Name: Moraxella catarrhalis CCUG 18283
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 143294

Type strain:

Species: Moraxella catarrhalis

Culture col. no.: CCUG 18283

NCBI tax ID(s): 480 (species)

SI-ID 55374

CCUG 18283

Other strains from Moraxella catarrhalis

Section

Moraxella catarrhalis CCUG 18283 is a bacterium that was isolated from Human nasopharynx,9-yr-old boy.

Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Pseudomonadales*
	Family	*Moraxellaceae*
	Genus	*Moraxella*
	Species	**Moraxella catarrhalis**
	Full Scientific Name (LPSN)	Moraxella catarrhalis (Frosch and Kolle 1896) Henriksen and Bøvre 1968 (Approved Lists 1980)

	Synonym	Branhamella catarrhalis
	Synonym	"Mikrokokkus* catarrhalis"*

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	negative Confidence in %99.98

[Ref.: #69480]	Motility	no Confidence in %97.035

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69481]	Ability of spore formation	no Confidence in %100
[Ref.: #69480]	Ability of spore formation	no Confidence in %99.999

Fatty acid profile

Metadata FA analysis

Reference

[Ref.: #46796]

Fatty acid	Percentage	ECL
C18:1 ω9c	42.9	17.769
C18:2 ω6,9c/C18:0 ANTE	11.7	17.724
C16:1 ω7c	9.6	15.819
C16:0	8.7	16
C10:0	6.2	10
C12:0 3OH	6.1	13.455
C12:0	4.3	12
C17:1 ω8c	2.5	16.792
C18:0	2.3	18
C18:3 ω6,9,12c	2	17.577
C16:0 N alcohol	1.3	15.549
C16:1 ω9c	1.3	15.774
C14:0	0.8	14
unknown 12.486	0.4	12.486

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #46796]	Sample type/isolated from	Human nasopharynx,9-yr-old boy
[Ref.: #46796]	Sampling date	1978
[Ref.: #46796]	Geographic location (country and/or sea, region)	Lund
[Ref.: #46796]	Country	Sweden
[Ref.: #46796]	Country ISO 3 Code	SWE
[Ref.: #46796]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Host	#Human	#Male
#Host Body-Site	#Oral cavity and airways	#Throat
#Infection	#Patient	-
#Host	#Human	#Child

What are isolation sources categories?

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Moraxella catarrhalis CCUG 18283	GCA_001679105	scaffold	GenBank	480 tax ID	*
[Ref.: #66792]	Moraxella catarrhalis strain CCUG 18283	480.251	wgs	PATRIC	480 tax ID	*
[Ref.: #66792]	Moraxella catarrhalis CCUG 18283	2854830479	draft	JGI IMG/M	480 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Moraxella catarrhalis strain CCUG 18283 PATRIC: 480.251
[Ref.: #69481]	spore-forming	no	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Moraxella catarrhalis CCUG 18283 NCBI: GCA_001679105.1
[Ref.: #69480]	flagellated	no	94.177	no
[Ref.: #69480]	gram-positive	no	97.507	no
[Ref.: #69480]	anaerobic	no	99.296	no
[Ref.: #69480]	aerobic	no	86.242	no
[Ref.: #69480]	halophile	no	75.96	no
[Ref.: #69480]	spore-forming	no	97.448	no
[Ref.: #69480]	glucose-util	no	78.43	no
[Ref.: #69480]	thermophile	no	97.955	no
[Ref.: #69480]	motile	no	92.007	no
[Ref.: #69480]	glucose-ferment	no	92.467	no

Availability in culture collections External links

[Ref.: #46796]

Culture collection no.

CCUG 18283

[Ref.: #98676]

SI-ID 55374

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#46796 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 18283

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#98676

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID55374.1 )

* These data were automatically processed and therefore are not curated

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Moraxella catarrhalis strain CCUG 18283

Moraxella catarrhalis CCUG 18283

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