBI	-	hydrolysis	* from API Coryne
	Only first 10 entries are displayed. Click here to see all.

	Enzyme	Enzyme activity	EC number
[Ref.: #68379]	alkaline phosphatase	+	3.1.3.1	* from API Coryne
[Ref.: #68379]	alpha-glucosidase	+	3.2.1.20	* from API Coryne
[Ref.: #68379]	beta-galactosidase	+	3.2.1.23	* from API Coryne
[Ref.: #68379]	beta-glucosidase	+	3.2.1.21	* from API Coryne
[Ref.: #68379]	beta-glucuronidase	-	3.2.1.31	* from API Coryne
[Ref.: #68379]	catalase	+	1.11.1.6	* from API Coryne
[Ref.: #68379]	gelatinase	-		* from API Coryne
[Ref.: #68379]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API Coryne
[Ref.: #68379]	pyrazinamidase	-	3.5.1.B15	* from API Coryne
[Ref.: #68379]	pyrrolidonyl arylamidase	+	3.4.19.3	* from API Coryne
[Ref.: #68379]	urease	-	3.5.1.5	* from API Coryne
	Only first 10 entries are displayed. Click here to see all.

API® Coryne:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Reduction of nitrateNIT	PyrazinamidasePYZ	Pyrrolidonyl arylamidasePYRA	Alkaline phosphatasePAL	beta-Glucuronidasebeta GUR	beta-Galactosidasebeta GAL	alpha-Glucosidasealpha GLU	N-Acetyl-beta-Glucosidasebeta NAG	Esculin hydrolysis/beta-GlucosidaseESC	Urease/urea hydrolysisURE	Gelatinase/gelatin hydrolysisGEL	Control fermentationControl	Fermentation of D-glucoseGLU	Fermentation of D-riboseRIB	Fermentation of D-xyloseXYL	Fermentation of D-mannitolMAN	Fermentation of maltoseMAL	Fermentation of lactoseLAC	Fermentation of sucroseSAC	Fermentation of glycogenGLYG	CatalaseCAT
[Ref.: #47884]	925	-	-	+	+	-	+	+	-	+	-	-	-	not determinedn.d.	-	-	-	-	-	-	-	+

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #47884]	Sample type/isolated from	Infected leaves,Zea mays var. praecox
[Ref.: #47884]	Geographic location (country and/or sea, region)	Nebraska
[Ref.: #47884]	Country	USA
[Ref.: #47884]	Country ISO 3 Code	USA
[Ref.: #47884]	Continent	North America
* marker position based on {}

Isolation sources categories

#Host	#Plants	#Herbaceous plants (Grass,Crops)
#Host	#Plants	#Immunocompromised
#Host Body-Site	#Plant	#Leaf (Phyllosphere)

What are isolation sources categories?

Availability in culture collections External links

[Ref.: #47884]

Culture collection no.

CCUG 23907, LMG 7173, CIP 104847

[Ref.: #99474]

SI-ID 1828

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#47884 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 23907

#68379

Automatically annotated from API Coryne .

#99474

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID1828.1 )

* These data were automatically processed and therefore are not curated

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