Name: Spirochaeta aurantia J1
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 14317

Type strain:

Species: Spirochaeta aurantia

Strain Designation: J1

Culture col. no.: DSM 1902, ATCC 25082

Strain history: <- E. Canale-Parola, University of Massachusetts, Department of Microbiology, USA; J1 <- J. A. Breznak and E. Canale-Parola {1968}

NCBI tax ID(s): 147 (species)

SI-ID 38344

ATCC 25082, DSM 1902

Section

Spirochaeta aurantia J1 is a facultative anaerobe, mesophilic bacterium that was isolated from fresh water mud.

facultative anaerobe
mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Spirochaetota*
	Class	*Spirochaetia*
	Order	*Spirochaetales*
	Family	*Spirochaetaceae*
	Genus	*Spirochaeta*
	Species	**Spirochaeta aurantia**
	Full Scientific Name (LPSN)	Spirochaeta aurantia (ex Vinzent 1926) Canale-Parola 1980

Information on culture and growth conditions Culture and growth conditions

[Ref.: #921]

Culture medium

TERETINEMA MEDIUM (DSMZ Medium 169)

[Ref.: #921]

Culture medium growth

[Ref.: #921]

Culture medium link

Medium recipe provided by DSMZ

	Temperatures	Kind of temperature		Temperature
[Ref.: #921]			growth	30 °C

[Ref.: #921]

Temperature range

mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #921]

Oxygen tolerance

facultative anaerobe

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #921]	Sample type/isolated from	fresh water mud
[Ref.: #921]	Geographic location (country and/or sea, region)	Massachusetts, Amherst
[Ref.: #921]	Country	USA
[Ref.: #921]	Country ISO 3 Code	USA
[Ref.: #921]	Continent	North America
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	#Freshwater
#Environmental	#Terrestrial	#Mud (Sludge)

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence NR_104782 (>99% sequence identity) for Spirochaeta aurantia subclade from Microbeatlas

Aquatic Samples	2374
Soil Samples	1220
Animal Samples	528
Plant Samples	460
Total Samples	4582

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #921]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #921]	Spirochaeta aurantia subsp. aurantia strain J1 16S ribosomal RNA, partial sequence	NR_104782	1528	GenBank	143778 tax ID
[Ref.: #20218]	Spirochaeta aurantia 16S rRNA	M57740	1561	ENA	143778 tax ID	*
[Ref.: #20218]	Spirochaeta aurantia subsp. aurantia partial 16S rRNA gene, type strain DSM 1902T	FR749896	1528	ENA	143778 tax ID	*

Availability in culture collections External links

[Ref.: #921]

Culture collection no.

DSM 1902, ATCC 25082

[Ref.: #83467]

SI-ID 38344

References

#921	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 1902

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#83467

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID38344.1 )

* These data were automatically processed and therefore are not curated

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