Sphingomonas paucimobilis CL 1/70 | Type strain | DSM 1098, ATCC 29837, NCPPB 3838, NCTC 11030

Strain identifier

BacDive ID: 14201

Type strain:

Species: Sphingomonas paucimobilis

Strain Designation: CL 1/70

Culture col. no.: DSM 1098, ATCC 29837, NCPPB 3838, NCTC 11030

Section

Name and taxonomic classification
Morphology and physiology
Culture and growth conditions
Isolation, sampling and environmental information
Application and interaction
Molecular biology
Strain availability

External links

Information on the name and the taxonomic classification.Name and taxonomic classification

[Ref.: #548]	Domain	Bacteria
[Ref.: #548]	Phylum	Proteobacteria
[Ref.: #548]	Class	Alphaproteobacteria
[Ref.: #548]	Order	Sphingomonadales
[Ref.: #548]	Family	Sphingomonadaceae
[Ref.: #548]	Genus	Sphingomonas
[Ref.: #548]	Species	Sphingomonas paucimobilis
[Ref.: #548]	Full Scientific Name	Sphingomonas paucimobilis (Holmes et al. 1977) Yabuuchi et al. 1990
[Ref.: #548]	Strain Designation	CL 1/70
[Ref.: #548]	Type strain

		Prokaryotic Nomenclature Up-to-date (PNU)	Taxonomical status	Literature reference
	Last PNU update	26-03-2019 (DD-MM-YYYY)
[Ref.: #20215]	Domain	Bacteria
[Ref.: #20215]	Phylum	Proteobacteria
[Ref.: #20215]	Class	Alphaproteobacteria		Int. J. Syst. Evol. Microbiol. 56:1
[Ref.: #20215]	Family	Sphingomonadaceae
[Ref.: #20215]	Genus	Sphingomonas	gen. nov. (VL)	Int. J. Syst. Bacteriol. 40:320
[Ref.: #20215]	Species	Sphingomonas paucimobilis	comb. nov. (VL)	Int. J. Syst. Bacteriol. 40:320
[Ref.: #20215]	Full Scientific Name	Sphingomonas paucimobilis (Holmes et al. 1977) Yabuuchi et al. 1990

[Ref.: #20215]	Synonym	Flavobacterium devorans
[Ref.: #20215]	Synonym	Pseudomonas paucimobilis

Information on morphological and physiological propertiesMorphology and physiology

API® 20NE:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Reduction of nitratesNO3	Indole productionTRP	Fermentation of D-glucoseGLU_ Ferm	Arginine dihydrolaseADH (Arg)	Urease/urea hydrolysisURE	Esculin hydrolysis/beta-GlucosidaseESC	Gelatinase/gelatin hydrolysisGEL	beta-GalactosidasePNPG	Assimilation of D-glucoseGLU_ Assim	Assimilation of L-arabinoseARA	Assimilation of D-mannoseMNE	Assimilation of D-mannitolMAN	Assimilation of N-acetyl-glucosamineNAG	Assimilation of maltoseMAL	Assimilation of gluconateGNT	Assimilation of capric acidCAP	Assimilation adipic acidADI	Assimilation of malic acidMLT	Assimilation of citric acidCIT	Assimilation of phenyl-acetic acidPAC	Cytochrome oxidaseOX
[Ref.: #548]	5614	-	-	-	-	-	+	-	+	+	+	+	-	+	+	-	-	-	+	-	-	+

Information on culture and growth conditionsCulture and growth conditions

[Ref.: #548]

Culture medium

NUTRIENT AGAR (DSMZ Medium 1), 30°C

[Ref.: #548]

Culture medium growth

[Ref.: #548]

Culture medium link

medium recipe provided by DSMZ

[Ref.: #36454]

Culture medium

MEDIUM 72- for trypto casein soja agar

[Ref.: #36454]

Culture medium growth

[Ref.: #36454]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #548]			growth	30 ̊C
[Ref.: #36454]			growth	30 ̊C

[Ref.: #548]	Temperature range	mesophilic
[Ref.: #36454]	Temperature range	mesophilic

Information on isolation source, the sampling and environmental conditionsIsolation, sampling and environmental information

[Ref.: #548]

Sample type/isolated from

hospital respirator

[Ref.: #548]

Geographic location (country and/or sea, region)

London

[Ref.: #548]

Country

United Kingdom

[Ref.: #548]

Continent

Europe

Isolation sources categories

#Medical	#Medical device	-
#Medical	#Medical environment	#Clinic

What are isolation sources categories?

* marker position based on {}

Information on possible application of the strain and its possible interaction with e.g. potential hostsApplication and interaction

[Ref.: #548]

Biosafety level

Risk group (German classification)

Information on genomic background e.g. entries in nucleic sequence databassMolecular biology

[Ref.: #548]	GC-content	65.5 mol%	thermal denaturation, midpoint method (Tm)
[Ref.: #548]	GC-content	65.0 mol%

Sequence information:

	Sequence database	Sequence accession description	Sequence accession number	Sequence type	Sequence length (bp)	Associated NCBI tax ID
[Ref.: #20218]	Marker Gene (EMBL Direct submission)	Sphingomonas paucimobilis partial 16S rRNA gene, isolate OS-64.a	AM237364	16S	1431	13689	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Sphingomonas paucimobilis 16S small subunit ribosomal RNA gene, partial sequence	U20776	16S	1231	13689	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Sphingomonas paucimobilis strain ATCC 29837 16S ribosomal RNA (rrn) gene, partial sequence	U37337	16S	1414	13689	*
[Ref.: #548]	INSDC	Sphingomonas paucimobilis partial 16S rRNA gene, type strain DSM 1098T	LN681566	16S	1441	13689
[Ref.: #548]	EMBL Direct submission	Sphingomonas paucimobilis partial 16S rRNA gene	X72722	16S	1462	13689

Availability in culture collectionsStrain availability

[Ref.: #548]

Culture collection no.

DSM 1098, ATCC 29837, NCPPB 3838, NCTC 11030

[Ref.: #548]

Strain history

<- NCTC <- B. Holmes; CL 1/70

[Ref.: #20218]

Associated Passport(s) in StrainInfo

21701, 21694, 157162, 21708

References

#548	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 1098

#20215

Leibniz Institute DSMZ D.Gleim, M.Kracht, N.Weiss et. al.: Prokaryotic Nomenclature Up-to-date - compilation of all names of Bacteria and Archaea, validly published according to the Bacteriological Code since 1. Jan. 1980, and validly published nomenclatural changes since .

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#36454 ; Curators of the CIP;
* These References are textmined

Change proposal

You found an error in BacDive? Please tell us about it!

Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.

Search for species Sphingomonas paucimobilis in external resources:
SILVA
BRENDA
PANGAEA
StrainInfo
GBIF