Listonella anguillarum CCUG 13446 is an aerobe bacterium of the family Vibrionaceae.
aerobe genome sequence Bacteria| @ref 20215 |
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| Domain Bacteria |
| Phylum Pseudomonadota |
| Class Gammaproteobacteria |
| Order "Vibrionales" |
| Family Vibrionaceae |
| Genus Listonella |
| Species Listonella anguillarum |
| Full scientific name Listonella anguillarum corrig. (Bergman 1909) MacDonell and Colwell 1986 |
| Synonyms (2) |
| BacDive ID | Other strains from Listonella anguillarum (6) | Type strain |
|---|---|---|
| 17279 | L. anguillarum DSM 21597, ATCC 19264, CAIM 696, CCTM 2283, ... (type strain) | |
| 17278 | L. anguillarum 151/82, DSM 11323, IMET 10870 | |
| 130757 | L. anguillarum CH 1356, DSM 12900 | |
| 138556 | L. anguillarum CIP 64.14, NCIMB 407 | |
| 143853 | L. anguillarum CCUG 21571 | |
| 159367 | L. anguillarum IC18_D7, DSM 107285 |
| @ref | Growth | Type | Temperature (°C) | |
|---|---|---|---|---|
| 45952 | positive | growth | 26 |
| @ref | Spore formation | Confidence | |
|---|---|---|---|
| 125439 | 99.4 |
| Metadata FA analysis | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| type of FA analysis | whole cell analysis | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| method/protocol | CCUG | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| @ref | 45952 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 66792 | Va_14181_F1 assembly for Vibrio anguillarum ATCC 14181 | contig | 55601 | 35.97 |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | spore_formation | BacteriaNetⓘ | no | 99.40 | no |
| 125439 | motility | BacteriaNetⓘ | yes | 77.40 | no |
| 125439 | gram_stain | BacteriaNetⓘ | negative | 99.10 | no |
| 125439 | oxygen_tolerance | BacteriaNetⓘ | obligate aerobe | 94.80 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | no | 99.92 | no |
| 125438 | anaerobic | anaerobicⓘ | no | 95.99 | yes |
| 125438 | spore-forming | spore-formingⓘ | no | 89.90 | no |
| 125438 | aerobic | aerobicⓘ | no | 58.08 | yes |
| 125438 | thermophilic | thermophileⓘ | no | 99.50 | yes |
| 125438 | flagellated | motile2+ⓘ | yes | 90.17 | no |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Enzymology | Simultaneous detection of marine fish pathogens by using multiplex PCR and a DNA microarray. | Gonzalez SF, Krug MJ, Nielsen ME, Santos Y, Call DR. | J Clin Microbiol | 10.1128/jcm.42.4.1414-1419.2004 | 2004 | |
| Genetics | Draft Genome Sequence of Vibrio (Listonella) anguillarum ATCC 14181. | Grim CJ, Schreier HJ | Genome Announc | 10.1128/genomeA.01185-16 | 2016 | |
| Genetics | Genome sequence of Vibrio anguillarum isolates carrying a novel class A beta-lactamase VAN-1: do migratory fish transport novel resistance factors? | Nimje PS, Marathe NP | J Glob Antimicrob Resist | 10.1016/j.jgar.2022.10.017 | 2022 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #45952 | Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 13446 |
| #66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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https://doi.org/10.13145/bacdive142630.20251217.10
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