Name: Mucilaginibacter paludis TPT56
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 14134

Type strain:

Species: Mucilaginibacter paludis

Strain Designation: TPT56

Culture col. no.: DSM 18603, ATCC BAA-1394, VKM B-2446

Strain history: <- S. N. Dedysh, Winogradski Inst. Microbiol., RAS, Moscow, Russia; TPT56 <- T. A. Pankratov

NCBI tax ID(s): 714943 (strain), 423351 (species)

SI-ID 402696

DSM 18603

Section

Mucilaginibacter paludis TPT56 is a facultative aerobe, heterotroph, mesophilic bacterium that forms circular colonies and was isolated from sample collected from 10–20 cm below the surface of the Sphagnum peat bog Bakchar.

colony-forming
Gram-negative
rod-shaped
facultative aerobe
heterotroph
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacteroidota*
	Class	*Sphingobacteriia*
	Order	*Sphingobacteriales*
	Family	*Sphingobacteriaceae*
	Genus	*Mucilaginibacter*
	Species	**Mucilaginibacter paludis**
	Full Scientific Name (LPSN)	Mucilaginibacter paludis Pankratov et al. 2007

Information on morphological and physiological properties Morphology

[Ref.: #32192]	Gram stain	negative
[Ref.: #28434]	Gram stain	negative
[Ref.: #69480]	Gram stain	negative Confidence in %99.943

[Ref.: #32192]	Cell length	20.75 µm
[Ref.: #28434]	Cell length	6-15 µm

[Ref.: #32192]	Cell width	0.65 µm
[Ref.: #28434]	Cell width	0.5-0.8 µm

[Ref.: #32192]	Cell shape	rod-shaped
[Ref.: #28434]	Cell shape	rod-shaped

[Ref.: #32192]	Motility	no
[Ref.: #28434]	Motility	no

[Ref.: #28434]	Colony size	3-10 mm
[Ref.: #28434]	Colony color	light pink to reddish
[Ref.: #28434]	Colony shape	circular
[Ref.: #28434]	Cultivation medium used	1:10 R2A agar

[Ref.: #32192]	Pigment production	yes
[Ref.: #28434]	Pigment production	no
[Ref.: #28434]	Pigment name	Flexirubin-Type

Multimedia content

[Ref.: #66793]

Caption:

electron microscopic image

[Ref.: #66793]

Intellectual property rights:

Information on culture and growth conditions Culture and growth conditions

[Ref.: #7617]

Culture medium

R2A MEDIUM (DSMZ Medium 830)

[Ref.: #7617]

Culture medium growth

[Ref.: #7617]

Culture medium link

Medium recipe at MediaDive

[Ref.: #7617]

Culture medium composition

expand / minimize

[Ref.: #28434]

Culture medium

1:10 R2A agar

[Ref.: #28434]

Culture medium growth

		Temperature
[Ref.: #7617]	growth	25 °C
[Ref.: #28434]	optimum	20-25 °C
[Ref.: #32192]	growth	02-33 °C
[Ref.: #32192]	optimum	17.5 °C

[Ref.: #7617]	Temperature range	mesophilic
[Ref.: #32192]	Temperature range	psychrophilic

		pH
[Ref.: #32192]	optimum	6.2
[Ref.: #28434]	optimum	6-6.5
[Ref.: #32192]	growth	4.2-8.2
[Ref.: #28434]	growth	4.2-8.2

Information on physiology and metabolism Physiology and metabolism

[Ref.: #32192]	Oxygen tolerance	facultative aerobe
[Ref.: #28434]	Oxygen tolerance	facultative aerobe

[Ref.: #28434]

Nutrition type

heterotroph

[Ref.: #32192]	Ability of spore formation	no
[Ref.: #28434]	Ability of spore formation	no
[Ref.: #69481]	Ability of spore formation	no Confidence in %100
[Ref.: #69480]	Ability of spore formation	no Confidence in %99.703

	Salt		Salt conc.
[Ref.: #32192]	NaCl	growth	0-1	%
[Ref.: #32192]	NaCl	optimum	0.5	%
[Ref.: #28434]	NaCl	growth	0-1	%(w/v)

[Ref.: #32192]

Observation

aggregates in chains

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #28434]	acetate ChEBI	-	assimilation
[Ref.: #28434]	alginate ChEBI	-	hydrolysis
[Ref.: #28434]	arabinitol ChEBI	-	assimilation
[Ref.: #28434]	arbutin ChEBI	-	assimilation
[Ref.: #28434]	butyrate ChEBI	-	assimilation
[Ref.: #28434]	carboxymethylcellulose ChEBI	-	hydrolysis
[Ref.: #32192]	cellobiose ChEBI	+	carbon source
[Ref.: #28434]	cellobiose ChEBI	+	builds acid from
[Ref.: #28434]	cellobiose ChEBI	+	assimilation
[Ref.: #28434]	cellulose ChEBI	-	hydrolysis
[Ref.: #28434]	chitin ChEBI	-	hydrolysis
[Ref.: #28434]	chondroitin sulfate ChEBI	+	hydrolysis
[Ref.: #28434]	citrate ChEBI	-	assimilation
[Ref.: #28434]	D-arabinose ChEBI	-	assimilation
[Ref.: #28434]	D-fructose ChEBI	+	assimilation
[Ref.: #28434]	D-galactonate ChEBI	+	assimilation
[Ref.: #28434]	D-galactose ChEBI	+	assimilation
[Ref.: #28434]	D-glucose ChEBI	+	assimilation
[Ref.: #28434]	D-mannose ChEBI	+	assimilation
[Ref.: #28434]	D-rhamnose ChEBI	+	assimilation
[Ref.: #28434]	D-xylose ChEBI	+	assimilation
[Ref.: #28434]	decanoate ChEBI	-	assimilation
[Ref.: #28434]	esculin ChEBI	-	hydrolysis
[Ref.: #32192]	fructose ChEBI	+	carbon source
[Ref.: #28434]	fructose ChEBI	+	builds acid from
[Ref.: #28434]	fucoidan ChEBI	-	hydrolysis
[Ref.: #28434]	fumarate ChEBI	-	assimilation
[Ref.: #28434]	galactitol ChEBI	-	assimilation
[Ref.: #32192]	galactose ChEBI	+	carbon source
[Ref.: #28434]	galactose ChEBI	+	builds acid from
[Ref.: #28434]	gellan gum ChEBI	+	hydrolysis
[Ref.: #32192]	glucose ChEBI	+	carbon source
[Ref.: #28434]	glucose ChEBI	+	fermentation
[Ref.: #28434]	glucose ChEBI	+	builds acid from
[Ref.: #28434]	heparin ChEBI	-	hydrolysis
[Ref.: #28434]	inulin ChEBI	-	assimilation
[Ref.: #32192]	lactose ChEBI	+	carbon source
[Ref.: #28434]	lactose ChEBI	+	assimilation
[Ref.: #28434]	lactose ChEBI	+	builds acid from
[Ref.: #28434]	laminarin ChEBI	+	hydrolysis
[Ref.: #28434]	laminarin ChEBI	+	builds acid from
[Ref.: #28434]	leucrose ChEBI	+	assimilation
[Ref.: #28434]	lichenin ChEBI	-	hydrolysis
[Ref.: #28434]	malate ChEBI	-	assimilation
[Ref.: #32192]	maltose ChEBI	+	carbon source
[Ref.: #28434]	maltose ChEBI	+	assimilation
[Ref.: #28434]	maltose ChEBI	+	builds acid from
[Ref.: #28434]	mannitol ChEBI	-	assimilation
[Ref.: #32192]	mannose ChEBI	+	carbon source
[Ref.: #28434]	mannose ChEBI	+	builds acid from
[Ref.: #28434]	melezitose ChEBI	-	assimilation
[Ref.: #28434]	melibiose ChEBI	-	assimilation
[Ref.: #32192]	myo-inositol ChEBI	+	carbon source
[Ref.: #28434]	myo-inositol ChEBI	+	assimilation
[Ref.: #32192]	N-acetylglucosamine ChEBI	+	carbon source
[Ref.: #28434]	N-acetylglucosamine ChEBI	+	assimilation
[Ref.: #28434]	propionate ChEBI	-	assimilation
[Ref.: #28434]	pullulan ChEBI	+	hydrolysis
[Ref.: #28434]	pyruvate ChEBI	-	assimilation
[Ref.: #28434]	raffinose ChEBI	-	assimilation
[Ref.: #32192]	rhamnose ChEBI	+	carbon source
[Ref.: #28434]	rhamnose ChEBI	+	builds acid from
[Ref.: #28434]	ribitol ChEBI	-	assimilation
[Ref.: #28434]	salicin ChEBI	-	assimilation
[Ref.: #28434]	sorbitol ChEBI	-	assimilation
[Ref.: #28434]	spectinomycin ChEBI	+	hydrolysis
[Ref.: #28434]	starch ChEBI	+	hydrolysis
[Ref.: #28434]	succinate ChEBI	-	assimilation
[Ref.: #32192]	sucrose ChEBI	+	carbon source
[Ref.: #28434]	sucrose ChEBI	+	assimilation
[Ref.: #28434]	sucrose ChEBI	+	fermentation
[Ref.: #28434]	sucrose ChEBI	+	builds acid from
[Ref.: #32192]	trehalose ChEBI	+	carbon source
[Ref.: #28434]	trehalose ChEBI	+	assimilation
[Ref.: #28434]	valerate ChEBI	-	assimilation
[Ref.: #28434]	xylan ChEBI	+	hydrolysis
[Ref.: #28434]	xylan ChEBI	+	builds acid from
[Ref.: #32192]	xylose ChEBI	+	carbon source
[Ref.: #28434]	xylose ChEBI	+	builds acid from
	Only first 10 entries are displayed. Click here to see all.

	Metabolite	Antibiotic sensitivity	Concentration		Antibiotic resistance	Concentration
[Ref.: #28434]	ampicillin ChEBI				yes	10	µg
[Ref.: #28434]	chloramphenicol ChEBI	yes	30	µg
[Ref.: #28434]	gentamicin ChEBI				yes	10	µg
[Ref.: #28434]	kanamycin ChEBI				yes	30	µg
[Ref.: #28434]	lincomycin ChEBI				yes	10	µg
[Ref.: #28434]	neomycin ChEBI				yes	10	µg
[Ref.: #28434]	novobiocin ChEBI				yes	10	µg
[Ref.: #28434]	streptomycin ChEBI	yes	10	µg

	Enzymes	Enzyme	Enzyme activity	EC number
[Ref.: #32192]		catalase	+	1.11.1.6
[Ref.: #32192]		cytochrome oxidase	+	1.9.3.1

	Pathway	Enzyme coverage	Annotated reactions
	Pathway annotation	Computationally determined by
[Ref.: #66794]	anapleurotic synthesis of oxalacetate	100	1 of 1
[Ref.: #66794]	palmitate biosynthesis	100	22 of 22
[Ref.: #66794]	ppGpp biosynthesis	100	4 of 4
[Ref.: #66794]	methylglyoxal degradation	100	5 of 5
[Ref.: #66794]	valine metabolism	100	9 of 9
[Ref.: #66794]	starch degradation	100	10 of 10
[Ref.: #66794]	biotin biosynthesis	100	4 of 4
[Ref.: #66794]	L-lactaldehyde degradation	100	3 of 3
[Ref.: #66794]	adipate degradation	100	2 of 2
[Ref.: #66794]	acetate fermentation	100	4 of 4
[Ref.: #66794]	CMP-KDO biosynthesis	100	4 of 4
[Ref.: #66794]	1,4-dihydroxy-6-naphthoate biosynthesis	100	6 of 6
[Ref.: #66794]	ceramide biosynthesis	100	1 of 1
[Ref.: #66794]	suberin monomers biosynthesis	100	2 of 2
[Ref.: #66794]	UDP-GlcNAc biosynthesis	100	3 of 3
[Ref.: #66794]	CDP-diacylglycerol biosynthesis	100	2 of 2
[Ref.: #66794]	sulfopterin metabolism	100	4 of 4
[Ref.: #66794]	coenzyme A metabolism	100	4 of 4
[Ref.: #66794]	formaldehyde oxidation	100	3 of 3
[Ref.: #66794]	allantoin degradation	100	9 of 9
[Ref.: #66794]	glycogen metabolism	100	5 of 5
[Ref.: #66794]	folate polyglutamylation	100	1 of 1
[Ref.: #66794]	cellulose degradation	100	5 of 5
[Ref.: #66794]	cis-vaccenate biosynthesis	100	2 of 2
[Ref.: #66794]	gluconeogenesis	100	8 of 8
[Ref.: #66794]	NAD metabolism	94.44	17 of 18
[Ref.: #66794]	tetrahydrofolate metabolism	92.86	13 of 14
[Ref.: #66794]	photosynthesis	92.86	13 of 14
[Ref.: #66794]	threonine metabolism	90	9 of 10
[Ref.: #66794]	Entner Doudoroff pathway	90	9 of 10
[Ref.: #66794]	molybdenum cofactor biosynthesis	88.89	8 of 9
[Ref.: #66794]	chorismate metabolism	88.89	8 of 9
[Ref.: #66794]	lipid A biosynthesis	88.89	8 of 9
[Ref.: #66794]	C4 and CAM-carbon fixation	87.5	7 of 8
[Ref.: #66794]	heme metabolism	85.71	12 of 14
[Ref.: #66794]	ubiquinone biosynthesis	85.71	6 of 7
[Ref.: #66794]	reductive acetyl coenzyme A pathway	85.71	6 of 7
[Ref.: #66794]	vitamin B1 metabolism	84.62	11 of 13
[Ref.: #66794]	phenylalanine metabolism	84.62	11 of 13
[Ref.: #66794]	alanine metabolism	82.76	24 of 29
[Ref.: #66794]	pyrimidine metabolism	82.22	37 of 45
[Ref.: #66794]	proline metabolism	81.82	9 of 11
[Ref.: #66794]	pentose phosphate pathway	81.82	9 of 11
[Ref.: #66794]	peptidoglycan biosynthesis	80	12 of 15
[Ref.: #66794]	metabolism of amino sugars and derivatives	80	4 of 5
[Ref.: #66794]	flavin biosynthesis	80	12 of 15
[Ref.: #66794]	purine metabolism	79.79	75 of 94
[Ref.: #66794]	glutathione metabolism	78.57	11 of 14
[Ref.: #66794]	glutamate and glutamine metabolism	78.57	22 of 28
[Ref.: #66794]	CO2 fixation in Crenarchaeota	77.78	7 of 9
[Ref.: #66794]	aspartate and asparagine metabolism	77.78	7 of 9
[Ref.: #66794]	d-mannose degradation	77.78	7 of 9
[Ref.: #66794]	serine metabolism	77.78	7 of 9
[Ref.: #66794]	degradation of hexoses	77.78	14 of 18
[Ref.: #66794]	leucine metabolism	76.92	10 of 13
[Ref.: #66794]	degradation of sugar alcohols	75	12 of 16
[Ref.: #66794]	dTDPLrhamnose biosynthesis	75	6 of 8
[Ref.: #66794]	glycogen biosynthesis	75	3 of 4
[Ref.: #66794]	isoleucine metabolism	75	6 of 8
[Ref.: #66794]	methionine metabolism	73.08	19 of 26
[Ref.: #66794]	isoprenoid biosynthesis	73.08	19 of 26
[Ref.: #66794]	cardiolipin biosynthesis	71.43	5 of 7
[Ref.: #66794]	degradation of pentoses	71.43	20 of 28
[Ref.: #66794]	glycolysis	70.59	12 of 17
[Ref.: #66794]	degradation of sugar acids	68	17 of 25
[Ref.: #66794]	cyanate degradation	66.67	2 of 3
[Ref.: #66794]	cysteine metabolism	66.67	12 of 18
[Ref.: #66794]	acetoin degradation	66.67	2 of 3
[Ref.: #66794]	octane oxidation	66.67	2 of 3
[Ref.: #66794]	acetyl CoA biosynthesis	66.67	2 of 3
[Ref.: #66794]	lipid metabolism	64.52	20 of 31
[Ref.: #66794]	citric acid cycle	64.29	9 of 14
[Ref.: #66794]	tyrosine metabolism	64.29	9 of 14
[Ref.: #66794]	vitamin B6 metabolism	63.64	7 of 11
[Ref.: #66794]	d-xylose degradation	63.64	7 of 11
[Ref.: #66794]	metabolism of disaccharids	63.64	7 of 11
[Ref.: #66794]	tryptophan metabolism	63.16	24 of 38
[Ref.: #66794]	ketogluconate metabolism	62.5	5 of 8
[Ref.: #66794]	6-hydroxymethyl-dihydropterin diphosphate biosynthesis	62.5	5 of 8
[Ref.: #66794]	histidine metabolism	62.07	18 of 29
[Ref.: #66794]	sulfate reduction	61.54	8 of 13
[Ref.: #66794]	urea cycle	61.54	8 of 13
[Ref.: #66794]	non-pathway related	60.53	23 of 38
[Ref.: #66794]	gallate degradation	60	3 of 5
[Ref.: #66794]	phenylacetate degradation (aerobic)	60	3 of 5
[Ref.: #66794]	glycine betaine biosynthesis	60	3 of 5
[Ref.: #66794]	propionate fermentation	60	6 of 10
[Ref.: #66794]	coenzyme M biosynthesis	60	6 of 10
[Ref.: #66794]	arachidonate biosynthesis	60	3 of 5
[Ref.: #66794]	degradation of aromatic, nitrogen containing compounds	58.33	7 of 12
[Ref.: #66794]	propanol degradation	57.14	4 of 7
[Ref.: #66794]	lysine metabolism	57.14	24 of 42
[Ref.: #66794]	4-hydroxymandelate degradation	55.56	5 of 9
[Ref.: #66794]	arginine metabolism	54.17	13 of 24
[Ref.: #66794]	phenylpropanoid biosynthesis	53.85	7 of 13
[Ref.: #66794]	oxidative phosphorylation	51.65	47 of 91
[Ref.: #66794]	cyclohexanol degradation	50	2 of 4
[Ref.: #66794]	selenocysteine biosynthesis	50	3 of 6
[Ref.: #66794]	glycine metabolism	50	5 of 10
[Ref.: #66794]	lactate fermentation	50	2 of 4
[Ref.: #66794]	phenylmercury acetate degradation	50	1 of 2
[Ref.: #66794]	butanoate fermentation	50	2 of 4
[Ref.: #66794]	quinate degradation	50	1 of 2
[Ref.: #66794]	ethanol fermentation	50	1 of 2
[Ref.: #66794]	3-phenylpropionate degradation	46.67	7 of 15
[Ref.: #66794]	phosphatidylethanolamine bioynthesis	46.15	6 of 13
[Ref.: #66794]	ascorbate metabolism	45.45	10 of 22
[Ref.: #66794]	carotenoid biosynthesis	45.45	10 of 22
[Ref.: #66794]	phenol degradation	45	9 of 20
[Ref.: #66794]	nitrate assimilation	44.44	4 of 9
[Ref.: #66794]	arachidonic acid metabolism	44.44	8 of 18
[Ref.: #66794]	androgen and estrogen metabolism	43.75	7 of 16
[Ref.: #66794]	hydrogen production	40	2 of 5
[Ref.: #66794]	lipoate biosynthesis	40	2 of 5
[Ref.: #66794]	4-hydroxyphenylacetate degradation	40	4 of 10
[Ref.: #66794]	elloramycin biosynthesis	40	2 of 5
[Ref.: #66794]	3-chlorocatechol degradation	40	2 of 5
[Ref.: #66794]	O-antigen biosynthesis	40	2 of 5
[Ref.: #66794]	ethylmalonyl-CoA pathway	40	2 of 5
[Ref.: #66794]	IAA biosynthesis	33.33	1 of 3
[Ref.: #66794]	glycolate and glyoxylate degradation	33.33	2 of 6
[Ref.: #66794]	sphingosine metabolism	33.33	2 of 6
[Ref.: #66794]	chlorophyll metabolism	33.33	6 of 18
[Ref.: #66794]	enterobactin biosynthesis	33.33	1 of 3
[Ref.: #66794]	sulfoquinovose degradation	33.33	1 of 3
[Ref.: #66794]	pantothenate biosynthesis	33.33	2 of 6
[Ref.: #66794]	(5R)-carbapenem carboxylate biosynthesis	33.33	1 of 3
[Ref.: #66794]	myo-inositol biosynthesis	30	3 of 10
[Ref.: #66794]	bile acid biosynthesis, neutral pathway	29.41	5 of 17
[Ref.: #66794]	mevalonate metabolism	28.57	2 of 7
[Ref.: #66794]	dolichyl-diphosphooligosaccharide biosynthesis	27.27	3 of 11
[Ref.: #66794]	cholesterol biosynthesis	27.27	3 of 11
[Ref.: #66794]	polyamine pathway	26.09	6 of 23
[Ref.: #66794]	toluene degradation	25	1 of 4
[Ref.: #66794]	methanogenesis from CO2	25	3 of 12
[Ref.: #66794]	carnitine metabolism	25	2 of 8
[Ref.: #66794]	daunorubicin biosynthesis	22.22	2 of 9
		Only first 10 entries are displayed. Click here to see all.

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #7617]	Sample type/isolated from	sample collected from 10–20 cm below the surface of the Sphagnum peat bog Bakchar
[Ref.: #7617]	Host species	Sphagnum
[Ref.: #7617]	Geographic location (country and/or sea, region)	western Siberia, Tomsk region (56° 51' N 82° 50' E)
[Ref.: #7617]	Country	Russia
[Ref.: #7617]	Country ISO 3 Code	RUS
[Ref.: #7617]	Continent	Asia
[Ref.: #7617]	Geographic location	56.8500°/82.8333°

[Ref.: #28434]	Sample type/isolated from	sphagnum peat bog Bakchar
[Ref.: #28434]	Geographic location (country and/or sea, region)	western siberia in the Tomsk Region
[Ref.: #28434]	Country	Russia
[Ref.: #28434]	Country ISO 3 Code	RUS
[Ref.: #28434]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental	#Terrestrial	#Wetland (Swamp)
#Host	#Plants	#Moss

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AM490402 (>99% sequence identity) for Mucilaginibacter paludis subclade from Microbeatlas

Aquatic Samples	75
Soil Samples	322
Animal Samples	130
Plant Samples	55
Total Samples	582

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #7617]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #7617]	Mucilaginibacter paludis partial 16S rRNA gene, strain TPT56	AM490402	1406	ENA	714943 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Mucilaginibacter paludis DSM 18603	GCA_000166195	chromosome	GenBank	714943 tax ID	*
[Ref.: #66792]	Mucilaginibacter paludis DSM 18603	714943.3	wgs	PATRIC	714943 tax ID	*
[Ref.: #66792]	Mucilaginibacter paludis TPT56, DSM 18603	2506520020	draft	JGI IMG/M	714943 tax ID	*

[Ref.: #7617]	GC-content	46.1 mol%
[Ref.: #28434]	GC-content	46.1 mol%	thermal denaturation, midpoint method (Tm)
[Ref.: #7617]	GC-content	42.9 mol%	sequence analysis

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Mucilaginibacter paludis DSM 18603 DSM 18603 NCBI: GCA_000166195.3
[Ref.: #69481]	spore-forming	no	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Mucilaginibacter paludis DSM 18603 DSM 18603 NCBI: GCA_000166195.3
[Ref.: #69480]	motile	no	89.409	yes
[Ref.: #69480]	flagellated	no	96.678	yes
[Ref.: #69480]	gram-positive	no	96.632	no
[Ref.: #69480]	anaerobic	no	98.405	yes
[Ref.: #69480]	aerobic	yes	58.088	yes
[Ref.: #69480]	halophile	no	96.887	no
[Ref.: #69480]	spore-forming	no	91.756	yes
[Ref.: #69480]	thermophile	no	99.641	yes
[Ref.: #69480]	glucose-util	yes	89.72	yes
[Ref.: #69480]	glucose-ferment	no	87.318	no

Availability in culture collections External links

[Ref.: #7617]

Culture collection no.

DSM 18603, ATCC BAA-1394, VKM B-2446

[Ref.: #83299]

SI-ID 402696

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Mucilaginibacter rigui sp. nov., isolated from wetland freshwater, and emended description of the genus Mucilaginibacter.	Baik KS, Park SC, Kim EM, Lim CH, Seong CN	Int J Syst Evol Microbiol	10.1099/ijs.0.011130-0	2009	*
Phylogeny	Mucilaginibacter paludis gen. nov., sp. nov. and Mucilaginibacter gracilis sp. nov., pectin-, xylan- and laminarin-degrading members of the family Sphingobacteriaceae from acidic Sphagnum peat bog.	Pankratov TA, Tindall BJ, Liesack W, Dedysh SN	Int J Syst Evol Microbiol	10.1099/ijs.0.65100-0	2007	*

References

#7617

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 18603

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#28434

IJSEM 2349 2007 ( DOI 10.1099/ijs.0.65100-0 , PubMed 17911309 )

#32192

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #28434 (see below)

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#66793

Mukherjee et al.: GEBA: 1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree of life. 35: 676 - 683 2017 ( DOI 10.1038/nbt.3886 , PubMed 28604660 )

#66794

Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 )

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#83299

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID402696.1 )

#28434

IJSEM 2349 2007 ( DOI 10.1099/ijs.0.65100-0 , PubMed 17911309 )

* These data were automatically processed and therefore are not curated

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Search for species Mucilaginibacter paludis in external resources:
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BRENDA
PANGAEA
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Mucilaginibacter paludis DSM 18603 DSM 18603

Mucilaginibacter paludis DSM 18603 DSM 18603

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