Vibrio fluvialis CCUG 20267 is a mesophilic prokaryote that was isolated from River water.
mesophilic 16S sequence| @ref 20215 |
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| Domain Bacteria |
| Phylum Pseudomonadota |
| Class Gammaproteobacteria |
| Order "Vibrionales" |
| Family Vibrionaceae |
| Genus Vibrio |
| Species Vibrio fluvialis |
| Full scientific name Vibrio fluvialis Lee et al. 1981 |
| Synonyms (2) |
| @ref | Growth | Type | Temperature (°C) | Range | |
|---|---|---|---|---|---|
| 67770 | positive | growth | 30 | mesophilic |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 68374 | 29016 ChEBI | arginine | - | hydrolysis | from API ID32E |
| 68374 | 17057 ChEBI | cellobiose | - | builds acid from | from API ID32E |
| 68374 | 18333 ChEBI | D-arabitol | + | builds acid from | from API ID32E |
| 68374 | 18024 ChEBI | D-galacturonic acid | + | builds acid from | from API ID32E |
| 68374 | 17634 ChEBI | D-glucose | + | builds acid from | from API ID32E |
| 68374 | 16899 ChEBI | D-mannitol | + | builds acid from | from API ID32E |
| 68374 | 30849 ChEBI | L-arabinose | + | builds acid from | from API ID32E |
| 68374 | 18403 ChEBI | L-arabitol | - | builds acid from | from API ID32E |
| 68374 | 62345 ChEBI | L-rhamnose | - | builds acid from | from API ID32E |
| 68374 | 25094 ChEBI | lysine | - | degradation | from API ID32E |
| 68374 | 15792 ChEBI | malonate | - | assimilation | from API ID32E |
| 68374 | 17306 ChEBI | maltose | + | builds acid from | from API ID32E |
| 68374 | 17268 ChEBI | myo-inositol | - | builds acid from | from API ID32E |
| 68374 | 18257 ChEBI | ornithine | - | degradation | from API ID32E |
| 68374 | 18394 ChEBI | palatinose | - | builds acid from | from API ID32E |
| 68374 | Potassium 5-ketogluconate | - | builds acid from | from API ID32E | |
| 68374 | 15963 ChEBI | ribitol | - | builds acid from | from API ID32E |
| 68374 | 30911 ChEBI | sorbitol | - | builds acid from | from API ID32E |
| 68374 | 17992 ChEBI | sucrose | + | builds acid from | from API ID32E |
| 68374 | 27082 ChEBI | trehalose | + | builds acid from | from API ID32E |
| 68374 | 27897 ChEBI | tryptophan | + | energy source | from API ID32E |
| 68374 | 16199 ChEBI | urea | - | hydrolysis | from API ID32E |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68374 | alpha-galactosidase | - | 3.2.1.22 | from API ID32E |
| 68374 | alpha-glucosidase | - | 3.2.1.20 | from API ID32E |
| 68374 | alpha-maltosidase | - | from API ID32E | |
| 68374 | arginine dihydrolase | - | 3.5.3.6 | from API ID32E |
| 68374 | beta-galactosidase | + | 3.2.1.23 | from API ID32E |
| 68374 | beta-glucosidase | + | 3.2.1.21 | from API ID32E |
| 68374 | beta-glucuronidase | - | 3.2.1.31 | from API ID32E |
| 68374 | L-aspartate arylamidase | - | 3.4.11.21 | from API ID32E |
| 68374 | lipase | - | from API ID32E | |
| 68374 | lysine decarboxylase | - | 4.1.1.18 | from API ID32E |
| 68374 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | from API ID32E |
| 68374 | ornithine decarboxylase | - | 4.1.1.17 | from API ID32E |
| 68374 | urease | - | 3.5.1.5 | from API ID32E |
| @ref | ODC | ADH (Arg) | LDC (Lys) | URE | LARL | GAT | 5KG | LipaseLIP | Phenol red (Acidification)RP | beta GLU | MAN | MAL | ADO | PLE | beta GUR | MNT | IND | N-Acetyl-beta-Glucosaminidasebeta NAG | beta GAL | GLU | SAC | LARA | DARL | alpha GLU | alpha GAL | TRE | RHA | INO | CEL | SOR | alpha-MaltosidasealphaMAL | L-aspartic acid arylamidaseAspA | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 47116 | - | - | - | - | - | + | - | - | - | + | + | + | - | - | - | - | + | - | + | + | + | + | + | - | - | + | - | - | - | - | - | - |
| 47116 | Sample typeRiver water |
Global distribution of 16S sequence LC050179 (>99% sequence identity) for Vibrio from Microbeatlas ![]()
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 67770 | Vibrio furnissii gene for 16S ribosomal RNA, partial cds, strain: JCM 1282 | LC050179 | 1475 | 29494 | ||
| 67770 | V.fluvialis (ATCC 33812) gene for 16S ribosomal RNA (partial) | Z22990 | 199 | 676 | ||
| 124043 | Vibrio fluvialis 16S rRNA. | D11203 | 150 | 676 | ||
| 124043 | Vibrio fluvialis 16S rRNA. | D11252 | 215 | 676 |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Metabolism | Quantitative detection of Vibrio cholera toxin by real-time and dynamic cytotoxicity monitoring. | Jin D, Luo Y, Zheng M, Li H, Zhang J, Stampfl M, Xu X, Ding G, Zhang Y, Tang YW. | J Clin Microbiol | 10.1128/jcm.01959-13 | 2013 | |
| Metabolism | Antimicrobial and cytotoxic assessment of marine cyanobacteria - Synechocystis and Synechococcus. | Martins RF, Ramos MF, Herfindal L, Sousa JA, Skaerven K, Vasconcelos VM. | Mar Drugs | 10.3390/md6010001 | 2008 | |
| Cultivation | A medium for presumptive identification of Vibrio anguillarum. | Alsina M, Martinez-Picado J, Jofre J, Blanch AR. | Appl Environ Microbiol | 10.1128/aem.60.5.1681-1683.1994 | 1994 | |
| Enzymology | Rapid detection and identification of Vibrio anguillarum by using a specific oligonucleotide probe complementary to 16S rRNA. | Martinez-Picado J, Blanch AR, Jofre J. | Appl Environ Microbiol | 10.1128/aem.60.2.732-737.1994 | 1994 | |
| Compilation of 5S rRNA and 5S rRNA gene sequences. | Specht T, Wolters J, Erdmann VA. | Nucleic Acids Res | 10.1093/nar/18.suppl.2215 | 1990 | ||
| Enzymology | Direct detection of Salmonella spp. in estuaries by using a DNA probe. | Knight IT, Shults S, Kaspar CW, Colwell RR. | Appl Environ Microbiol | 10.1128/aem.56.4.1059-1066.1990 | 1990 | |
| Phylogeny | Numerical taxonomy of phenanthrene-degrading bacteria isolated from the Chesapeake Bay. | West PA, Okpokwasili GC, Brayton PR, Grimes DJ, Colwell RR. | Appl Environ Microbiol | 10.1128/aem.48.5.988-993.1984 | 1984 | |
| Genes Responsible for Size Reduction of Marine Vibrios during Starvation Are Located on the Chromosome. | Smigielski AJ, Wallace B, Marshall KC. | Appl Environ Microbiol | 10.1128/aem.56.6.1645-1648.1990 | 1990 | ||
| Life after log. | Siegele DA, Kolter R. | J Bacteriol | 10.1128/jb.174.2.345-348.1992 | 1992 | ||
| Dormancy in Stationary-Phase Cultures of Micrococcus luteus: Flow Cytometric Analysis of Starvation and Resuscitation. | Kaprelyants AS, Kell DB. | Appl Environ Microbiol | 10.1128/aem.59.10.3187-3196.1993 | 1993 | ||
| Metabolism | Starvation-specific formation of a peripheral exopolysaccharide by a marine Pseudomonas sp., strain S9. | Wrangstadh M, Szewzyk U, Ostling J, Kjelleberg S. | Appl Environ Microbiol | 10.1128/aem.56.7.2065-2072.1990 | 1990 | |
| Metabolism | Effects of respiratory activity on starvation survival of marine vibrios. | Smigielski AJ, Wallace BJ, Abrahams S, Marshall KC | Arch Microbiol | 10.1007/BF00247817 | 1990 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #47116 | Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 20267 |
| #67770 | Japan Collection of Microorganism (JCM) ; Curators of the JCM; |
| #68374 | Automatically annotated from API ID32E . |
| #69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta . |
| #124043 | Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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