Treponema pedis T3552B is an anaerobe, mesophilic, Gram-negative animal pathogen that was isolated from bovine digital dermatitis lesions in Holstein-Friesian cows.
Gram-negative motile anaerobe mesophilic animal pathogen genome sequence 16S sequence| @ref 20215 |
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Last LPSN update
2025-12-16 09:50:19 |
| Domain Pseudomonadati |
| Phylum Spirochaetota |
| Class Spirochaetia |
| Order Spirochaetales |
| Family Treponemataceae |
| Genus Treponema |
| Species Treponema pedis |
| Full scientific name Treponema pedis Evans et al. 2009 |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 7659 | OMIZ-PAT (DSMZ Medium 1494) | Medium recipe at MediaDive  | Name: . OMIZ-PAT Medium (modified) (DSMZ Medium 1494) Composition: (NH4)6Mo7O24 x 4 H2O 12.4 g/l Yeast extract 3.0 g/l Fe SO4 x 7 H2O 2.78015 g/l D-Glucose 2.0 g/l D-Mannose 2.0 g/l D-Arabinose 2.0 g/l L-Fucose 2.0 g/l D-Trehalose 2.0 g/l D-Sucrose 2.0 g/l L-Rhamnose 2.0 g/l NH4Cl 1.6 g/l Glutathione 1.5366 g/l Ascorbic acid 1.0 g/l NaHCO3 1.0 g/l Ethanol 1.0 g/l KCl 0.968 g/l D-Maltose 0.8 g/l D-glucuronic acid 0.8 g/l D-Mannitol 0.8 g/l D-galacturonic acid 0.8 g/l D-Fructose 0.8 g/l L-Glutamine 0.68 g/l L-Histidine 0.62 g/l NaVO3 0.61 g/l D 0.56 g/l Pyruvic acid 0.55 g/l L-Serine 0.525 g/l Fumaric acid 0.5 g/l HCl 0.3646 g/l L-Cysteine HCl 0.35 g/l L-Glutamic acid 0.3 g/l Formic acid 0.3 g/l ZnSO4 x 7 H2O 0.287 g/l MgSO4 x 7 H2O 0.25 g/l DL-carnitine 0.2 g/l N-Acetylglucosamine 0.2 g/l Citric acid 0.2 g/l L-Lysine HCl 0.182 g/l L-Arginine 0.175 g/l L-Ornithine HCl 0.17 g/l L-Phenylalanine 0.165 g/l CaCl2 x H2O 0.15 g/l L-Methionine 0.15 g/l L-Asparagine 0.15 g/l NaH2PO4 x H2O 0.14 g/l L-Leucine 0.131 g/l L-Isoleucine 0.131 g/l NiSO4 x 6 H2O 0.131 g/l L-Threonine 0.12 g/l L-Aspartic acid 0.118 g/l SnCl2 x 2 H2O 0.118 g/l L-Valine 0.117 g/l L-Proline 0.115 g/l L-Tryptophan 0.102 g/l Nicotinic acid 0.1 g/l Folinic acid 0.1 g/l L-Tyrosine 0.09 g/l NaOH 0.079994 g/l Glycine 0.075 g/l Nicotinamide 0.05 g/l Folic acid 0.05 g/l D-(+)-biotin 0.05 g/l Vitamine B12 0.05 g/l Choline chloride 0.05 g/l Myo-inositol 0.05 g/l L-Alanine 0.045 g/l Hemin 0.026076 g/l N-acetylmuramic acid 0.025 g/l Na2SeO3 0.0173 g/l MnSO4 x H2O 0.0169 g/l Riboflavine 0.01 g/l 2-Mercaptoethanesulfonic acid 0.01 g/l Phenol red 0.01 g/l Putrescine 2 HCl 0.005 g/l Pyridoxal hydrochloride 0.005 g/l Pyridoxal phosphate 0.005 g/l Calcium D-(+)-pantothenate 0.005 g/l Thiamine HCl 0.005 g/l Thiamin pyrophosphate 0.005 g/l Thymidine 0.0024 g/l N-(2-acetamido)-2-aminoethanesulfonic acid 0.0018 g/l Hypoxanthine 0.0014 g/l Uracil 0.0011 g/l Flavin adenine dinucleotide 0.001 g/l ß-nicotinamide adenine dinucleotide 0.001 g/l Coenzym A 0.001 g/l CuSO4 0.000789 g/l Cholesterol Asialofetuin 2-Mercaptoethanol Isovaleric acid Valeric acid 2-Methylbutyric acid Isobutyric acid DL-alpha-lipoic acid Rabbit serum Distilled water | ||
| 7659 | OTEB-MEDIUM (DSMZ Medium 1245) | Medium recipe at MediaDive | Name: OTEB-MEDIUM (DSMZ Medium 1245; with strain-specific modifications) Composition: Fetal bovine serum 100.0 g/l Proteose peptone no. 2 5.0 g/l Sodium Chloride 5.0 g/l Yeast extract 5.0 g/l Heart Infusion Broth 5.0 g/l Potassium Phosphate 2.0 g/l Fructose 0.8 g/l Sucrose 0.8 g/l Maltose 0.8 g/l Ribose 0.8 g/l Xylose 0.8 g/l Pectin 0.8 g/l Starch 0.8 g/l Sodium pyruvate 0.8 g/l Glucose 0.8 g/l L-Cysteine 0.5 g/l Magnesium sulfate 0.1 g/l Vitamin K1 0.001 g/l Thiamine pyrophosphate 7.5e-05 g/l Acetic acid Propionic acid n-Butyric acid n-Valeric acid Isovaleric acid Isobutyric acid 2-Methylbutyric acid Distilled water |
| @ref | Growth | Type | Temperature (°C) | Range | |
|---|---|---|---|---|---|
| 7659 | positive | growth | 37 | mesophilic |
| @ref | Sample type | Country | Country ISO 3 Code | Continent | |
|---|---|---|---|---|---|
| 7659 | bovine digital dermatitis lesions in Holstein-Friesian cows | United Kingdom | GBR | Europe |
Global distribution of 16S sequence EF061268 (>99% sequence identity) for Treponema pedis subclade from Microbeatlas 
 Aquatic Samples |
36 |
 Soil Samples |
62 |
 Animal Samples |
2554 |
 Plant Samples |
10 |
| Total Samples | 2662 |
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 66792 | ASM1716132v1 assembly for Treponema pedis T3552B | complete | GCA_017161325   | 409322.5  | 8115657776  | 409322 | 93.01 |  |
| 66792 | Treponema pedis DSM 18691 | complete | 2913380516 | 409322 | 80.42 | | ||
| 124043 | ASM5043360v1 assembly for Treponema pedis DSM 18691 | contig | GCA_050433605 | 409322 | 59.06 | |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 7659 | Treponema pedis strain T3552B 16S ribosomal RNA gene, partial sequence | EF061268 | 1417 |  | 409322 |
| Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|
| The Presence of Treponema spp. in Equine Hoof Canker Biopsies and Skin Samples from Bovine Digital Dermatitis Lesions. | Marcekova P, Mad'ar M, Stykova E, Kacirova J, Sondorova M, Mudron P, Zert Z. | Microorganisms | 10.3390/microorganisms9112190 | 2021 | |
| Development of a multiplex quantitative PCR assay for simultaneous detection of Treponema phagedenis, Treponema pedis, Treponema medium, and 'Treponema vincentii' and evaluation on bovine digital dermatitis biopsies. | Frosth S, Eriksson HK, Rosander A. | Vet Res Commun | 10.1007/s11259-023-10147-5 | 2023 | |
| Field Study on the Prevalence of Ovine Footrot, Contagious Ovine Digital Dermatitis, and Their Associated Bacterial Species in Swedish Sheep Flocks. | Rosander A, Mourath S, Konig U, Nyman A, Frosth S. | Pathogens | 10.3390/pathogens12101224 | 2023 | |
| Dissecting the molecular diversity and commonality of bovine and human treponemes identifies key survival and adhesion mechanisms. | Staton GJ, Clegg SR, Ainsworth S, Armstrong S, Carter SD, Radford AD, Darby A, Wastling J, Hall N, Evans NJ. | PLoS Pathog | 10.1371/journal.ppat.1009464 | 2021 | |
| Treponema pedis sp. nov., a spirochaete isolated from bovine digital dermatitis lesions. | Evans NJ, Brown JM, Demirkan I, Murray RD, Birtles RJ, Hart CA, Carter SD | Int J Syst Evol Microbiol | 10.1099/ijs.0.002287-0 | 2009 | |
How to citeIf you want to cite this particular strain cite the following doi:
https://doi.org/10.13145/bacdive14349.20251217.10
When using BacDive for research please cite the following paper
BacDive in 2025: the core database for prokaryotic strain data
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