Name: Sphingopyxis alaskensis DSM 13593
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 14273

Type strain:

Species: Sphingopyxis alaskensis

Culture col. no.: DSM 13593, LMG 18877, CCUG 45028, CIP 106977, RB 2256

Strain history: CIP <- 2001, LMG <- J.C. Gottschal, Univ. Groningen, The Netherlands: strain RB 2256

NCBI tax ID(s): 117207 (species)

SI-ID 12488

LMG 18877, DSM 13593, CCUG 45028, CIP 106977, KCTC 12916, KCTC 12165

Other strains from Sphingopyxis alaskensis

S. alaskensis ST022281(HKI), F104, P479, DoHKI85, ...
S. alaskensis CIP 103050

Section

Sphingopyxis alaskensis DSM 13593 is an aerobe, mesophilic, Gram-negative bacterium that was isolated from seawater.

Gram-negative
aerobe
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Alphaproteobacteria*
	Order	*Sphingomonadales*
	Family	*Sphingomonadaceae*
	Genus	*Sphingopyxis*
	Species	**Sphingopyxis alaskensis**
	Full Scientific Name (LPSN)	Sphingopyxis alaskensis (Vancanneyt et al. 2001) Godoy et al. 2003

Synonym

Sphingomonas alaskensis

Information on morphological and physiological properties Morphology

[Ref.: #116175]	Gram stain	negative
[Ref.: #69480]	Gram stain	negative Confidence in %99.982

[Ref.: #116175]	Cell shape	rod-shaped

[Ref.: #116175]	Motility	yes

[Ref.: #116175]	Pigment production	no
[Ref.: #116175]	Pigment name	Pyocyanin

Information on culture and growth conditions Culture and growth conditions

[Ref.: #5101]

Culture medium

TRYPTONE SOYA BROTH (TSB) (DSMZ Medium 545)

[Ref.: #5101]

Culture medium growth

[Ref.: #5101]

Culture medium link

Medium recipe at MediaDive

[Ref.: #5101]

Culture medium composition

expand / minimize

[Ref.: #37377]

Culture medium

MEDIUM 72- for trypto casein soja agar

[Ref.: #37377]

Culture medium growth

[Ref.: #37377]

Culture medium composition

expand / minimize

[Ref.: #116175]

Culture medium

CIP Medium 72

[Ref.: #116175]

Culture medium growth

[Ref.: #116175]

Culture medium link

Medium recipe provided by DSMZ

	Kind of temperature		Temperature
[Ref.: #5101]		growth	28 °C
[Ref.: #37377]		growth	30 °C
[Ref.: #56601]		growth	30-37 °C
[Ref.: #116175]		growth	25-41 °C
[Ref.: #116175]	no	growth	5 °C
[Ref.: #116175]	no	growth	10 °C

[Ref.: #5101]	Temperature range	mesophilic
[Ref.: #37377]	Temperature range	mesophilic
[Ref.: #56601]	Temperature range	mesophilic
[Ref.: #116175]	Temperature range	psychrophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #56601]	Oxygen tolerance	aerobe
[Ref.: #116175]	Oxygen tolerance	obligate aerobe

[Ref.: #69481]	Ability of spore formation	no Confidence in %99
[Ref.: #69480]	Ability of spore formation	no Confidence in %99.992

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #116175]		NaCl		growth	0-10	%

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #68369]	adipate ChEBI	-	assimilation	* from API 20NE
[Ref.: #68369]	arginine ChEBI	-	hydrolysis	* from API 20NE
[Ref.: #116175]	citrate ChEBI	-	carbon source
[Ref.: #68369]	D-glucose ChEBI	+	assimilation	* from API 20NE
[Ref.: #68369]	D-glucose ChEBI	-	fermentation	* from API 20NE
[Ref.: #68369]	D-mannitol ChEBI	-	assimilation	* from API 20NE
[Ref.: #68369]	D-mannose ChEBI	-	assimilation	* from API 20NE
[Ref.: #68369]	decanoate ChEBI	-	assimilation	* from API 20NE
[Ref.: #116175]	esculin ChEBI	+	hydrolysis
[Ref.: #68369]	esculin ChEBI	+	hydrolysis	* from API 20NE
[Ref.: #68369]	gelatin ChEBI	-	hydrolysis	* from API 20NE
[Ref.: #68369]	gluconate ChEBI	-	assimilation	* from API 20NE
[Ref.: #68369]	L-arabinose ChEBI	-	assimilation	* from API 20NE
[Ref.: #68369]	malate ChEBI	+	assimilation	* from API 20NE
[Ref.: #68369]	maltose ChEBI	+	assimilation	* from API 20NE
[Ref.: #68369]	N-acetylglucosamine ChEBI	-	assimilation	* from API 20NE
[Ref.: #116175]	nitrate ChEBI	-	reduction
[Ref.: #116175]	nitrate ChEBI	-	respiration
[Ref.: #68369]	nitrate ChEBI	-	reduction	* from API 20NE
[Ref.: #116175]	nitrite ChEBI	-	reduction
[Ref.: #68369]	tryptophan ChEBI	-	energy source	* from API 20NE
[Ref.: #68369]	urea ChEBI	-	hydrolysis	* from API 20NE
	Only first 10 entries are displayed. Click here to see all.

	Antibiotica	Metabolite	Antibiotic sensitivity	Antibiotic resistance
[Ref.: #116175]		0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)	no	yes

	Metabolite production	Metabolite	Production
[Ref.: #116175]		indole ChEBI	no
[Ref.: #68369]		indole ChEBI	no	* from API 20NE

	Physiological tests	Metabolite	Indole test
[Ref.: #68369]		indole ChEBI	-	* from API 20NE

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	+	3.1.3.2	* from API zym
[Ref.: #116175]	alcohol dehydrogenase	-	1.1.1.1
[Ref.: #68382]	alkaline phosphatase	+	3.1.3.1	* from API zym
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	-	3.2.1.22	* from API zym
[Ref.: #68382]	alpha-glucosidase	+	3.2.1.20	* from API zym
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #116175]	amylase	-
[Ref.: #68369]	arginine dihydrolase	-	3.5.3.6	* from API 20NE
[Ref.: #116175]	beta-galactosidase	+	3.2.1.23
[Ref.: #68382]	beta-galactosidase	-	3.2.1.23	* from API zym
[Ref.: #68369]	beta-glucosidase	+	3.2.1.21	* from API 20NE
[Ref.: #68382]	beta-glucosidase	-	3.2.1.21	* from API zym
[Ref.: #68382]	beta-glucuronidase	+	3.2.1.31	* from API zym
[Ref.: #116175]	caseinase	-	3.4.21.50
[Ref.: #116175]	catalase	+	1.11.1.6
[Ref.: #68382]	cystine arylamidase	+	3.4.11.3	* from API zym
[Ref.: #68369]	cytochrome oxidase	-	1.9.3.1	* from API 20NE
[Ref.: #116175]	DNase	-
[Ref.: #68382]	esterase (C 4)	+		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	+		* from API zym
[Ref.: #116175]	gelatinase	-
[Ref.: #68369]	gelatinase	-		* from API 20NE
[Ref.: #116175]	lecithinase	-
[Ref.: #68382]	leucine arylamidase	+	3.4.11.1	* from API zym
[Ref.: #116175]	lipase	-
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #116175]	lysine decarboxylase	-	4.1.1.18
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	+		* from API zym
[Ref.: #116175]	ornithine decarboxylase	-	4.1.1.17
[Ref.: #116175]	oxidase	+
[Ref.: #116175]	protease	-
[Ref.: #68382]	trypsin	+	3.4.21.4	* from API zym
[Ref.: #116175]	tryptophan deaminase	-
[Ref.: #116175]	tween esterase	-
[Ref.: #116175]	urease	-	3.5.1.5
[Ref.: #68369]	urease	-	3.5.1.5	* from API 20NE
	Only first 10 entries are displayed. Click here to see all.

API® 20NE:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Reduction of nitratesNO3	Indole productionTRP	Fermentation of D-glucoseGLU_ Ferm	Arginine dihydrolaseADH (Arg)	Urease/urea hydrolysisURE	Esculin hydrolysis/beta-GlucosidaseESC	Gelatinase/gelatin hydrolysisGEL	beta-GalactosidasePNPG	Assimilation of D-glucoseGLU_ Assim	Assimilation of L-arabinoseARA	Assimilation of D-mannoseMNE	Assimilation of D-mannitolMAN	Assimilation of N-acetyl-glucosamineNAG	Assimilation of maltoseMAL	Assimilation of gluconateGNT	Assimilation of capric acidCAP	Assimilation adipic acidADI	Assimilation of malic acidMLT	Assimilation of citric acidCIT	Assimilation of phenyl-acetic acidPAC	Cytochrome oxidaseOX
[Ref.: #56601]	8063	-	-	-	-	-	+	-	-	+	-	-	-	-	+	-	-	-	+	-	-	-

API® Biotype100:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
[Ref.: #116175]	1937	not determinedn.d.	+	-	+	+	-	-	-	-	-	+	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	+	-	-	-	-	-	-	-	+	+	+	+	-	+	+	-	-	+	-

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #56601]	4120	-	+	+	+	-	+	-	+	+	-	+	+	-	-	+	+	-	-	-	-
[Ref.: #116175]	9962	-	+	+	+	-	+	+	+	+	-	+	+	-	-	+	+	-	-	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #5101]	Sample type/isolated from	seawater
[Ref.: #5101]	Geographic location (country and/or sea, region)	Resurrection Bay near Seward, Alaska
[Ref.: #5101]	Country	USA
[Ref.: #5101]	Country ISO 3 Code	USA
[Ref.: #5101]	Continent	North America
[Ref.: #5101]	Geographic location	60.0500°/-149.4170°

[Ref.: #56601]	Sample type/isolated from	Seawater
[Ref.: #56601]	Sampling date	1990
[Ref.: #56601]	Geographic location (country and/or sea, region)	Alaska,near Seward,Resurrection Bay
[Ref.: #56601]	Country	USA
[Ref.: #56601]	Country ISO 3 Code	USA
[Ref.: #56601]	Continent	North America

[Ref.: #116175]	Sample type/isolated from	Environment, Seawater
[Ref.: #116175]	Geographic location (country and/or sea, region)	Seward, Alaska
[Ref.: #116175]	Country	United States of America
[Ref.: #116175]	Country ISO 3 Code	USA
[Ref.: #116175]	Continent	North America
* marker position based on {}

Isolation sources categories

#Environmental

#Aquatic

#Marine

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #5101]	Biosafety level	1	Risk group (German classification) According to TRBA 466
[Ref.: #116175]	Biosafety level	1	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20218]	Sphingomonas sp. RB2256 16S ribosomal RNA gene, partial sequence	AF148812	1406	ENA	94074 tax ID	*
[Ref.: #20218]	Sphingomonas alaskensis strain RB2256 16S ribosomal RNA gene, partial sequence	AF378795	1413	ENA	317655 tax ID	*
[Ref.: #20218]	Sphingopyxis alaskensis 16S ribosomal RNA gene, partial sequence	AY337601	1441	ENA	317655 tax ID	*
[Ref.: #20218]	Alpha proteobacterium (strain RB2256) 16S rRNA gene, partial sequence	U11041	725	ENA	34025 tax ID	*
[Ref.: #20218]	Sphingopyxis alaskensis 16S rRNA gene, strain RB2256	Z73631	1445	ENA	317655 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Sphingopyxis alaskensis RB2256	317655.17	complete	PATRIC	317655 tax ID	*
[Ref.: #66792]	Sphingopyxis alaskensis RB2256	317655.30	plasmid	PATRIC	317655 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Sphingopyxis alaskensis RB2256 PATRIC: 317655.17
[Ref.: #69481]	spore-forming	no	99	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Sphingopyxis alaskensis RB2256 PATRIC: 317655.17
[Ref.: #69480]	gram-positive	no	97.536	no
[Ref.: #69480]	anaerobic	no	99.354	yes
[Ref.: #69480]	halophile	no	94.637	no
[Ref.: #69480]	spore-forming	no	94.845	no
[Ref.: #69480]	glucose-util	yes	85.154	yes
[Ref.: #69480]	flagellated	no	80.231	no
[Ref.: #69480]	aerobic	yes	92.283	yes
[Ref.: #69480]	motile	yes	68.38	no
[Ref.: #69480]	thermophile	no	89.571	yes
[Ref.: #69480]	glucose-ferment	no	93.186	yes

Availability in culture collections External links

[Ref.: #5101]

Culture collection no.

DSM 13593, LMG 18877, CCUG 45028, CIP 106977, RB 2256

[Ref.: #83428]

SI-ID 12488

Literature:

Only first 10 entries are displayed. Click here to see all.

Topic	Title	Authors	Journal	DOI	Year
Enzymology	Distribution and characterization of N-acylhomoserine lactone (AHL)-degrading activity and AHL lactonase gene (qsdS) in Sphingopyxis.	Morohoshi T, Kamimura Y, Sato N, Iizumi T	J Biosci Bioeng	10.1016/j.jbiosc.2018.10.005	2018	*
Phylogeny	Sphingopyxis solisilvae sp. nov., isolated from forest soil.	Chaudhary DK, Dahal RH, Kim J	Int J Syst Evol Microbiol	10.1099/ijsem.0.001869	2017	*
Metabolism	Structure and Mechanism of the Sphingopyxin I Lasso Peptide Isopeptidase.	Fage CD, Hegemann JD, Nebel AJ, Steinbach RM, Zhu S, Linne U, Harms K, Bange G, Marahiel MA	Angew Chem Int Ed Engl	10.1002/anie.201605232	2016	*
Phylogeny	Sphingopyxis italica sp. nov., isolated from Roman catacombs.	Alias-Villegas C, Jurado V, Laiz L, Saiz-Jimenez C	Int J Syst Evol Microbiol	10.1099/ijs.0.046573-0	2012	*
Metabolism	In vivo and in vitro studies on the carotenoid cleavage oxygenases from Sphingopyxis alaskensis RB2256 and Plesiocystis pacifica SIR-1 revealed their substrate specificities and non-retinal-forming cleavage activities.	Hoffmann J, Bona-Lovasz J, Beuttler H, Altenbuchner J	FEBS J	10.1111/j.1742-4658.2012.08751.x	2012	*
Metabolism	Metagenomic analysis of 0.2-mum-passable microorganisms in deep-sea hydrothermal fluid.	Nakai R, Abe T, Takeyama H, Naganuma T	Mar Biotechnol (NY)	10.1007/s10126-010-9351-6	2011	*
Phylogeny	Sphingopyxis panaciterrulae sp. nov., isolated from soil of a ginseng field.	Srinivasan S, Kim MK, Sathiyaraj G, Veena V, Mahalakshmi M, Kalaiselvi S, Kim YJ, Yang DC	Int J Syst Evol Microbiol	10.1099/ijs.0.019414-0	2009	*
Genetics	The genomic basis of trophic strategy in marine bacteria.	Lauro FM, McDougald D, Thomas T, Williams TJ, Egan S, Rice S, DeMaere MZ, Ting L, Ertan H, Johnson J, Ferriera S, Lapidus A, Anderson I, Kyrpides N, Munk AC, Detter C, Han CS, Brown MV, Robb FT, Kjelleberg S, Cavicchioli R	Proc Natl Acad Sci U S A	10.1073/pnas.0903507106	2009	*
Phylogeny	Sphingopyxis soli sp. nov., isolated from landfill soil.	Choi JH, Kim MS, Jung MJ, Roh SW, Shin KS, Bae JW	Int J Syst Evol Microbiol	10.1099/ijs.0.013128-0	2009	*
Proteome	The response of the marine bacterium Sphingopyxis alaskensis to solar radiation assessed by quantitative proteomics.	Matallana-Surget S, Joux F, Raftery MJ, Cavicchioli R	Environ Microbiol	10.1111/j.1462-2920.2009.01992.x	2009	*
Metabolism	Carbon and nitrogen substrate utilization in the marine bacterium Sphingopyxis alaskensis strain RB2256.	Williams TJ, Ertan H, Ting L, Cavicchioli R	ISME J	10.1038/ismej.2009.52	2009	*
Phylogeny	Sphingopyxis chilensis sp. nov., a chlorophenol-degrading bacterium that accumulates polyhydroxyalkanoate, and transfer of Sphingomonas alaskensis to Sphingopyxis alaskensis comb. nov.	Godoy F, Vancanneyt M, Martinez M, Steinbuchel A, Swings J, Rehm BHA	Int J Syst Evol Microbiol	10.1099/ijs.0.02375-0	2003	*
Phylogeny	Sphingomonas alaskensis strain AFO1, an abundant oligotrophic ultramicrobacterium from the North Pacific.	Eguchi M, Ostrowski M, Fegatella F, Bowman J, Nichols D, Nishino T, Cavicchioli R	Appl Environ Microbiol	10.1128/AEM.67.11.4945-4954.2001	2001	*
Metabolism	Specific growth rate plays a critical role in hydrogen peroxide resistance of the marine oligotrophic ultramicrobacterium sphingomonas alaskensis strain RB2256.	Ostrowski M, Cavicchioli R, Blaauw M, Gottschal JC	Appl Environ Microbiol	10.1128/AEM.67.3.1292-1299.2001	2001	*
Phylogeny	Sphingomonas alaskensis sp. nov., a dominant bacterium from a marine oligotrophic environment.	Vancanneyt M, Schut F, Snauwaert C, Goris J, Swings J, Gottschal JC	Int J Syst Evol Microbiol	10.1099/00207713-51-1-73	2001	*

References

#5101

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 13593

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#37377 ; Curators of the CIP;
#56601 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 45028

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#68369

Automatically annotated from API 20NE .

#68382

Automatically annotated from API zym .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#83428

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID12488.1 )

#116175 Collection of Institut Pasteur ; Curators of the CIP; CIP 106977
* These data were automatically processed and therefore are not curated

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Search for species Sphingopyxis alaskensis in external resources:
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Sphingopyxis alaskensis RB2256

Sphingopyxis alaskensis RB2256

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Change proposal