Mucilaginibacter paludis (DSM 18603, ATCC BAA-1394, VKM B-2446)

Name: Mucilaginibacter paludis (DSM 18603, ATCC BAA-1394, VKM B-2446)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 14134

Type strain

Strain Designation TPT56

Culture col. no. DSM 18603 ATCC BAA-1394 VKM B-2446 TPT56

NCBI tax ID(s) 714943 423351

Special Collections DSMZ Literature strains

Links

Mucilaginibacter paludis TPT56 is a facultative aerobe, heterotroph, mesophilic prokaryote that forms circular colonies and was isolated from sample collected from 10–20 cm below the surface of the Sphagnum peat bog Bakchar.

Gram-negative rod-shaped colony-forming facultative aerobe heterotroph mesophilic genome sequence 16S sequence

Name and taxonomic classification

SI-ID 402696

ATCC BAA-1394,VKM B-2446,DSM 18603

@ref 20215

Last LPSN update 2025-12-16 09:50:16

Domain Pseudomonadati

Phylum Bacteroidota

Class Sphingobacteriia

Order Sphingobacteriales

Family Sphingobacteriaceae

Genus Mucilaginibacter

Species Mucilaginibacter paludis

Full scientific name Mucilaginibacter paludis Pankratov et al. 2007

Morphology

Cell morphology

@ref	Gram stain	Cell length	Cell width	Cell shape	Confidence
32192	negative	20.75 µm	0.65 µm	rod-shaped
28434	negative	6-15 µm	0.5-0.8 µm	rod-shaped
125438	negative				92.227
125439	negative				99.9

Colony morphology

@ref	Colony size	Colony color	Colony shape	Medium used
28434	3-10 mm	light pink to reddish	circular	1:10 R2A agar

Pigmentation

@ref	Production	Name
32192
28434		flexirubin type pigments

Multimedia

@ref:	66793
multimedia content:	EM_DSM_18603_1.jpg
multimedia.multimedia content:	EM_DSM_18603_1.jpg
caption:	electron microscopic image
intellectual property rights:	© HZI/Manfred Rohde
manual_annotation:	1

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
7617	R2A MEDIUM (DSMZ Medium 830)		Medium recipe at MediaDive	Name: R2A MEDIUM (DSMZ Medium 830; with strain-specific modifications) Composition: Agar 15.0 g/l Casamino acids 0.5 g/l Starch 0.5 g/l Glucose 0.5 g/l Proteose peptone 0.5 g/l Yeast extract 0.5 g/l K2HPO4 0.3 g/l Na-pyruvate 0.3 g/l MgSO4 x 7 H2O 0.05 g/l Distilled water
28434	1:10 R2A agar

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
7617	positive	growth	25	mesophilic
28434	positive	optimum	20-25
32192	positive	growth	02-33
32192	positive	optimum	17.5	psychrophilic

Culture pH

@ref	Ability	Type	PH
32192	positive	optimum	6.2
28434	positive	optimum	6-6.5
32192	positive	growth	4.2-8.2
28434	positive	growth	4.2-8.2

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance
32192	facultative aerobe
28434	facultative aerobe

Nutrition type

28434

Typeheterotroph

Spore formation

@ref	Spore formation	Confidence
32192
28434
125439		99.6

Halophily

@ref	Salt	Growth	Tested relation	Concentration
32192	NaCl	positive	growth	0-1 %
32192	NaCl	positive	optimum	0.5 %
28434	NaCl	positive	growth	0-1 %(w/v)

Observation

32192

Observationaggregates in chains

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
28434	30089 ChEBI	acetate	-	assimilation
28434	58187 ChEBI	alginate	-	hydrolysis
28434	22605 ChEBI	arabinitol	-	assimilation
28434	18305 ChEBI	arbutin	-	assimilation
28434	17968 ChEBI	butyrate	-	assimilation
28434	85146 ChEBI	carboxymethylcellulose	-	hydrolysis
32192	17057 ChEBI	cellobiose	+	carbon source
28434	17057 ChEBI	cellobiose	+	builds acid from
28434	17057 ChEBI	cellobiose	+	assimilation
28434	62968 ChEBI	cellulose	-	hydrolysis
28434	17029 ChEBI	chitin	-	hydrolysis
28434	37397 ChEBI	chondroitin sulfate	+	hydrolysis
28434	16947 ChEBI	citrate	-	assimilation
28434	17108 ChEBI	D-arabinose	-	assimilation
28434	15824 ChEBI	D-fructose	+	assimilation
28434	12931 ChEBI	D-galactonate	+	assimilation
28434	12936 ChEBI	D-galactose	+	assimilation
28434	17634 ChEBI	D-glucose	+	assimilation
28434	16024 ChEBI	D-mannose	+	assimilation
28434	63150 ChEBI	D-rhamnose	+	assimilation
28434	65327 ChEBI	D-xylose	+	assimilation
28434	27689 ChEBI	decanoate	-	assimilation
28434	4853 ChEBI	esculin	-	hydrolysis
32192	28757 ChEBI	fructose	+	carbon source
28434	28757 ChEBI	fructose	+	builds acid from
28434	5181 ChEBI	fucoidan	-	hydrolysis
28434	29806 ChEBI	fumarate	-	assimilation
28434	16813 ChEBI	galactitol	-	assimilation
32192	28260 ChEBI	galactose	+	carbon source
28434	28260 ChEBI	galactose	+	builds acid from
28434	85248 ChEBI	gellan gum	+	hydrolysis
32192	17234 ChEBI	glucose	+	carbon source
28434	17234 ChEBI	glucose	+	fermentation
28434	17234 ChEBI	glucose	+	builds acid from
28434	28304 ChEBI	heparin	-	hydrolysis
28434	15443 ChEBI	inulin	-	assimilation
32192	17716 ChEBI	lactose	+	carbon source
28434	17716 ChEBI	lactose	+	assimilation
28434	17716 ChEBI	lactose	+	builds acid from
28434	6364 ChEBI	laminarin	+	hydrolysis
28434	6364 ChEBI	laminarin	+	builds acid from
28434	79285 ChEBI	leucrose	+	assimilation
28434	6452 ChEBI	lichenin	-	hydrolysis
28434	25115 ChEBI	malate	-	assimilation
32192	17306 ChEBI	maltose	+	carbon source
28434	17306 ChEBI	maltose	+	assimilation
28434	17306 ChEBI	maltose	+	builds acid from
28434	29864 ChEBI	mannitol	-	assimilation
32192	37684 ChEBI	mannose	+	carbon source
28434	37684 ChEBI	mannose	+	builds acid from
28434	6731 ChEBI	melezitose	-	assimilation
28434	28053 ChEBI	melibiose	-	assimilation
32192	17268 ChEBI	myo-inositol	+	carbon source
28434	17268 ChEBI	myo-inositol	+	assimilation
32192	506227 ChEBI	N-acetylglucosamine	+	carbon source
28434	506227 ChEBI	N-acetylglucosamine	+	assimilation
28434	17272 ChEBI	propionate	-	assimilation
28434	27941 ChEBI	pullulan	+	hydrolysis
28434	15361 ChEBI	pyruvate	-	assimilation
28434	16634 ChEBI	raffinose	-	assimilation
32192	26546 ChEBI	rhamnose	+	carbon source
28434	26546 ChEBI	rhamnose	+	builds acid from
28434	15963 ChEBI	ribitol	-	assimilation
28434	17814 ChEBI	salicin	-	assimilation
28434	30911 ChEBI	sorbitol	-	assimilation
28434	9215 ChEBI	spectinomycin	+	hydrolysis
28434	28017 ChEBI	starch	+	hydrolysis
28434	30031 ChEBI	succinate	-	assimilation
32192	17992 ChEBI	sucrose	+	carbon source
28434	17992 ChEBI	sucrose	+	assimilation
28434	17992 ChEBI	sucrose	+	fermentation
28434	17992 ChEBI	sucrose	+	builds acid from
32192	27082 ChEBI	trehalose	+	carbon source
28434	27082 ChEBI	trehalose	+	assimilation
28434	31011 ChEBI	valerate	-	assimilation
28434	37166 ChEBI	xylan	+	hydrolysis
28434	37166 ChEBI	xylan	+	builds acid from
32192	18222 ChEBI	xylose	+	carbon source
28434	18222 ChEBI	xylose	+	builds acid from

Antibiotic resistance

@ref	ChEBI	Metabolite	Resistance conc.	Sensitivity conc.
28434	28971	ampicillin	10 µg
28434	17698	chloramphenicol		30 µg
28434	17833	gentamicin	10 µg
28434	6104	kanamycin	30 µg
28434	6472	lincomycin	10 µg
28434	7507	neomycin	10 µg
28434	28368	novobiocin	10 µg
28434	17076	streptomycin		10 µg

Enzymes

@ref	Value	Activity	Ec
32192	catalase	+	1.11.1.6
32192	cytochrome oxidase	+	1.9.3.1

Pathway annotation

Computationally determined by

@ref	pathway	enzyme coverage	annotated reactions
66794	anapleurotic synthesis of oxalacetate	100	1 of 1
66794	palmitate biosynthesis	100	22 of 22
66794	ppGpp biosynthesis	100	4 of 4
66794	methylglyoxal degradation	100	5 of 5
66794	valine metabolism	100	9 of 9
66794	starch degradation	100	10 of 10
66794	biotin biosynthesis	100	4 of 4
66794	L-lactaldehyde degradation	100	3 of 3
66794	adipate degradation	100	2 of 2
66794	acetate fermentation	100	4 of 4
66794	CMP-KDO biosynthesis	100	4 of 4
66794	1,4-dihydroxy-6-naphthoate biosynthesis	100	6 of 6
66794	ceramide biosynthesis	100	1 of 1
66794	suberin monomers biosynthesis	100	2 of 2
66794	UDP-GlcNAc biosynthesis	100	3 of 3
66794	CDP-diacylglycerol biosynthesis	100	2 of 2
66794	sulfopterin metabolism	100	4 of 4
66794	coenzyme A metabolism	100	4 of 4
66794	formaldehyde oxidation	100	3 of 3
66794	allantoin degradation	100	9 of 9
66794	glycogen metabolism	100	5 of 5
66794	folate polyglutamylation	100	1 of 1
66794	cellulose degradation	100	5 of 5
66794	cis-vaccenate biosynthesis	100	2 of 2
66794	gluconeogenesis	100	8 of 8
66794	NAD metabolism	94.44	17 of 18
66794	tetrahydrofolate metabolism	92.86	13 of 14
66794	photosynthesis	92.86	13 of 14
66794	threonine metabolism	90	9 of 10
66794	Entner Doudoroff pathway	90	9 of 10
66794	molybdenum cofactor biosynthesis	88.89	8 of 9
66794	chorismate metabolism	88.89	8 of 9
66794	lipid A biosynthesis	88.89	8 of 9
66794	C4 and CAM-carbon fixation	87.5	7 of 8
66794	heme metabolism	85.71	12 of 14
66794	ubiquinone biosynthesis	85.71	6 of 7
66794	reductive acetyl coenzyme A pathway	85.71	6 of 7
66794	vitamin B1 metabolism	84.62	11 of 13
66794	phenylalanine metabolism	84.62	11 of 13
66794	alanine metabolism	82.76	24 of 29
66794	pyrimidine metabolism	82.22	37 of 45
66794	proline metabolism	81.82	9 of 11
66794	pentose phosphate pathway	81.82	9 of 11
66794	peptidoglycan biosynthesis	80	12 of 15
66794	metabolism of amino sugars and derivatives	80	4 of 5
66794	flavin biosynthesis	80	12 of 15
66794	purine metabolism	79.79	75 of 94
66794	glutathione metabolism	78.57	11 of 14
66794	glutamate and glutamine metabolism	78.57	22 of 28
66794	CO2 fixation in Crenarchaeota	77.78	7 of 9
66794	aspartate and asparagine metabolism	77.78	7 of 9
66794	d-mannose degradation	77.78	7 of 9
66794	serine metabolism	77.78	7 of 9
66794	degradation of hexoses	77.78	14 of 18
66794	leucine metabolism	76.92	10 of 13
66794	degradation of sugar alcohols	75	12 of 16
66794	dTDPLrhamnose biosynthesis	75	6 of 8
66794	glycogen biosynthesis	75	3 of 4
66794	isoleucine metabolism	75	6 of 8
66794	methionine metabolism	73.08	19 of 26
66794	isoprenoid biosynthesis	73.08	19 of 26
66794	cardiolipin biosynthesis	71.43	5 of 7
66794	degradation of pentoses	71.43	20 of 28
66794	glycolysis	70.59	12 of 17
66794	degradation of sugar acids	68	17 of 25
66794	cyanate degradation	66.67	2 of 3
66794	cysteine metabolism	66.67	12 of 18
66794	acetoin degradation	66.67	2 of 3
66794	octane oxidation	66.67	2 of 3
66794	acetyl CoA biosynthesis	66.67	2 of 3
66794	lipid metabolism	64.52	20 of 31
66794	citric acid cycle	64.29	9 of 14
66794	tyrosine metabolism	64.29	9 of 14
66794	vitamin B6 metabolism	63.64	7 of 11
66794	d-xylose degradation	63.64	7 of 11
66794	metabolism of disaccharids	63.64	7 of 11
66794	tryptophan metabolism	63.16	24 of 38
66794	ketogluconate metabolism	62.5	5 of 8
66794	6-hydroxymethyl-dihydropterin diphosphate biosynthesis	62.5	5 of 8
66794	histidine metabolism	62.07	18 of 29
66794	sulfate reduction	61.54	8 of 13
66794	urea cycle	61.54	8 of 13
66794	non-pathway related	60.53	23 of 38
66794	gallate degradation	60	3 of 5
66794	phenylacetate degradation (aerobic)	60	3 of 5
66794	glycine betaine biosynthesis	60	3 of 5
66794	propionate fermentation	60	6 of 10
66794	coenzyme M biosynthesis	60	6 of 10
66794	arachidonate biosynthesis	60	3 of 5
66794	degradation of aromatic, nitrogen containing compounds	58.33	7 of 12
66794	propanol degradation	57.14	4 of 7
66794	lysine metabolism	57.14	24 of 42
66794	4-hydroxymandelate degradation	55.56	5 of 9
66794	arginine metabolism	54.17	13 of 24
66794	phenylpropanoid biosynthesis	53.85	7 of 13
66794	oxidative phosphorylation	51.65	47 of 91
66794	cyclohexanol degradation	50	2 of 4
66794	selenocysteine biosynthesis	50	3 of 6
66794	glycine metabolism	50	5 of 10
66794	lactate fermentation	50	2 of 4
66794	phenylmercury acetate degradation	50	1 of 2
66794	butanoate fermentation	50	2 of 4
66794	quinate degradation	50	1 of 2
66794	ethanol fermentation	50	1 of 2
66794	3-phenylpropionate degradation	46.67	7 of 15
66794	phosphatidylethanolamine bioynthesis	46.15	6 of 13
66794	ascorbate metabolism	45.45	10 of 22
66794	carotenoid biosynthesis	45.45	10 of 22
66794	phenol degradation	45	9 of 20
66794	nitrate assimilation	44.44	4 of 9
66794	arachidonic acid metabolism	44.44	8 of 18
66794	androgen and estrogen metabolism	43.75	7 of 16
66794	hydrogen production	40	2 of 5
66794	lipoate biosynthesis	40	2 of 5
66794	4-hydroxyphenylacetate degradation	40	4 of 10
66794	elloramycin biosynthesis	40	2 of 5
66794	3-chlorocatechol degradation	40	2 of 5
66794	O-antigen biosynthesis	40	2 of 5
66794	ethylmalonyl-CoA pathway	40	2 of 5
66794	IAA biosynthesis	33.33	1 of 3
66794	glycolate and glyoxylate degradation	33.33	2 of 6
66794	sphingosine metabolism	33.33	2 of 6
66794	chlorophyll metabolism	33.33	6 of 18
66794	enterobactin biosynthesis	33.33	1 of 3
66794	sulfoquinovose degradation	33.33	1 of 3
66794	pantothenate biosynthesis	33.33	2 of 6
66794	(5R)-carbapenem carboxylate biosynthesis	33.33	1 of 3
66794	myo-inositol biosynthesis	30	3 of 10
66794	bile acid biosynthesis, neutral pathway	29.41	5 of 17
66794	mevalonate metabolism	28.57	2 of 7
66794	dolichyl-diphosphooligosaccharide biosynthesis	27.27	3 of 11
66794	cholesterol biosynthesis	27.27	3 of 11
66794	polyamine pathway	26.09	6 of 23
66794	toluene degradation	25	1 of 4
66794	methanogenesis from CO2	25	3 of 12
66794	carnitine metabolism	25	2 of 8
66794	daunorubicin biosynthesis	22.22	2 of 9

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Terrestrial	#Wetland (Swamp)
#Host	#Plants	#Moss

Isolation

@ref	Sample type	Host species	Geographic location	Country	Country ISO 3 Code	Continent	Latitude	Longitude
7617	sample collected from 10–20 cm below the surface of the Sphagnum peat bog Bakchar	Sphagnum	western Siberia, Tomsk region (56° 51' N 82° 50' E)	Russia	RUS	Asia	56.85	82.8333 56.85/82.8333
28434	sphagnum peat bog Bakchar		western siberia in the Tomsk Region	Russia	RUS	Asia

Taxonmaps

69479

Global distribution of 16S sequence AM490402 (>99% sequence identity) for Mucilaginibacter paludis subclade from Microbeatlas

Aquatic Samples	75
Soil Samples	322
Animal Samples	130
Plant Samples	55
Total Samples	582

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
7617	1	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM16619v3 assembly for Mucilaginibacter paludis DSM 18603	chromosome	GCA_000166195	714943.3	2506520020	714943	86.89

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
7617	Mucilaginibacter paludis partial 16S rRNA gene, strain TPT56	AM490402	1406		714943

GC content

@ref	GC-content (mol%)	Method
7617	46.1
28434	46.1	thermal denaturation, midpoint method (Tm)
7617	42.9	sequence analysis

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Mucilaginibacter paludis DSM 18603
PATRIC: 714943.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	no	99.60	no
125439	motility	BacteriaNetⓘ	no	74.00	no
125439	gram_stain	BacteriaNetⓘ	negative	99.90	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	89.90	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Mucilaginibacter paludis DSM 18603 DSM 18603
NCBI: GCA_000166195.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	92.23	no
125438	anaerobic	anaerobicⓘ	no	93.97	no
125438	aerobic	aerobicⓘ	yes	66.17	yes
125438	spore-forming	spore-formingⓘ	no	83.80	yes
125438	thermophilic	thermophileⓘ	no	96.49	no
125438	flagellated	motile2+ⓘ	no	88.50	yes

Literature

Topic	Title	Authors	Journal	DOI	Year
Enzymology	The Pif1 family in prokaryotes: what are our helicases doing in your bacteria?	Bochman ML, Judge CP, Zakian VA.	Mol Biol Cell	10.1091/mbc.e11-01-0045	2011
Metabolism	Two new xylanases with different substrate specificities from the human gut bacterium Bacteroides intestinalis DSM 17393.	Hong PY, Iakiviak M, Dodd D, Zhang M, Mackie RI, Cann I.	Appl Environ Microbiol	10.1128/aem.03176-13	2014
	A Mesophilic Argonaute from Cohnella algarum Mediates Programmable DNA/RNA Cleavage with Distinctive Guide Specificity.	Peng Y, Pan W, Wang Y, Liu Y, Ma L.	Biomolecules	10.3390/biom15101459	2025
	A programmable pAgo nuclease with RNA target preference from the psychrotolerant bacterium Mucilaginibacter paludis.	Li W, Liu Y, He R, Wang L, Wang Y, Zeng W, Zhang Z, Wang F, Ma L.	Nucleic Acids Res	10.1093/nar/gkac315	2022
	Genome analysis reveals diverse novel psychrotolerant Mucilaginibacter species in Arctic tundra soils.	Kumar A, Mannisto MK, Patsi M, Kerkhof LJ, Haggblom MM.	ISME Commun	10.1093/ismeco/ycaf071	2025
	Discovery of highly active kynureninases for cancer immunotherapy through protein language model.	Eom H, Park S, Cho KS, Lee J, Kim H, Kim S, Yang J, Han YH, Lee J, Seok C, Lee MS, Song WJ, Steinegger M.	Nucleic Acids Res	10.1093/nar/gkae1245	2025
	Using microbial genome annotation as a foundation for collaborative student research.	Reed KE, Richardson JM.	Biochem Mol Biol Educ	10.1002/bmb.20663	2013
	A programmable pAgo nuclease with RNA target-cleavage specificity from the mesophilic bacterium Verrucomicrobia.	Liu Q, Chen W, Zhang Y, Hu F, Jiang X, Wang F, Liu Y, Ma L.	Acta Biochim Biophys Sin (Shanghai)	10.3724/abbs.2023110	2023
	Mechanistic conformational and substrate selectivity profiles emerging in the evolution of enzymes via parallel trajectories.	Karamitros CS, Murray K, Kumada Y, Johnson KA, D'Arcy S, Georgiou G.	Nat Commun	10.1038/s41467-024-51133-y	2024
Genetics	High-quality-draft genome sequence of the heavy metal resistant and exopolysaccharides producing bacterium Mucilaginibacter pedocola TBZ30^T.	Fan X, Tang J, Nie L, Huang J, Wang G.	Stand Genomic Sci	10.1186/s40793-018-0337-8	2018
Metabolism	Molecular Cloning, Characterization, and Functional Analysis of Acetyl-CoA C-Acetyltransferase and Mevalonate Kinase Genes Involved in Terpene Trilactone Biosynthesis from Ginkgo biloba.	Chen Q, Yan J, Meng X, Xu F, Zhang W, Liao Y, Qu J.	Molecules	10.3390/molecules22010074	2017
	Marine viruses disperse bidirectionally along the natural water cycle.	Rahlff J, Esser SP, Plewka J, Heinrichs ME, Soares A, Scarchilli C, Grigioni P, Wex H, Giebel HA, Probst AJ.	Nat Commun	10.1038/s41467-023-42125-5	2023
	Microbial Community and Metabolic Activity in Thiocyanate Degrading Low Temperature Microbial Fuel Cells.	Ni G, Canizales S, Broman E, Simone D, Palwai VR, Lundin D, Lopez-Fernandez M, Sleutels T, Dopson M.	Front Microbiol	10.3389/fmicb.2018.02308	2018
	Bypassing evolutionary dead ends and switching the rate-limiting step of a human immunotherapeutic enzyme.	Blazeck J, Karamitros CS, Ford K, Somody C, Qerqez A, Murray K, Burkholder NT, Marshall N, Sivakumar A, Lu WC, Tan B, Lamb C, Tanno Y, Siddiqui MY, Ashoura N, Coma S, Zhang XM, McGovern K, Kumada Y, Zhang YJ, Manfredi M, Johnson KA, D'Arcy S, Stone E, Georgiou G.	Nat Catal	10.1038/s41929-022-00856-6	2022
	Complete genome sequence of the gliding, heparinolytic Pedobacter saltans type strain (113).	Liolios K, Sikorski J, Lu M, Nolan M, Lapidus A, Lucas S, Hammon N, Deshpande S, Cheng JF, Tapia R, Han C, Goodwin L, Pitluck S, Huntemann M, Ivanova N, Pagani I, Mavromatis K, Ovchinikova G, Pati A, Chen A, Palaniappan K, Land M, Hauser L, Brambilla EM, Kotsyurbenko O, Rohde M, Tindall BJ, Abt B, Goker M, Detter JC, Woyke T, Bristow J, Eisen JA, Markowitz V, Hugenholtz P, Klenk HP, Kyrpides NC.	Stand Genomic Sci	10.4056/sigs.2154937	2011
Metabolism	Reversal of indoleamine 2,3-dioxygenase-mediated cancer immune suppression by systemic kynurenine depletion with a therapeutic enzyme.	Triplett TA, Garrison KC, Marshall N, Donkor M, Blazeck J, Lamb C, Qerqez A, Dekker JD, Tanno Y, Lu WC, Karamitros CS, Ford K, Tan B, Zhang XM, McGovern K, Coma S, Kumada Y, Yamany MS, Sentandreu E, Fromm G, Tiziani S, Schreiber TH, Manfredi M, Ehrlich LIR, Stone E, Georgiou G.	Nat Biotechnol	10.1038/nbt.4180	2018
Phylogeny	Genome-Based Taxonomic Classification of Bacteroidetes.	Hahnke RL, Meier-Kolthoff JP, Garcia-Lopez M, Mukherjee S, Huntemann M, Ivanova NN, Woyke T, Kyrpides NC, Klenk HP, Goker M.	Front Microbiol	10.3389/fmicb.2016.02003	2016
	Mucilaginibacter rivuli sp. nov., isolated from a water rivulet.	Bae S, Kang H, Kim H, Joh K.	Int J Syst Evol Microbiol	10.1099/ijsem.0.005520	2022
	Mucilaginibacter aquariorum sp. nov., Isolated from Fresh Water.	Le VV, Ko SR, Kang M, Oh HM, Ahn CY.	J Microbiol Biotechnol	10.4014/jmb.2208.08021	2022
Phylogeny	Mucilaginibacter myungsuensis sp. nov., isolated from a mesotrophic artificial lake.	Joung Y, Joh K.	Int J Syst Evol Microbiol	10.1099/ijs.0.022798-0	2011
Phylogeny	Mucilaginibacter daejeonensis sp. nov., isolated from dried rice straw.	An DS, Yin CR, Lee ST, Cho CH.	Int J Syst Evol Microbiol	10.1099/ijs.0.003384-0	2009
Phylogeny	Mucilaginibacter rigui sp. nov., isolated from wetland freshwater, and emended description of the genus Mucilaginibacter.	Baik KS, Park SC, Kim EM, Lim CH, Seong CN	Int J Syst Evol Microbiol	10.1099/ijs.0.011130-0	2009
Phylogeny	Mucilaginibacter paludis gen. nov., sp. nov. and Mucilaginibacter gracilis sp. nov., pectin-, xylan- and laminarin-degrading members of the family Sphingobacteriaceae from acidic Sphagnum peat bog.	Pankratov TA, Tindall BJ, Liesack W, Dedysh SN	Int J Syst Evol Microbiol	10.1099/ijs.0.65100-0	2007

References

#7617	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 18603
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#28434	IJSEM 2349 2007 ( DOI 10.1099/ijs.0.65100-0 , PubMed 17911309 )
#32192	Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #28434
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#66793	Mukherjee et al.: GEBA: 1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree of life. 35: 676 - 683 2017 ( DOI 10.1038/nbt.3886 , PubMed 28604660 )
#66794	Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 )
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Mucilaginibacter paludis (DSM 18603, ATCC BAA-1394, VKM B-2446)

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