Campylobacter mucosalis CCUG 21559 is a prokaryote that was isolated from Porcine,necrotic colitis.
genome sequence| @ref 20215 |
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| Domain Bacteria |
| Phylum Pseudomonadota |
| Class Epsilonproteobacteria |
| Order Campylobacterales |
| Family Campylobacteraceae |
| Genus Campylobacter |
| Species Campylobacter mucosalis |
| Full scientific name Campylobacter mucosalis (Lawson et al. 1981 ex Lawson and Rowland 1974) Roop et al. 1985 |
| Synonyms (1) |
| @ref | Oxygen tolerance | Confidence | |
|---|---|---|---|
| 125439 | obligate anaerobe | 92.2 |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 68373 | 30089 ChEBI | acetate | + | assimilation | from API CAM |
| 68373 | 16947 ChEBI | citrate | - | assimilation | from API CAM |
| 68373 | 17634 ChEBI | D-glucose | - | assimilation | from API CAM |
| 68373 | 606565 ChEBI | hippurate | - | hydrolysis | from API CAM |
| 68373 | 25115 ChEBI | malate | + | assimilation | from API CAM |
| 68373 | 17632 ChEBI | nitrate | - | reduction | from API CAM |
| 68373 | 17272 ChEBI | propionate | - | assimilation | from API CAM |
| 68373 | 30031 ChEBI | succinate | + | assimilation | from API CAM |
| 68373 | 78019 ChEBI | triphenyltetrazolium chloride | - | reduction | from API CAM |
| 68373 | 16199 ChEBI | urea | - | hydrolysis | from API CAM |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68373 | alkaline phosphatase | + | 3.1.3.1 | from API CAM |
| 68373 | catalase | + | 1.11.1.6 | from API CAM |
| 68373 | esterase | - | from API CAM | |
| 68373 | gamma-glutamyltransferase | - | 2.3.2.2 | from API CAM |
| 68373 | L-arginine arylamidase | - | from API CAM | |
| 68373 | L-aspartate arylamidase | + | 3.4.11.21 | from API CAM |
| 68373 | pyrrolidonyl arylamidase | - | 3.4.19.3 | from API CAM |
| 68373 | urease | - | 3.5.1.5 | from API CAM |
| Metadata FA analysis | |||||||||||||||||||||||||||||||||||||
| type of FA analysis | whole cell analysis | ||||||||||||||||||||||||||||||||||||
| method/protocol | CCUG | ||||||||||||||||||||||||||||||||||||
| @ref | 47428 | ||||||||||||||||||||||||||||||||||||
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| @ref | URE | Reduction of nitrateNIT | EsteraseEST | HIP | GGT | TTC | PYRA | L-arginine arylamidaseArgA | L-aspartic acid arylamidaseAspA | PAL | H2S productionH2S | GLU | SUT | NAL | CFZ | ACE | PROP | MLT | CIT | Erythromycin resistance (+) sensitivity (-)ERO | CAT | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 47428 | - | - | - | - | - | - | - | - | + | + | + | - | + | - | - | + | - | + | - | - | + |
| @ref | Sample type | Sampling date | Country | Country ISO 3 Code | Continent | |
|---|---|---|---|---|---|---|
| 47428 | Porcine,necrotic colitis | 1973 | United Kingdom | GBR | Europe |
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|
| 66792 | ASM480377v1 assembly for Campylobacter mucosalis CCUG 21559 | complete | 1032067 | 98.02 |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | oxygen_tolerance | BacteriaNetⓘ | obligate anaerobe | 92.20 | no |
| 125439 | gram_stain | BacteriaNetⓘ | negative | 94.70 | no |
| 125439 | motility | BacteriaNetⓘ | no | 59.90 | no |
| 125439 | spore_formation | BacteriaNetⓘ | no | 99.70 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | no | 95.79 | no |
| 125438 | anaerobic | anaerobicⓘ | no | 59.96 | no |
| 125438 | aerobic | aerobicⓘ | no | 88.73 | no |
| 125438 | spore-forming | spore-formingⓘ | no | 92.10 | no |
| 125438 | thermophilic | thermophileⓘ | no | 88.81 | no |
| 125438 | flagellated | motile2+ⓘ | yes | 60.21 | no |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Genetics | Metagenome-Assembled Genomes and Metatranscriptome Analysis of Perfluorooctane Sulfonate-Reducing Bacteria Enriched From Activated Sludge. | Sorn S, Matsuura N, Honda R. | Environ Microbiol | 10.1111/1462-2920.70087 | 2025 | |
| In vitro Characterization of Biofilm Formation in Prevotella Species. | Albaghdadi SZ, Altaher JB, Drobiova H, Bhardwaj RG, Karched M. | Front Oral Health | 10.3389/froh.2021.724194 | 2021 | ||
| Genetics | Species classification and novel plasmid identifications in Arcobacter cryaerophilus and Arcobacter cryaerophilus-like organisms. | Zhou G, Wang M, Wang H, Chen X, Gu Y, Shao Z, Zhang J, Zhang M. | Front Microbiol | 10.3389/fmicb.2022.984450 | 2022 | |
| Complete Genome Sequence of Mycobacterium chelonae Type Strain CCUG 47445, a Rapidly Growing Species of Nontuberculous Mycobacteria. | Jaen-Luchoro D, Salva-Serra F, Aliaga-Lozano F, Segui C, Busquets A, Ramirez A, Ruiz M, Gomila M, Lalucat J, Bennasar-Figueras A. | Genome Announc | 10.1128/genomea.00550-16 | 2016 | ||
| Complete Genome Sequence of Actinobaculum schaalii Strain CCUG 27420. | Kristiansen R, Dueholm MS, Bank S, Nielsen PH, Karst SM, Cattoir V, Lienhard R, Grisold AJ, Olsen AB, Reinhard M, Soby KM, Christensen JJ, Prag J, Thomsen TR. | Genome Announc | 10.1128/genomea.00880-14 | 2014 | ||
| Enzymology | New tricks from an old cow: infective endocarditis caused by Streptococcus dysgalactiae subsp. dysgalactiae. | Jordal S, Glambek M, Oppegaard O, Kittang BR. | J Clin Microbiol | 10.1128/jcm.02437-14 | 2015 | |
| Comparison of Streptococcus halichoeri isolates from canine and fur animal infections: biochemical patterns, molecular characteristics and genetic relatedness. | Eklund M, Aaltonen K, Sironen T, Raunio-Saarnisto M, Gronthal T, Nordgren H, Pitkala A, Vapalahti O, Rantala M. | Acta Vet Scand | 10.1186/s13028-020-00525-3 | 2020 | ||
| Enzymology | Biological roles of the O-methyl phosphoramidate capsule modification in Campylobacter jejuni. | van Alphen LB, Wenzel CQ, Richards MR, Fodor C, Ashmus RA, Stahl M, Karlyshev AV, Wren BW, Stintzi A, Miller WG, Lowary TL, Szymanski CM. | PLoS One | 10.1371/journal.pone.0087051 | 2014 | |
| Octahedron Iron Oxide Nanocrystals Prohibited Clostridium difficile Spore Germination and Attenuated Local and Systemic Inflammation. | Lee WT, Wu YN, Chen YH, Wu SR, Shih TM, Li TJ, Yang LX, Yeh CS, Tsai PJ, Shieh DB. | Sci Rep | 10.1038/s41598-017-08387-y | 2017 | ||
| The Immunopathogenic Potential of Arcobacter butzleri - Lessons from a Meta-Analysis of Murine Infection Studies. | Golz G, Alter T, Bereswill S, Heimesaat MM. | PLoS One | 10.1371/journal.pone.0159685 | 2016 | ||
| Arcobacter butzleri Induce Colonic, Extra-Intestinal and Systemic Inflammatory Responses in Gnotobiotic IL-10 Deficient Mice in a Strain-Dependent Manner. | Golz G, Karadas G, Alutis ME, Fischer A, Kuhl AA, Breithaupt A, Gobel UB, Alter T, Bereswill S, Heimesaat MM. | PLoS One | 10.1371/journal.pone.0139402 | 2015 | ||
| Phylogeny | Development of a real-time fluorescence resonance energy transfer PCR to detect arcobacter species. | Abdelbaqi K, Buissonniere A, Prouzet-Mauleon V, Gresser J, Wesley I, Megraud F, Menard A. | J Clin Microbiol | 10.1128/jcm.00256-07 | 2007 | |
| The effect of Helicobacter pylori infection and different H. pylori components on the proliferation and apoptosis of gastric epithelial cells and fibroblasts. | Gonciarz W, Krupa A, Hinc K, Obuchowski M, Moran AP, Gajewski A, Chmiela M. | PLoS One | 10.1371/journal.pone.0220636 | 2019 | ||
| Enzymology | Phylogenetic analysis of faecal microbiota from captive cheetahs reveals underrepresentation of Bacteroidetes and Bifidobacteriaceae. | Becker AA, Hesta M, Hollants J, Janssens GP, Huys G. | BMC Microbiol | 10.1186/1471-2180-14-43 | 2014 | |
| Immune responses to bile-tolerant helicobacter species in patients with chronic liver diseases, a randomized population group, and healthy blood donors. | Ananieva O, Nilsson I, Vorobjova T, Uibo R, Wadstrom T. | Clin Diagn Lab Immunol | 10.1128/cdli.9.6.1160-1164.2002 | 2002 | ||
| Metabolism | Siderophore production by Pseudomonas stutzeri under aerobic and anaerobic conditions. | Essen SA, Johnsson A, Bylund D, Pedersen K, Lundstrom US. | Appl Environ Microbiol | 10.1128/aem.00072-07 | 2007 | |
| Enzymology | Differences in surface-exposed antigen expression between Helicobacter pylori strains isolated from duodenal ulcer patients and from asymptomatic subjects. | Thoreson AC, Hamlet A, Celik J, Bystrom M, Nystrom S, Olbe L, Svennerholm AM. | J Clin Microbiol | 10.1128/jcm.38.9.3436-3441.2000 | 2000 | |
| Phylogeny | Use of phylogenetic and phenotypic analyses to identify nonhemolytic streptococci isolated from bacteremic patients. | Hoshino T, Fujiwara T, Kilian M. | J Clin Microbiol | 10.1128/jcm.43.12.6073-6085.2005 | 2005 | |
| Ornithinibacillus xuwenensis sp. nov., A Novel Thermotolerant Bacterium Isolated from Mangrove Sediment. | Li M, Hu X, Ni Y, Ni T, Li F, Xue D. | Curr Microbiol | 10.1007/s00284-025-04120-5 | 2025 | ||
| Phylogeny | Gemella parahaemolysans sp. nov. and Gemella taiwanensis sp. nov., isolated from human clinical specimens. | Hung WC, Chen HJ, Tsai JC, Tseng SP, Lee TF, Hsueh PR, Shieh WY, Teng LJ. | Int J Syst Evol Microbiol | 10.1099/ijs.0.052795-0 | 2014 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #47428 | Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 21559 |
| #66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . |
| #68373 | Automatically annotated from API CAM . |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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