Novosphingobium pentaromativorans US6-1 | Type strain | CCUG 56449, CIP 108548, DSM 17173, JCM 12182, KCTC 10454

Strain identifier

BacDive ID: 14152

Type strain:

Species: Novosphingobium pentaromativorans

Strain Designation: US6-1

Culture col. no.: CCUG 56449, CIP 108548, DSM 17173, JCM 12182, KCTC 10454

Section

Name and taxonomic classification
Morphology and physiology
Culture and growth conditions
Isolation, sampling and environmental information
Application and interaction
Molecular biology
Strain availability

External links

Novosphingobium pentaromativorans US6-1 is a facultative anaerobe, mesophilic, gram-negative bacterium that was isolated from muddy sediment.

gram-negative
rod-shaped
facultative anaerobe
mesophilic
Bacteria
genome sequence

Information on the name and the taxonomic classification.Name and taxonomic classification

	Last LPSN update	10-09-2020 (DD-MM-YYYY)
	Domain	Bacteria
	Phylum	Proteobacteria
	Class	Alphaproteobacteria
	Order	Sphingomonadales
	Family	Erythrobacteraceae
	Genus	Novosphingobium
	Species	Novosphingobium pentaromativorans
	Full Scientific Name (PNU)	Novosphingobium pentaromativorans Sohn et al. 2004

Information on morphological and physiological propertiesMorphology and physiology

[Ref.: #30105]	Gram stain	negative
[Ref.: #30105]	Cell length	0.97-1.95 µm
[Ref.: #30105]	Cell width	0.36-0.45 µm
[Ref.: #30105]	Cell shape	rod-shaped
[Ref.: #30105]	Motility	no

[Ref.: #60963]

Incubation period

2 days

	Enzymes	Enzyme	Enzyme activity	EC number
[Ref.: #30105]		catalase	+	1.11.1.6

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #30105]		NaCl		growth	01-06	%
[Ref.: #30105]		NaCl		optimum	2.5	%

API® 20NE:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Reduction of nitratesNO3	Indole productionTRP	Fermentation of D-glucoseGLU_ Ferm	Arginine dihydrolaseADH (Arg)	Urease/urea hydrolysisURE	Esculin hydrolysis/beta-GlucosidaseESC	Gelatinase/gelatin hydrolysisGEL	beta-GalactosidasePNPG	Assimilation of D-glucoseGLU_ Assim	Assimilation of L-arabinoseARA	Assimilation of D-mannoseMNE	Assimilation of D-mannitolMAN	Assimilation of N-acetyl-glucosamineNAG	Assimilation of maltoseMAL	Assimilation of gluconateGNT	Assimilation of capric acidCAP	Assimilation adipic acidADI	Assimilation of malic acidMLT	Assimilation of citric acidCIT	Assimilation of phenyl-acetic acidPAC	Cytochrome oxidaseOX
[Ref.: #6807]	9152	-	-	-	-	-	+	-	-	+	-	-	-	-	+	-	-	-	-	-	+	+

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #30105]	esculin ChEBI	+	hydrolysis
[Ref.: #30105]	glucose ChEBI	+	carbon source
[Ref.: #30105]	maltose ChEBI	+	carbon source
[Ref.: #30105]	nitrate ChEBI	+	reduction
[Ref.: #30105]	phenylacetate ChEBI	+	carbon source

[Ref.: #30105]	Oxygen tolerance	facultative anaerobe
[Ref.: #60963]	Oxygen tolerance	aerobe

Information on culture and growth conditionsCulture and growth conditions

[Ref.: #6807]

Culture medium

TRYPTICASE SOY BROTH AGAR (TSBA, DSMZ Medium 535)

[Ref.: #6807]

Culture medium growth

[Ref.: #6807]

Culture medium link

medium recipe provided by DSMZ

[Ref.: #6807]

Culture medium

MINERAL MEDIUM (BRUNNER) (DSMZ Medium 457), 30°C, with pyrene which is sublimated onto inoculated agar plates of medium 457

[Ref.: #6807]

Culture medium growth

[Ref.: #6807]

Culture medium link

medium recipe provided by DSMZ

[Ref.: #38179]

Culture medium

Marine agar (MA)

[Ref.: #38179]

Culture medium growth

[Ref.: #38179]

Culture medium composition

expand / minimize

		Temperature
[Ref.: #6807]	growth	30 ̊C
[Ref.: #30105]	optimum	30 ̊C
[Ref.: #38179]	growth	30 ̊C
[Ref.: #60963]	growth	30 ̊C

[Ref.: #6807]	Temperature range	mesophilic
[Ref.: #30105]	Temperature range	mesophilic
[Ref.: #38179]	Temperature range	mesophilic
[Ref.: #60963]	Temperature range	mesophilic

	pH	Kind of pH		pH
[Ref.: #30105]			optimum	6.5
[Ref.: #30105]			growth	06-09

Information on isolation source, the sampling and environmental conditionsIsolation, sampling and environmental information

[Ref.: #6807]

Sample type/isolated from

muddy sediment

[Ref.: #6807]

Geographic location (country and/or sea, region)

Ulsan Bay

[Ref.: #6807]

Country

Republic of Korea

[Ref.: #6807]

Country ISO 3 Code

KOR

[Ref.: #6807]

Continent

Asia

[Ref.: #60963]

Sample type/isolated from

Muddy sediment

[Ref.: #60963]

Geographic location (country and/or sea, region)

Ulsan Bay

[Ref.: #60963]

Country

Republic of Korea

[Ref.: #60963]

Country ISO 3 Code

KOR

[Ref.: #60963]

Continent

Asia

Isolation sources categories

#Environmental	#Terrestrial	#Mud (Sludge)
#Environmental	#Terrestrial	#Sediment

What are isolation sources categories?

* marker position based on {}

Information on possible application of the strain and its possible interaction with e.g. potential hostsApplication and interaction

[Ref.: #6807]

Biosafety level

Risk group (German classification)

Information on genomic background e.g. entries in nucleic sequence databassMolecular biology

[Ref.: #30105]

GC-content

61.1 mol%

Sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence database	Sequence accession description	Sequence accession number	Sequence type	Sequence length (bp)	Associated NCBI tax ID
[Ref.: #6807]	plasmid pLA4, GenBank Genome project data	Novosphingobium pentaromativorans US6-1 plasmid pLA4, complete sequence	CP009293 ENA		335704	1088721 tax ID
[Ref.: #6807]	plasmid pLA5, GenBank Genome project data	Novosphingobium pentaromativorans US6-1 plasmid pLA5, complete sequence	CP009295 ENA		134722	1088721 tax ID
[Ref.: #6807]	plasmid pLA3, GenBank Genome project data	Novosphingobium pentaromativorans US6-1 plasmid pLA3, complete sequence	CP009292 ENA		756828	1088721 tax ID
[Ref.: #6807]	plasmid pLA1, GenBank Genome project data	Novosphingobium pentaromativorans US6-1 plasmid pLA1, complete sequence	CP009294 ENA		188477	1088721 tax ID
[Ref.: #6807]	plasmid pLA2, GenBank Genome project data	Novosphingobium pentaromativorans US6-1 plasmid pLA2, complete sequence	CP009296 ENA		62341	1088721 tax ID
[Ref.: #6807]	INSDC		GCA_000767465 ENA
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00001, whole genome shotgun sequence	AGFM01000001 ENA	WGS	6571	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00002, whole genome shotgun sequence	AGFM01000002 ENA	WGS	107579	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00003, whole genome shotgun sequence	AGFM01000003 ENA	WGS	2019	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00004, whole genome shotgun sequence	AGFM01000004 ENA	WGS	40316	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00005, whole genome shotgun sequence	AGFM01000005 ENA	WGS	50317	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00006, whole genome shotgun sequence	AGFM01000006 ENA	WGS	163171	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00007, whole genome shotgun sequence	AGFM01000007 ENA	WGS	143707	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00008, whole genome shotgun sequence	AGFM01000008 ENA	WGS	178935	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00009, whole genome shotgun sequence	AGFM01000009 ENA	WGS	263131	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00010, whole genome shotgun sequence	AGFM01000010 ENA	WGS	32238	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00011, whole genome shotgun sequence	AGFM01000011 ENA	WGS	45250	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00012, whole genome shotgun sequence	AGFM01000012 ENA	WGS	33194	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00013, whole genome shotgun sequence	AGFM01000013 ENA	WGS	33955	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00014, whole genome shotgun sequence	AGFM01000014 ENA	WGS	147320	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00015, whole genome shotgun sequence	AGFM01000015 ENA	WGS	35441	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00016, whole genome shotgun sequence	AGFM01000016 ENA	WGS	35802	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00017, whole genome shotgun sequence	AGFM01000017 ENA	WGS	210228	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00018, whole genome shotgun sequence	AGFM01000018 ENA	WGS	79111	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00019, whole genome shotgun sequence	AGFM01000019 ENA	WGS	42459	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00020, whole genome shotgun sequence	AGFM01000020 ENA	WGS	817	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00021, whole genome shotgun sequence	AGFM01000021 ENA	WGS	28749	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00022, whole genome shotgun sequence	AGFM01000022 ENA	WGS	19789	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00023, whole genome shotgun sequence	AGFM01000023 ENA	WGS	3778	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00024, whole genome shotgun sequence	AGFM01000024 ENA	WGS	103314	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00025, whole genome shotgun sequence	AGFM01000025 ENA	WGS	50256	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00026, whole genome shotgun sequence	AGFM01000026 ENA	WGS	28920	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00027, whole genome shotgun sequence	AGFM01000027 ENA	WGS	72013	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00028, whole genome shotgun sequence	AGFM01000028 ENA	WGS	92873	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00029, whole genome shotgun sequence	AGFM01000029 ENA	WGS	135438	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00030, whole genome shotgun sequence	AGFM01000030 ENA	WGS	84430	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00031, whole genome shotgun sequence	AGFM01000031 ENA	WGS	40891	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00032, whole genome shotgun sequence	AGFM01000032 ENA	WGS	3856	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00033, whole genome shotgun sequence	AGFM01000033 ENA	WGS	66731	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00034, whole genome shotgun sequence	AGFM01000034 ENA	WGS	17201	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00035, whole genome shotgun sequence	AGFM01000035 ENA	WGS	20516	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00036, whole genome shotgun sequence	AGFM01000036 ENA	WGS	34690	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00037, whole genome shotgun sequence	AGFM01000037 ENA	WGS	119599	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00038, whole genome shotgun sequence	AGFM01000038 ENA	WGS	95497	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00039, whole genome shotgun sequence	AGFM01000039 ENA	WGS	131253	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00040, whole genome shotgun sequence	AGFM01000040 ENA	WGS	50573	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00041, whole genome shotgun sequence	AGFM01000041 ENA	WGS	9335	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00042, whole genome shotgun sequence	AGFM01000042 ENA	WGS	28694	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00043, whole genome shotgun sequence	AGFM01000043 ENA	WGS	50433	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00044, whole genome shotgun sequence	AGFM01000044 ENA	WGS	32318	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00045, whole genome shotgun sequence	AGFM01000045 ENA	WGS	43398	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00046, whole genome shotgun sequence	AGFM01000046 ENA	WGS	2019	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00047, whole genome shotgun sequence	AGFM01000047 ENA	WGS	55358	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00048, whole genome shotgun sequence	AGFM01000048 ENA	WGS	57832	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00049, whole genome shotgun sequence	AGFM01000049 ENA	WGS	31638	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00050, whole genome shotgun sequence	AGFM01000050 ENA	WGS	8979	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00051, whole genome shotgun sequence	AGFM01000051 ENA	WGS	33275	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00052, whole genome shotgun sequence	AGFM01000052 ENA	WGS	8274	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00053, whole genome shotgun sequence	AGFM01000053 ENA	WGS	47168	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00054, whole genome shotgun sequence	AGFM01000054 ENA	WGS	235979	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00055, whole genome shotgun sequence	AGFM01000055 ENA	WGS	117882	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00056, whole genome shotgun sequence	AGFM01000056 ENA	WGS	40805	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00057, whole genome shotgun sequence	AGFM01000057 ENA	WGS	7964	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00058, whole genome shotgun sequence	AGFM01000058 ENA	WGS	247902	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00059, whole genome shotgun sequence	AGFM01000059 ENA	WGS	13667	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00060, whole genome shotgun sequence	AGFM01000060 ENA	WGS	6744	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00061, whole genome shotgun sequence	AGFM01000061 ENA	WGS	69899	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00062, whole genome shotgun sequence	AGFM01000062 ENA	WGS	134600	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00063, whole genome shotgun sequence	AGFM01000063 ENA	WGS	21554	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00064, whole genome shotgun sequence	AGFM01000064 ENA	WGS	222162	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00065, whole genome shotgun sequence	AGFM01000065 ENA	WGS	122119	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00066, whole genome shotgun sequence	AGFM01000066 ENA	WGS	60266	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00067, whole genome shotgun sequence	AGFM01000067 ENA	WGS	2875	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00068, whole genome shotgun sequence	AGFM01000068 ENA	WGS	3434	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00069, whole genome shotgun sequence	AGFM01000069 ENA	WGS	2390	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00070, whole genome shotgun sequence	AGFM01000070 ENA	WGS	3030	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00071, whole genome shotgun sequence	AGFM01000071 ENA	WGS	14917	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00072, whole genome shotgun sequence	AGFM01000072 ENA	WGS	9451	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00073, whole genome shotgun sequence	AGFM01000073 ENA	WGS	5283	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00074, whole genome shotgun sequence	AGFM01000074 ENA	WGS	17016	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00075, whole genome shotgun sequence	AGFM01000075 ENA	WGS	16503	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00076, whole genome shotgun sequence	AGFM01000076 ENA	WGS	35269	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00077, whole genome shotgun sequence	AGFM01000077 ENA	WGS	22140	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00078, whole genome shotgun sequence	AGFM01000078 ENA	WGS	17871	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00079, whole genome shotgun sequence	AGFM01000079 ENA	WGS	10254	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00080, whole genome shotgun sequence	AGFM01000080 ENA	WGS	14964	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00081, whole genome shotgun sequence	AGFM01000081 ENA	WGS	30132	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00082, whole genome shotgun sequence	AGFM01000082 ENA	WGS	6204	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00083, whole genome shotgun sequence	AGFM01000083 ENA	WGS	19673	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00084, whole genome shotgun sequence	AGFM01000084 ENA	WGS	10364	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00085, whole genome shotgun sequence	AGFM01000085 ENA	WGS	18738	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00086, whole genome shotgun sequence	AGFM01000086 ENA	WGS	6248	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00087, whole genome shotgun sequence	AGFM01000087 ENA	WGS	27425	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00088, whole genome shotgun sequence	AGFM01000088 ENA	WGS	33968	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00089, whole genome shotgun sequence	AGFM01000089 ENA	WGS	3242	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00090, whole genome shotgun sequence	AGFM01000090 ENA	WGS	1705	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00091, whole genome shotgun sequence	AGFM01000091 ENA	WGS	16134	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00092, whole genome shotgun sequence	AGFM01000092 ENA	WGS	11658	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00093, whole genome shotgun sequence	AGFM01000093 ENA	WGS	29427	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00094, whole genome shotgun sequence	AGFM01000094 ENA	WGS	45856	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00095, whole genome shotgun sequence	AGFM01000095 ENA	WGS	8135	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00096, whole genome shotgun sequence	AGFM01000096 ENA	WGS	16339	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00097, whole genome shotgun sequence	AGFM01000097 ENA	WGS	22963	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00098, whole genome shotgun sequence	AGFM01000098 ENA	WGS	9529	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00099, whole genome shotgun sequence	AGFM01000099 ENA	WGS	5888	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00100, whole genome shotgun sequence	AGFM01000100 ENA	WGS	3796	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00101, whole genome shotgun sequence	AGFM01000101 ENA	WGS	3557	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00102, whole genome shotgun sequence	AGFM01000102 ENA	WGS	2836	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00103, whole genome shotgun sequence	AGFM01000103 ENA	WGS	2725	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00104, whole genome shotgun sequence	AGFM01000104 ENA	WGS	2291	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00105, whole genome shotgun sequence	AGFM01000105 ENA	WGS	2240	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00106, whole genome shotgun sequence	AGFM01000106 ENA	WGS	1778	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00107, whole genome shotgun sequence	AGFM01000107 ENA	WGS	1768	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00108, whole genome shotgun sequence	AGFM01000108 ENA	WGS	1688	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00109, whole genome shotgun sequence	AGFM01000109 ENA	WGS	1640	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00110, whole genome shotgun sequence	AGFM01000110 ENA	WGS	1557	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00111, whole genome shotgun sequence	AGFM01000111 ENA	WGS	1390	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00112, whole genome shotgun sequence	AGFM01000112 ENA	WGS	1362	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00113, whole genome shotgun sequence	AGFM01000113 ENA	WGS	1291	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00114, whole genome shotgun sequence	AGFM01000114 ENA	WGS	860	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00115, whole genome shotgun sequence	AGFM01000115 ENA	WGS	757	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00116, whole genome shotgun sequence	AGFM01000116 ENA	WGS	741	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00117, whole genome shotgun sequence	AGFM01000117 ENA	WGS	725	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00118, whole genome shotgun sequence	AGFM01000118 ENA	WGS	586	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00119, whole genome shotgun sequence	AGFM01000119 ENA	WGS	586	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00121, whole genome shotgun sequence	AGFM01000120 ENA	WGS	517	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 contig00122, whole genome shotgun sequence	AGFM01000121 ENA	WGS	505	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 plasmid pLA1, whole genome shotgun sequence	AGFM01000122 ENA	WGS	188476	1088721 tax ID	*
[Ref.: #20218]	Whole Genome Shotgun (WGS) Sequence INSDC	Novosphingobium pentaromativorans US6-1 plasmid pLA2, whole genome shotgun sequence	AGFM01000123 ENA	WGS	60085	1088721 tax ID	*
[Ref.: #30105]	GenBank/EMBL/DDBJ	Novosphingobium pentaromativorans strain US6-1 16S ribosomal RNA gene, partial sequence	AF502400 GenBank	16S	1481	1088721 tax ID

Availability in culture collectionsStrain availability

[Ref.: #6807]

Culture collection no.

CCUG 56449, CIP 108548, DSM 17173, JCM 12182, KCTC 10454

[Ref.: #6807]

Strain history

<- JCM <- K. K. Kwon; US6-1

[Ref.: #20218]

Associated Passport(s) in StrainInfo

556099, 381482, 381483

References

#6807

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 17173

#20215

Leibniz Institute DSMZ D.Gleim, M.Kracht, N.Weiss et. al.: Prokaryotic Nomenclature Up-to-date - compilation of all names of Bacteria and Archaea, validly published according to the Bacteriological Code since 1. Jan. 1980, and validly published nomenclatural changes since .

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#30105

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 ) - originally annotated from #26461 (see below)

#38179 ; Curators of the CIP;
#60963 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 56449

#26461

IJSEM 1483 2004 ( DOI 10.1099/ijs.0.02945-0 )

* These References are textmined

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