Novosphingobium capsulatum (DSM 30196, ATCC 14666, GIFU 11526)

Name: Novosphingobium capsulatum (DSM 30196, ATCC 14666, GIFU 11526)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 14144

Type strain

Strain Designation 28

Culture col. no. DSM 30196 ATCC 14666 GIFU 11526 IAM 14271 IFO 12533 16 more

NCBI tax ID(s) 1219042 13688

Special Collections DSMZ CCUG JCM CIP KCTC

History DSMZ <- ATCC <- E. Leifson; 28 JCM <-- H. Oyaizu KS 0413 <-- IFO 12533 <-- AJ 2514 <-- ATCC 14666 <-- E. Leifson 28. CIP <- 1982, F. Pichinoty, CNRS, Marseille, France <- ATCC <- E. Leifson: strain 28, Flavobacterium capsulatum

Links

Novosphingobium capsulatum 28 is an obligate aerobe, Gram-negative, rod-shaped bacterium that was isolated from distilled water.

Gram-negative rod-shaped obligate aerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 9366

LMG 2830,ATCC 14666,CCM 2832,CCRC 10676,CCUG 17697,CCUG 31202,DSM 30196,IFO 12533,JCM 7452,JCM 7508,NCIMB 9890,VTT E-76059,NCIB 9890,IAM 14271,CECT 4388,HAMBI 103,NBRC 12533,NRRL B-4261,BCRC 10676,CCT 1458,CDBB 798,VKM B-1564,CIP 82.103,VTT E-91059,KCTC 22844

@ref 20215

Last LPSN update 2026-05-29 08:28:13

Domain Bacteria

Phylum Pseudomonadota

Class Alphaproteobacteria

Order Sphingomonadales

Family Erythrobacteraceae

Genus Novosphingobium

Species Novosphingobium capsulatum

Full scientific name Novosphingobium capsulatum (Leifson 1962) Takeuchi et al. 2001

Synonyms (2)

Sphingomonas capsulata
Flavobacterium capsulatum

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Confidence
125439	negative		98.283
125438	negative		94.753
117175	negative	rod-shaped

Multimedia

@ref:	9195
multimedia content:	DSM_30196.jpg
multimedia.multimedia content:	https://www.dsmz.de/microorganisms/photos/DSM_30196.jpg
intellectual property rights:	© Leibniz-Institut DSMZ
manual_annotation:	1

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
9195	NUTRIENT AGAR (DSMZ Medium 1)	Medium recipe at MediaDive	Name: NUTRIENT AGAR (DSMZ Medium 1) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled water
38753	MEDIUM 3 - Columbia agar		Columbia agar (39.000 g);distilled water (1000.000 ml)
117175	CIP Medium 72	Medium recipe at CIP
117175	CIP Medium 3	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)
9195	positive	growth	26
38753	positive	growth	30
67770	positive	growth	30

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
117175	obligate aerobe
125439	aerobe	94.111

Spore formation

@ref	Spore formation	Confidence
125439		99.434

Observation

67770

Observationquinones: Q-10

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68369	17128 ChEBI	adipate	-	assimilation	from API 20NE
68369	29016 ChEBI	arginine	-	hydrolysis	from API 20NE
68369	17634 ChEBI	D-glucose	+	assimilation	from API 20NE
68369	17634 ChEBI	D-glucose	-	fermentation	from API 20NE
68369	16899 ChEBI	D-mannitol	-	assimilation	from API 20NE
68369	16024 ChEBI	D-mannose	+	assimilation	from API 20NE
68369	27689 ChEBI	decanoate	-	assimilation	from API 20NE
68369	4853 ChEBI	esculin	+	hydrolysis	from API 20NE
68369	5291 ChEBI	gelatin	-	hydrolysis	from API 20NE
68369	24265 ChEBI	gluconate	+	assimilation	from API 20NE
68369	30849 ChEBI	L-arabinose	+	assimilation	from API 20NE
68369	25115 ChEBI	malate	+	assimilation	from API 20NE
68369	17306 ChEBI	maltose	+	assimilation	from API 20NE
68369	59640 ChEBI	N-acetylglucosamine	+	assimilation	from API 20NE
117175	17632 ChEBI	nitrate	+	reduction
68369	17632 ChEBI	nitrate	+	reduction	from API 20NE
117175	16301 ChEBI	nitrite	-	reduction
68369	27897 ChEBI	tryptophan	-	energy source	from API 20NE
68369	16199 ChEBI	urea	-	hydrolysis	from API 20NE

Metabolite production

@ref	Chebi-ID	Metabolite	Production
68369	35581 ChEBI	indole		from API 20NE
117175	35581 ChEBI	indole

Metabolite tests

@ref	Chebi-ID	Metabolite	Indole test
68369	35581 ChEBI	indole	-	from API 20NE

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	+	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
68369	arginine dihydrolase	-	3.5.3.6	from API 20NE
68382	beta-galactosidase	+	3.2.1.23	from API zym
68382	beta-glucosidase	+	3.2.1.21	from API zym
68369	beta-glucosidase	+	3.2.1.21	from API 20NE
68382	beta-glucuronidase	+	3.2.1.31	from API zym
117175	catalase	+	1.11.1.6
68382	cystine arylamidase	+	3.4.11.3	from API zym
68369	cytochrome oxidase	+	1.9.3.1	from API 20NE
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	+		from API zym
68369	gelatinase	-		from API 20NE
68382	leucine arylamidase	+	3.4.11.1	from API zym
68382	lipase (C 14)	-		from API zym
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
117175	oxidase	+
68382	trypsin	-	3.4.21.4	from API zym
117175	urease	-	3.5.1.5
68369	urease	-	3.5.1.5	from API 20NE
68382	valine arylamidase	+		from API zym

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
117175	-	+	+	+	-	+	+	+	-	-	+	+	-	+	+	+	+	-	-	-

API 20NE

@ref	Reduction of nitratesNO3	TRP	GLU_ Ferm	ADH (Arg)	URE	ESC	GEL	PNPG	GLU_ Assim	ARA	MNE	MAN	NAG	MAL	GNT	CAP	ADI	MLT	CIT	PAC	OX
9195	+	-	-	-	-	+	-	+	+	+	+	-	+	+	+	-	-	+	-	-	+

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Aquatic	-
#Engineered	#Industrial	#Engineered product
#Engineered	#Treatment	#Sterilized (Desinfected)

Isolation

@ref	Sample type
9195	distilled water
67770	Distilled water
117175	Environment, Distilled water

Taxonmaps

69479

Global distribution of 16S sequence D16147 (>99% sequence identity) for Novosphingobium capsulatum from Microbeatlas

Aquatic Samples	532
Soil Samples	144
Animal Samples	416
Plant Samples	71
Total Samples	1163

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
9195	1	Risk group (German classification) According to TRBA 466
117175	1	Risk group (French classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
67770	ASM159837v1 assembly for Novosphingobium capsulatum NBRC 12533	contig	GCA_001598375	1219042.3	2681812976	1219042	63.77

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
20218	Novosphingobium capsulatum gene for 16S rRNA, partial sequence	D16147	1443	13688
20218	Sphingomonas capsulata 16S ribosomal RNA, partial sequence	D38431	156	13688
20218	Novosphingobium capsulatum gene for 16S ribosomal RNA	D84532	1387	13688
20218	16S rRNA [Sphingomonas capsulata, LMG 2830T, Genomic, 268 nt]	S56775	268	13688
20218	Novosphingobium capsulatum gene for 16S rRNA, partial sequence, strain: NBRC 12533	AB680290	1410	13688

GC content

@ref	GC-content (mol%)	Method
9195	64.3
67770	64.3	thermal denaturation, midpoint method (Tm)
67770	63.1	high performance liquid chromatography (HPLC)

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM159837v1 assembly for Novosphingobium capsulatum NBRC 12533
BV-BRC: 1219042.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	aerobe	94.11	no
125439	motility	BacteriaNetⓘ	yes	61.12	no
125439	gram_stain	BacteriaNetⓘ	negative	98.28	no
125439	spore_formation	BacteriaNetⓘ	no	99.43	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Novosphingobium capsulatum NBRC 12533
PATRIC: 1219042.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	94.75	no
125438	anaerobic	anaerobicⓘ	no	96.80	yes
125438	spore-forming	spore-formingⓘ	no	89.86	no
125438	aerobic	aerobicⓘ	yes	88.92	yes
125438	thermophilic	thermophileⓘ	no	97.73	yes
125438	flagellated	motile2+ⓘ	yes	70.30	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Characterization of vB_StuS_MMDA13, a Newly Discovered Bacteriophage Infecting the Agar-Degrading Species Sphingomonas turrisvirgatae.	Marmo P, Thaller MC, Di Lallo G, Henrici De Angelis L, Poerio N, De Santis F, Fraziano M, Migliore L, D'Andrea MM.	Viruses	10.3390/v12080894	2020
Enzymology	Design and evaluation of 16S rRNA sequence based oligonucleotide probes for the detection and quantification of Comamonas testosteroni in mixed microbial communities.	Bathe S, Hausner M.	BMC Microbiol	10.1186/1471-2180-6-54	2006
	Resource availability and competition shape the evolution of survival and growth ability in a bacterial community.	Pekkonen M, Ketola T, Laakso JT.	PLoS One	10.1371/journal.pone.0076471	2013
	Temporal changes in species interactions in simple aquatic bacterial communities.	Pekkonen M, Laakso JT.	BMC Ecol	10.1186/1472-6785-12-18	2012
	The relative importance of competition and predation in environment characterized by resource pulses--an experimental test with a microbial community.	Hiltunen T, Laakso J.	BMC Ecol	10.1186/1472-6785-13-29	2013
	Exacerbation of invasive Candida albicans infection by commensal bacteria or a glycolipid through IFN-gamma produced in part by iNKT cells.	Tarumoto N, Kinjo Y, Kitano N, Sasai D, Ueno K, Okawara A, Izawa Y, Shinozaki M, Watarai H, Taniguchi M, Takeyama H, Maesaki S, Shibuya K, Miyazaki Y.	J Infect Dis	10.1093/infdis/jit534	2014
	Identification and Characterization of Genes Required for 5-Hydroxyuridine Synthesis in Bacillus subtilis and Escherichia coli tRNA.	Lauhon CT.	J Bacteriol	10.1128/jb.00433-19	2019
Genetics	A new experimental approach for studying bacterial genomic island evolution identifies island genes with bacterial host-specific expression patterns.	Wilson JW, Nickerson CA.	BMC Evol Biol	10.1186/1471-2148-6-2	2006
Metabolism	Implicating the glutathione-gated potassium efflux system as a cause of electrophile-induced activated sludge deflocculation.	Bott CB, Love NG.	Appl Environ Microbiol	10.1128/aem.70.9.5569-5578.2004	2004
Metabolism	Influence of inorganic nitrogen management regime on the diversity of nitrite-oxidizing bacteria in agricultural grassland soils.	Freitag TE, Chang L, Clegg CD, Prosser JI.	Appl Environ Microbiol	10.1128/aem.71.12.8323-8334.2005	2005
Metabolism	Carotenoid Nostoxanthin Production by Sphingomonas sp. SG73 Isolated from Deep Sea Sediment.	Kikukawa H, Okaya T, Maoka T, Miyazaki M, Murofushi K, Kato T, Hirono-Hara Y, Katsumata M, Miyahara S, Hara KY.	Mar Drugs	10.3390/md19050274	2021
	DNA regions responsible for maintenance of Shingobium plasmid pYAN-2.	Hayashi H, Kurusu Y.	Microbes Environ	10.1264/jsme2.me13135	2014
	Synthetic Protein-Assisted Co-Assembly of Zeolitic Imidazolate Framework-8 and Novosphingobium capsulatum for Enhanced Saline-Alkali Resistance of Wheat.	Zhao Z, Liu R, Yu J, Liu Y, Li M, Yu Q.	Molecules	10.3390/molecules30183669	2025
	The antimicrobial activity of ETD151 defensin is dictated by the presence of glycosphingolipids in the targeted organisms.	Kharrat O, Yamaryo-Botte Y, Nasreddine R, Voisin S, Aumer T, Cammue BPA, Madinier JB, Knobloch T, Thevissen K, Nehme R, Aucagne V, Botte C, Bulet P, Landon C.	Proc Natl Acad Sci U S A	10.1073/pnas.2415524122	2025
Phylogeny	Investigation of milk microbiota of healthy and mastitic Sahiwal cattle.	Salman MM, Nawaz M, Yaqub T, Mushtaq MH.	BMC Microbiol	10.1186/s12866-023-03051-0	2023
	Elucidation of a bacterial pathway for catabolism of the beta-beta-linked dilignol pinoresinol.	Allemann MN, Lu F, Presley GN, Valentino HR, Bedgar DL, Costa MA, Moinuddin SGA, Azubuike CC, Vasileva DP, Klingeman DM, Hochanadel LH, Fisch AR, Sanders BC, Eltis LD, Giannone RJ, Davin LB, Lewis NG, Ralph J, Elkins JG, Michener JK.	mBio	10.1128/mbio.02010-25	2025
	Genetic tools for engineering Zymomonas mobilis, Cereibacter sphaeroides and Novosphingobium aromaticivorans to improve production of bioenergy compounds.	Mishra S, Kumar V, Misra J, K P A, Sah B, Lal PB.	Microb Cell Fact	10.1186/s12934-025-02845-3	2025
Phylogeny	A rapid and simple method for identifying bacterial polar lipid components in wet biomass.	Nguyen TM, Kim J.	J Microbiol	10.1007/s12275-017-7092-1	2017
Phylogeny	Microbiota analysis of perimenopausal women experiencing recurrent vaginitis in conjunction with urinary tract infection.	Bi Y, Wang Y, Li W, Chen Y, Qin J, Zheng H.	BMC Microbiol	10.1186/s12866-024-03709-3	2025
	Application of Next-Generation Sequencing for the Determination of the Bacterial Community in the Gut Contents of Brackish Copepod Species (Acartia hudsonica, Sinocalanus tenellus, and Pseudodiaptomus inopinus).	Chae YJ, Oh HJ, Chang KH, Kwak IS, Jo H.	Animals (Basel)	10.3390/ani11020542	2021
Genetics	Assessing peri-implant bacterial community structure: the effect of microbiome sample collection method.	Anitua E, Murias-Freijo A, Tierno R, Tejero R, Alkhraisat MH.	BMC Oral Health	10.1186/s12903-024-04675-y	2024
	alpha/beta Hydrolases: Toward Unraveling Entangled Classification.	Ozhelvaci F, Steczkiewicz K.	Proteins	10.1002/prot.26776	2025
	Hydrosols of orange blossom (Citrus aurantium), and rose flower (Rosa damascena and Rosa centifolia) support the growth of a heterogeneous spoilage microbiota.	Labadie C, Ginies C, Guinebretiere MH, Renard CMGC, Cerutti C, Carlin F.	Food Res Int	10.1016/j.foodres.2015.07.014	2015
Metabolism	Characterization of polyhydroxyalkanoates (PHAs) biosynthesis by isolated Novosphingobium sp. THA_AIK7 using crude glycerol.	Teeka J, Imai T, Reungsang A, Cheng X, Yuliani E, Thiantanankul J, Poomipuk N, Yamaguchi J, Jeenanong A, Higuchi T, Yamamoto K, Sekine M.	J Ind Microbiol Biotechnol	10.1007/s10295-012-1084-2	2012
	Characterization of two compatible small plasmids from Sphingobium yanoikuyae.	Ochou M, Saito M, Kurusu Y.	Biosci Biotechnol Biochem	10.1271/bbb.70813	2008
Phylogeny	Subgingival Microbiota and Cytokines Profile Changes in Patients with Periodontitis: A Pilot Study Comparing Healthy and Diseased Sites in the Same Oral Cavities.	Esparbes P, Legrand A, Bandiaky ON, Cheraud-Carpentier M, Martin H, Montassier E, Soueidan A.	Microorganisms	10.3390/microorganisms9112364	2021
	Adaptation to fluctuations in temperature by nine species of bacteria.	Saarinen K, Laakso J, Lindstrom L, Ketola T.	Ecol Evol	10.1002/ece3.3823	2018
	Facilitation as Attenuating of Environmental Stress among Structured Microbial Populations.	Martins SC, Santaella ST, Martins CM, Martins RP.	ScientificWorldJournal	10.1155/2016/5713939	2016
	Effects of Malic Acid and Sucrose on the Fermentation Parameters, CNCPS Nitrogen Fractions, and Bacterial Community of Moringa oleifera Leaves Silage.	Tian H, Wang Y, Liu Z, Hu Z, Guo Y, Deng M, Liu G, Sun B.	Microorganisms	10.3390/microorganisms9102102	2021
Phylogeny	Proposal of the genus Sphingomonas sensu stricto and three new genera, Sphingobium, Novosphingobium and Sphingopyxis, on the basis of phylogenetic and chemotaxonomic analyses.	Takeuchi M, Hamana K, Hiraishi A.	Int J Syst Evol Microbiol	10.1099/00207713-51-4-1405	2001
	Isolation and Characterisation of Endophytic Nitrogen Fixing Bacteria in Sugarcane.	Muangthong A, Youpensuk S, Rerkasem B.	Trop Life Sci Res		2015
	Skim milk enhances the preservation of thawed -80 degrees C bacterial stocks.	Cody WL, Wilson JW, Hendrixson DR, McIver KS, Hagman KE, Ott CM, Nickerson CA, Schurr MJ.	J Microbiol Methods	10.1016/j.mimet.2008.05.006	2008
	Three-Dimensional Molecular Modeling of a Diverse Range of SC Clan Serine Proteases.	Laskar A, Chatterjee A, Chatterjee S, Rodger EJ.	Mol Biol Int	10.1155/2012/580965	2012
Biotechnology	Soleris®Enterobacteriaceae for the Detection of Enterobacteriaceae in Select Foods: AOAC Performance Tested MethodSM 121901.	Alles S, Roman B, Betts G, Jordan S, Everis L, Montei C, Biswas P, Mozola M, Donofrio R.	J AOAC Int	10.1093/jaoacint/qsaa001	2020
	Proposal for a method to estimate nutrient shock effects in bacteria.	Azevedo NF, Braganca SM, Simoes LC, Cerqueira L, Almeida C, Almeida C, Keevil CW, Vieira MJ.	BMC Res Notes	10.1186/1756-0500-5-422	2012
	Biocontrol of Phytophthora Blight and Anthracnose in Pepper by Sequentially Selected Antagonistic Rhizobacteria against Phytophthora capsici.	Sang MK, Shrestha A, Kim DY, Park K, Pak CH, Kim KD.	Plant Pathol J	10.5423/ppj.oa.07.2012.0104	2013
Metabolism	Archaeal production of polyhydroxyalkanoate (PHA) co- and terpolyesters from biodiesel industry-derived by-products.	Hermann-Krauss C, Koller M, Muhr A, Fasl H, Stelzer F, Braunegg G.	Archaea	10.1155/2013/129268	2013
Pathogenicity	Molecular analysis of arsenate-reducing bacteria within Cambodian sediments following amendment with acetate.	Lear G, Song B, Gault AG, Polya DA, Lloyd JR.	Appl Environ Microbiol	10.1128/aem.01654-06	2007
Enzymology	Dipeptidyl aminopeptidase IV from Stenotrophomonas maltophilia exhibits activity against a substrate containing a 4-hydroxyproline residue.	Nakajima Y, Ito K, Toshima T, Egawa T, Zheng H, Oyama H, Wu YF, Takahashi E, Kyono K, Yoshimoto T.	J Bacteriol	10.1128/jb.02010-07	2008
Genetics	Analysis of 1,000+ Type-Strain Genomes Substantially Improves Taxonomic Classification of Alphaproteobacteria.	Hordt A, Lopez MG, Meier-Kolthoff JP, Schleuning M, Weinhold LM, Tindall BJ, Gronow S, Kyrpides NC, Woyke T, Goker M.	Front Microbiol	10.3389/fmicb.2020.00468	2020
Phylogeny	Novosphingobium pokkalii sp nov, a novel rhizosphere-associated bacterium with plant beneficial properties isolated from saline-tolerant pokkali rice.	Krishnan R, Menon RR, Likhitha, Busse HJ, Tanaka N, Krishnamurthi S, Rameshkumar N	Res Microbiol	10.1016/j.resmic.2016.09.001	2016
Metabolism	Production and rheological characterization of biopolymer of Sphingomonas capsulata ATCC 14666 using conventional and industrial media.	Berwanger AL, Domingues NM, Vanzo LT, Di Luccio M, Treichel H, Padilha FF, Scamparini AR	Appl Biochem Biotechnol		2006
Enzymology	Prolyl endopeptidase from Sphingomonas capsulata: isolation and characterization of the enzyme and nucleotide sequence of the gene.	Kabashima T, Fujii M, Meng Y, Ito K, Yoshimoto T	Arch Biochem Biophys	10.1006/abbi.1998.0836	1998
Phylogeny	Aromatic-degrading Sphingomonas isolates from the deep subsurface.	Fredrickson JK, Balkwill DL, Drake GR, Romine MF, Ringelberg DB, White DC	Appl Environ Microbiol	10.1128/aem.61.5.1917-1922.1995	1995
	Agromyces chromiiresistens sp. nov., Novosphingobium album sp. nov., Sphingobium arseniciresistens sp. nov., Sphingomonas pollutisoli sp. nov., and Salinibacterium metalliresistens sp. nov.: five new members of Microbacteriaceae and Sphingomonadaceae from polluted soil.	Liu ZS, Wang KH, Cai M, Yang ML, Wang XK, Ma HL, Yuan YH, Wu LH, Li DF, Liu SJ.	Front Microbiol	10.3389/fmicb.2023.1289110	2023
Phylogeny	Description of Novosphingobiumflavum sp. nov., isolated from soil.	Nguyen TM, Myung SW, Jang H, Kim J	Int J Syst Evol Microbiol	10.1099/ijsem.0.001242	2016
Phylogeny	Novosphingobium marinum sp. nov., isolated from seawater.	Huo YY, You H, Li ZY, Wang CS, Xu XW	Int J Syst Evol Microbiol	10.1099/ijs.0.070433-0	2014
Phylogeny	Proposal of Novosphingobium rhizosphaerae sp. nov., isolated from the rhizosphere.	Kampfer P, Martin K, McInroy JA, Glaeser SP	Int J Syst Evol Microbiol	10.1099/ijs.0.070375-0	2014

References

#9195	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 30196
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#38753	; Curators of the CIP;
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#68369	Automatically annotated from API 20NE .
#68382	Automatically annotated from API zym .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#117175	Collection of Institut Pasteur ; Curators of the CIP; CIP 82.103
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Novosphingobium capsulatum (DSM 30196, ATCC 14666, GIFU 11526)

Name and taxonomic classification

Morphology

Cell morphology

Multimedia

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Observation

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API 20NE

Isolation, sampling and environmental information

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Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_001598375

16S sequences

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Genome-based predictions

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Literature

Literature

References

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