Name: Rhodosalinus sediminis WDN1C137
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 141161

Type strain:

Species: Rhodosalinus sediminis

Strain Designation: WDN1C137

Culture col. no.: KCTC 52478, MCCC 1H00170, DSM 108746

Strain history: <- Zongjun Du, Shandong Univ.

NCBI tax ID(s): 1940533 (species)

SI-ID 406152

DSM 108746

Section

Rhodosalinus sediminis WDN1C137 is a facultative anaerobe, moderately halophilic, Gram-negative bacterium that was isolated from marine saltern.

Gram-negative
motile
rod-shaped
facultative anaerobe
moderately halophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Alphaproteobacteria*
	Order	*Rhodobacterales*
	Family	*Roseobacteraceae*
	Genus	*Rhodosalinus*
	Species	**Rhodosalinus sediminis**
	Full Scientific Name (LPSN)	Rhodosalinus sediminis Guo et al. 2017

Information on morphological and physiological properties Morphology

[Ref.: #44082]	Gram stain	negative
[Ref.: #69480]	Gram stain	negative Confidence in %99.998

[Ref.: #44082]	Cell length	0.6-3.0 µm

[Ref.: #44082]	Cell width	0.4-1.2 µm

[Ref.: #44082]	Cell shape	rod-shaped

[Ref.: #44082]	Motility	yes

[Ref.: #44082]	Flagellum arrangement	polar

[Ref.: #44082]

Colony color

red

Information on culture and growth conditions Culture and growth conditions

[Ref.: #44082]

Culture medium

Marine agar (MA)

[Ref.: #44082]

Culture medium growth

		Temperature
[Ref.: #44082]	growth	20-45 °C
[Ref.: #44082]	optimum	40 °C
[Ref.: #67771]	growth	40 °C

[Ref.: #44082]	Temperature range	thermophilic
[Ref.: #67771]	Temperature range	thermophilic

	pH	Kind of pH		pH
[Ref.: #44082]			optimum	7.5
[Ref.: #44082]			growth	7.0-8.5

Information on physiology and metabolism Physiology and metabolism

[Ref.: #44082]	Oxygen tolerance	facultative anaerobe
[Ref.: #67771]	Oxygen tolerance	aerobe

[Ref.: #69480]

Ability of spore formation

no Confidence in %99.998

[Ref.: #44082]

Halophily / tolerance level

moderately halophilic

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #44082]		NaCl		growth	3.0-20	%(w/v)
[Ref.: #44082]		NaCl		optimum	7	%(w/v)

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #44082]	2-oxoglutarate ChEBI	+	oxidation
[Ref.: #44082]	acetoacetate ChEBI	+	oxidation
[Ref.: #68369]	adipate ChEBI	-	assimilation	* from API 20NE
[Ref.: #44082]	arginine ChEBI	-	hydrolysis
[Ref.: #68369]	arginine ChEBI	-	hydrolysis	* from API 20NE
[Ref.: #44082]	beta-hydroxybutyrate ChEBI	+	oxidation
[Ref.: #44082]	citrate ChEBI	-	carbon source
[Ref.: #44082]	D-fructose ChEBI	+	builds acid from
[Ref.: #44082]	D-fructose 6-phosphate ChEBI	+	oxidation
[Ref.: #68369]	D-glucose ChEBI	-	assimilation	* from API 20NE
[Ref.: #68369]	D-glucose ChEBI	-	fermentation	* from API 20NE
[Ref.: #44082]	D-glucuronate ChEBI	+	oxidation
[Ref.: #44082]	D-lyxose ChEBI	+/-	builds acid from
[Ref.: #68369]	D-mannitol ChEBI	-	assimilation	* from API 20NE
[Ref.: #68369]	D-mannose ChEBI	-	assimilation	* from API 20NE
[Ref.: #44082]	D-ribose ChEBI	+	builds acid from
[Ref.: #44082]	D-tagatose ChEBI	+	builds acid from
[Ref.: #44082]	D-xylose ChEBI	+/-	builds acid from
[Ref.: #68369]	decanoate ChEBI	-	assimilation	* from API 20NE
[Ref.: #68369]	esculin ChEBI	-	hydrolysis	* from API 20NE
[Ref.: #44082]	gelatin ChEBI	+	hydrolysis
[Ref.: #68369]	gelatin ChEBI	-	hydrolysis	* from API 20NE
[Ref.: #68369]	gluconate ChEBI	-	assimilation	* from API 20NE
[Ref.: #44082]	glucuronamide ChEBI	+	oxidation
[Ref.: #68369]	L-arabinose ChEBI	-	assimilation	* from API 20NE
[Ref.: #44082]	L-sorbose ChEBI	+	builds acid from
[Ref.: #44082]	L-xylose ChEBI	+/-	builds acid from
[Ref.: #44082]	lysine ChEBI	-	hydrolysis
[Ref.: #68369]	malate ChEBI	-	assimilation	* from API 20NE
[Ref.: #68369]	maltose ChEBI	-	assimilation	* from API 20NE
[Ref.: #68369]	N-acetylglucosamine ChEBI	-	assimilation	* from API 20NE
[Ref.: #44082]	nitrate ChEBI	-	reduction
[Ref.: #68369]	nitrate ChEBI	-	reduction	* from API 20NE
[Ref.: #44082]	ornithine ChEBI	-	hydrolysis
[Ref.: #44082]	potassium 2-dehydro-D-gluconate	+/-	builds acid from
[Ref.: #44082]	potassium 5-dehydro-D-gluconate	+	builds acid from
[Ref.: #44082]	tryptophan ChEBI	-	hydrolysis
[Ref.: #68369]	tryptophan ChEBI	-	energy source	* from API 20NE
[Ref.: #44082]	turanose ChEBI	+	oxidation
[Ref.: #44082]	tween 20 ChEBI	-	hydrolysis
[Ref.: #44082]	tween 40 ChEBI	+	hydrolysis
[Ref.: #44082]	tween 60 ChEBI	+	hydrolysis
[Ref.: #44082]	tween 80 ChEBI	-	hydrolysis
[Ref.: #68369]	urea ChEBI	-	hydrolysis	* from API 20NE
	Only first 10 entries are displayed. Click here to see all.

	Metabolite	Antibiotic sensitivity	Concentration		Antibiotic resistance	Concentration
[Ref.: #44082]	acetylspiramycin ChEBI				yes	30	µg (disc)
[Ref.: #44082]	ceftriaxone ChEBI				yes	30	µg (disc)
[Ref.: #44082]	chloramphenicol ChEBI				yes	30	µg (disc)
[Ref.: #44082]	erythromycin ChEBI				yes	15	µg (disc)
[Ref.: #44082]	gentamicin ChEBI	yes	10	µg (disc)
[Ref.: #44082]	kanamycin ChEBI	yes	30	µg (disc)
[Ref.: #44082]	lincomycin ChEBI	yes	2	µg (disc)
[Ref.: #44082]	norfloxacin ChEBI	yes	30	µg (disc)
[Ref.: #44082]	rifampicin ChEBI				yes	5	µg (disc)
[Ref.: #44082]	tetracycline ChEBI	yes	30	µg (disc)
[Ref.: #44082]	tobramycin ChEBI	yes	10	µg (disc)
[Ref.: #44082]	vancomycin ChEBI	yes	30	µg (disc)
	Only first 10 entries are displayed. Click here to see all.

	Metabolite	Production
[Ref.: #44082]	acetoin ChEBI	yes
[Ref.: #44082]	hydrogen sulfide ChEBI	no
[Ref.: #44082]	indole ChEBI	no
[Ref.: #68369]	indole ChEBI	no	* from API 20NE

	Metabolite	Voges-Proskauer-test	Indole test	Citrate test
[Ref.: #44082]	acetoin ChEBI	+
[Ref.: #44082]	citrate ChEBI			-
[Ref.: #68369]	indole ChEBI		-		* from API 20NE

	Enzyme	Enzyme activity	EC number
[Ref.: #44082]	acid phosphatase	-	3.1.3.2
[Ref.: #68382]	acid phosphatase	-	3.1.3.2	* from API zym
[Ref.: #44082]	alkaline phosphatase	-	3.1.3.1
[Ref.: #68382]	alkaline phosphatase	-	3.1.3.1	* from API zym
[Ref.: #44082]	alpha-chymotrypsin	-	3.4.21.1
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #44082]	alpha-galactosidase	-	3.2.1.22
[Ref.: #68382]	alpha-galactosidase	-	3.2.1.22	* from API zym
[Ref.: #44082]	alpha-glucosidase	-	3.2.1.20
[Ref.: #68382]	alpha-glucosidase	-	3.2.1.20	* from API zym
[Ref.: #44082]	alpha-mannosidase	-	3.2.1.24
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #68369]	arginine dihydrolase	-	3.5.3.6	* from API 20NE
[Ref.: #44082]	beta-D-fucosidase	-	3.2.1.38
[Ref.: #44082]	beta-galactosidase	-	3.2.1.23
[Ref.: #68382]	beta-galactosidase	-	3.2.1.23	* from API zym
[Ref.: #44082]	beta-glucosidase	-	3.2.1.21
[Ref.: #68369]	beta-glucosidase	-	3.2.1.21	* from API 20NE, API zym
[Ref.: #44082]	beta-glucuronidase	-	3.2.1.31
[Ref.: #68382]	beta-glucuronidase	-	3.2.1.31	* from API zym
[Ref.: #44082]	catalase	+	1.11.1.6
[Ref.: #44082]	cystine arylamidase	-	3.4.11.3
[Ref.: #68382]	cystine arylamidase	-	3.4.11.3	* from API zym
[Ref.: #44082]	cytochrome oxidase	+/-	1.9.3.1
[Ref.: #44082]	esterase (C 4)	+
[Ref.: #68382]	esterase (C 4)	-		* from API zym
[Ref.: #44082]	esterase Lipase (C 8)	+
[Ref.: #68382]	esterase lipase (C 8)	-		* from API zym
[Ref.: #68369]	gelatinase	-		* from API 20NE
[Ref.: #44082]	leucine arylamidase	+	3.4.11.1
[Ref.: #68382]	leucine arylamidase	-	3.4.11.1	* from API zym
[Ref.: #44082]	lipase (C 14)	-
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #44082]	N-acetyl-beta-glucosaminidase	-	3.2.1.52
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API zym
[Ref.: #44082]	naphthol-AS-BI-phosphohydrolase	-
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	-		* from API zym
[Ref.: #44082]	trypsin	-	3.4.21.4
[Ref.: #68382]	trypsin	-	3.4.21.4	* from API zym
[Ref.: #68369]	urease	-	3.5.1.5	* from API 20NE
[Ref.: #44082]	valine arylamidase	-
[Ref.: #68382]	valine arylamidase	-		* from API zym
	Only first 10 entries are displayed. Click here to see all.

Fatty acid profile

Metadata FA analysis

Reference

[Ref.: #44082]

Fatty acid	Percentage
C18:1ω7c	46.2
cyclo C19:0ω8c	18.7
C16:0	12.3
C19:1ω6c / unkoωn ECL 18.846	9
C18:0	7.7
C17:0	2.7
11-methyl C18:1ω7c	1.2

API® 20NE:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Reduction of nitratesNO3	Indole productionTRP	Fermentation of D-glucoseGLU_ Ferm	Arginine dihydrolaseADH (Arg)	Urease/urea hydrolysisURE	Esculin hydrolysis/beta-GlucosidaseESC	Gelatinase/gelatin hydrolysisGEL	beta-GalactosidasePNPG	Assimilation of D-glucoseGLU_ Assim	Assimilation of L-arabinoseARA	Assimilation of D-mannoseMNE	Assimilation of D-mannitolMAN	Assimilation of N-acetyl-glucosamineNAG	Assimilation of maltoseMAL	Assimilation of gluconateGNT	Assimilation of capric acidCAP	Assimilation adipic acidADI	Assimilation of malic acidMLT	Assimilation of citric acidCIT	Assimilation of phenyl-acetic acidPAC	Cytochrome oxidaseOX
[Ref.: #64984]	24803	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	not determinedn.d.

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #64984]	14137	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-

	Pathway	Enzyme coverage	Annotated reactions
	Pathway annotation	Computationally determined by
[Ref.: #66794]	denitrification	100	2 of 2
[Ref.: #66794]	palmitate biosynthesis	100	22 of 22
[Ref.: #66794]	gluconeogenesis	100	8 of 8
[Ref.: #66794]	C4 and CAM-carbon fixation	100	8 of 8
[Ref.: #66794]	methylglyoxal degradation	100	5 of 5
[Ref.: #66794]	ethylmalonyl-CoA pathway	100	5 of 5
[Ref.: #66794]	CMP-KDO biosynthesis	100	4 of 4
[Ref.: #66794]	octane oxidation	100	3 of 3
[Ref.: #66794]	adipate degradation	100	2 of 2
[Ref.: #66794]	cis-vaccenate biosynthesis	100	2 of 2
[Ref.: #66794]	ppGpp biosynthesis	100	4 of 4
[Ref.: #66794]	phenylacetate degradation (aerobic)	100	5 of 5
[Ref.: #66794]	formaldehyde oxidation	100	3 of 3
[Ref.: #66794]	anapleurotic synthesis of oxalacetate	100	1 of 1
[Ref.: #66794]	suberin monomers biosynthesis	100	2 of 2
[Ref.: #66794]	folate polyglutamylation	100	1 of 1
[Ref.: #66794]	UDP-GlcNAc biosynthesis	100	3 of 3
[Ref.: #66794]	CDP-diacylglycerol biosynthesis	100	2 of 2
[Ref.: #66794]	L-lactaldehyde degradation	100	3 of 3
[Ref.: #66794]	valine metabolism	100	9 of 9
[Ref.: #66794]	butanoate fermentation	100	4 of 4
[Ref.: #66794]	coenzyme A metabolism	100	4 of 4
[Ref.: #66794]	threonine metabolism	90	9 of 10
[Ref.: #66794]	serine metabolism	88.89	8 of 9
[Ref.: #66794]	chorismate metabolism	88.89	8 of 9
[Ref.: #66794]	heme metabolism	85.71	12 of 14
[Ref.: #66794]	vitamin B1 metabolism	84.62	11 of 13
[Ref.: #66794]	phenylalanine metabolism	84.62	11 of 13
[Ref.: #66794]	peptidoglycan biosynthesis	80	12 of 15
[Ref.: #66794]	glycine betaine biosynthesis	80	4 of 5
[Ref.: #66794]	Entner Doudoroff pathway	80	8 of 10
[Ref.: #66794]	tyrosine metabolism	78.57	11 of 14
[Ref.: #66794]	photosynthesis	78.57	11 of 14
[Ref.: #66794]	lipid A biosynthesis	77.78	7 of 9
[Ref.: #66794]	allantoin degradation	77.78	7 of 9
[Ref.: #66794]	CO2 fixation in Crenarchaeota	77.78	7 of 9
[Ref.: #66794]	molybdenum cofactor biosynthesis	77.78	7 of 9
[Ref.: #66794]	aspartate and asparagine metabolism	77.78	7 of 9
[Ref.: #66794]	purine metabolism	77.66	73 of 94
[Ref.: #66794]	leucine metabolism	76.92	10 of 13
[Ref.: #66794]	sulfopterin metabolism	75	3 of 4
[Ref.: #66794]	isoleucine metabolism	75	6 of 8
[Ref.: #66794]	glutamate and glutamine metabolism	75	21 of 28
[Ref.: #66794]	glycogen biosynthesis	75	3 of 4
[Ref.: #66794]	acetate fermentation	75	3 of 4
[Ref.: #66794]	flavin biosynthesis	73.33	11 of 15
[Ref.: #66794]	proline metabolism	72.73	8 of 11
[Ref.: #66794]	alanine metabolism	72.41	21 of 29
[Ref.: #66794]	NAD metabolism	72.22	13 of 18
[Ref.: #66794]	glutathione metabolism	71.43	10 of 14
[Ref.: #66794]	ubiquinone biosynthesis	71.43	5 of 7
[Ref.: #66794]	reductive acetyl coenzyme A pathway	71.43	5 of 7
[Ref.: #66794]	propanol degradation	71.43	5 of 7
[Ref.: #66794]	cardiolipin biosynthesis	71.43	5 of 7
[Ref.: #66794]	citric acid cycle	71.43	10 of 14
[Ref.: #66794]	propionate fermentation	70	7 of 10
[Ref.: #66794]	d-mannose degradation	66.67	6 of 9
[Ref.: #66794]	arginine metabolism	66.67	16 of 24
[Ref.: #66794]	glycolate and glyoxylate degradation	66.67	4 of 6
[Ref.: #66794]	enterobactin biosynthesis	66.67	2 of 3
[Ref.: #66794]	acetoin degradation	66.67	2 of 3
[Ref.: #66794]	methionine metabolism	65.38	17 of 26
[Ref.: #66794]	isoprenoid biosynthesis	65.38	17 of 26
[Ref.: #66794]	oxidative phosphorylation	64.84	59 of 91
[Ref.: #66794]	pyrimidine metabolism	64.44	29 of 45
[Ref.: #66794]	lysine metabolism	64.29	27 of 42
[Ref.: #66794]	vitamin B6 metabolism	63.64	7 of 11
[Ref.: #66794]	pentose phosphate pathway	63.64	7 of 11
[Ref.: #66794]	tryptophan metabolism	63.16	24 of 38
[Ref.: #66794]	non-pathway related	63.16	24 of 38
[Ref.: #66794]	degradation of sugar alcohols	62.5	10 of 16
[Ref.: #66794]	6-hydroxymethyl-dihydropterin diphosphate biosynthesis	62.5	5 of 8
[Ref.: #66794]	hydrogen production	60	3 of 5
[Ref.: #66794]	glycolysis	58.82	10 of 17
[Ref.: #66794]	histidine metabolism	58.62	17 of 29
[Ref.: #66794]	degradation of aromatic, nitrogen containing compounds	58.33	7 of 12
[Ref.: #66794]	lipid metabolism	58.06	18 of 31
[Ref.: #66794]	tetrahydrofolate metabolism	57.14	8 of 14
[Ref.: #66794]	cysteine metabolism	55.56	10 of 18
[Ref.: #66794]	4-hydroxymandelate degradation	55.56	5 of 9
[Ref.: #66794]	phenol degradation	55	11 of 20
[Ref.: #66794]	resorcinol degradation	50	1 of 2
[Ref.: #66794]	mannosylglycerate biosynthesis	50	1 of 2
[Ref.: #66794]	aminopropanol phosphate biosynthesis	50	1 of 2
[Ref.: #66794]	chlorophyll metabolism	50	9 of 18
[Ref.: #66794]	dTDPLrhamnose biosynthesis	50	4 of 8
[Ref.: #66794]	coenzyme M biosynthesis	50	5 of 10
[Ref.: #66794]	toluene degradation	50	2 of 4
[Ref.: #66794]	ethanol fermentation	50	1 of 2
[Ref.: #66794]	quinate degradation	50	1 of 2
[Ref.: #66794]	ketogluconate metabolism	50	4 of 8
[Ref.: #66794]	phenylmercury acetate degradation	50	1 of 2
[Ref.: #66794]	selenocysteine biosynthesis	50	3 of 6
[Ref.: #66794]	glycine metabolism	50	5 of 10
[Ref.: #66794]	bile acid biosynthesis, neutral pathway	47.06	8 of 17
[Ref.: #66794]	3-phenylpropionate degradation	46.67	7 of 15
[Ref.: #66794]	urea cycle	46.15	6 of 13
[Ref.: #66794]	sulfate reduction	46.15	6 of 13
[Ref.: #66794]	nitrate assimilation	44.44	4 of 9
[Ref.: #66794]	vitamin K metabolism	40	2 of 5
[Ref.: #66794]	lipoate biosynthesis	40	2 of 5
[Ref.: #66794]	creatinine degradation	40	2 of 5
[Ref.: #66794]	arachidonate biosynthesis	40	2 of 5
[Ref.: #66794]	glycogen metabolism	40	2 of 5
[Ref.: #66794]	3-chlorocatechol degradation	40	2 of 5
[Ref.: #66794]	phosphatidylethanolamine bioynthesis	38.46	5 of 13
[Ref.: #66794]	carnitine metabolism	37.5	3 of 8
[Ref.: #66794]	androgen and estrogen metabolism	37.5	6 of 16
[Ref.: #66794]	metabolism of disaccharids	36.36	4 of 11
[Ref.: #66794]	ascorbate metabolism	36.36	8 of 22
[Ref.: #66794]	vitamin B12 metabolism	35.29	12 of 34
[Ref.: #66794]	methane metabolism	33.33	1 of 3
[Ref.: #66794]	sphingosine metabolism	33.33	2 of 6
[Ref.: #66794]	acetyl CoA biosynthesis	33.33	1 of 3
[Ref.: #66794]	IAA biosynthesis	33.33	1 of 3
[Ref.: #66794]	arachidonic acid metabolism	33.33	6 of 18
[Ref.: #66794]	cyanate degradation	33.33	1 of 3
[Ref.: #66794]	(5R)-carbapenem carboxylate biosynthesis	33.33	1 of 3
[Ref.: #66794]	degradation of hexoses	33.33	6 of 18
[Ref.: #66794]	degradation of sugar acids	32	8 of 25
[Ref.: #66794]	polyamine pathway	30.43	7 of 23
[Ref.: #66794]	degradation of pentoses	28.57	8 of 28
[Ref.: #66794]	mevalonate metabolism	28.57	2 of 7
[Ref.: #66794]	carotenoid biosynthesis	27.27	6 of 22
[Ref.: #66794]	catecholamine biosynthesis	25	1 of 4
[Ref.: #66794]	alginate biosynthesis	25	1 of 4
[Ref.: #66794]	lactate fermentation	25	1 of 4
[Ref.: #66794]	cyclohexanol degradation	25	1 of 4
[Ref.: #66794]	biotin biosynthesis	25	1 of 4
		Only first 10 entries are displayed. Click here to see all.

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #44082]	Sample type/isolated from	marine saltern
[Ref.: #44082]	Geographic location (country and/or sea, region)	Wendeng
[Ref.: #44082]	Country	China
[Ref.: #44082]	Country ISO 3 Code	CHN
[Ref.: #44082]	Continent	Asia
[Ref.: #44082]	Geographic location	36.9657°/122.0110°
[Ref.: #44082]	Enrichment culture	marine agar 2216 (MA; Difco)
[Ref.: #44082]	Enrichment culture composition	supplemented with 7% (W/V) NaCl
[Ref.: #44082]	Enrichment culture duration	7 days
[Ref.: #44082]	Enrichment culture temperature	37 ̊C

[Ref.: #64984]	Sample type/isolated from	marine solar saltern
[Ref.: #64984]	Geographic location (country and/or sea, region)	Marine Saltern of Wendeng (36° 57' 56.49'' N, 122° 0' 38.85'' E)
[Ref.: #64984]	Country	China
[Ref.: #64984]	Country ISO 3 Code	CHN
[Ref.: #64984]	Continent	Asia
[Ref.: #64984]	Geographic location	36.9657°/122.0110°

[Ref.: #67771]	Sample type/isolated from	From marine solar saltern, Marine Saltern of Wendeng
[Ref.: #67771]	Country	China
[Ref.: #67771]	Country ISO 3 Code	CHN
[Ref.: #67771]	Continent	Asia
[Ref.: #67771]	Geographic location	36.9657°/122.0110°
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	#Marine
#Condition	#Saline	-
#Engineered	#Industrial	#Industrial production
#Environmental	#Terrestrial	#Coast

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence KX815123 (>99% sequence identity) for Rhodosalinus sediminis subclade from Microbeatlas

Aquatic Samples	351
Soil Samples	32
Animal Samples	24
Plant Samples	2
Total Samples	409

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #64984]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #64984]	Rhodosalinus sediminis strain WDN1C137 16S ribosomal RNA gene, partial sequence	KX815123	1388	ENA	1940533 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Rhodosalinus sediminis WDN1C137	GCA_003385555	scaffold	GenBank	1940533 tax ID	*
[Ref.: #66792]	Rhodosalinus sediminis WDN1C137	2831947122	draft	JGI IMG/M	1940533 tax ID	*

[Ref.: #44082]

GC-content

70.9 mol%

high performance liquid chromatography (HPLC)

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Rhodosalinus sediminis WDN1C137 NCBI: GCA_003385555.1
[Ref.: #69481]	spore-forming	no	89	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Rhodosalinus sediminis WDN1C137 NCBI: GCA_003385555.1
[Ref.: #69480]	motile	yes	72.618	yes
[Ref.: #69480]	flagellated	no	79.19	no
[Ref.: #69480]	gram-positive	no	98.422	yes
[Ref.: #69480]	anaerobic	no	94.434	yes
[Ref.: #69480]	aerobic	yes	65.563	no
[Ref.: #69480]	halophile	yes	90.397	no
[Ref.: #69480]	spore-forming	no	96.834	no
[Ref.: #69480]	glucose-util	no	67.666	yes
[Ref.: #69480]	thermophile	no	74.238	no
[Ref.: #69480]	glucose-ferment	no	89.23	no

Availability in culture collections External links

[Ref.: #64984]

Culture collection no.

KCTC 52478, MCCC 1H00170, DSM 108746

[Ref.: #96873]

SI-ID 406152

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Rhodosalinus sediminis gen. nov., sp. nov., isolated from marine saltern.	Guo LY, Ling SK, Li CM, Chen GJ, Du ZJ	Int J Syst Evol Microbiol	10.1099/ijsem.0.002424	2017	*
Phylogeny	Rhodosalinus halophilus sp. nov., isolated from a marine solar saltern, and emended description of the genus Rhodosalinus.	Liu ZW, Wang TJ, Yang H, Lu DC, Du ZJ	Int J Syst Evol Microbiol	10.1099/ijsem.0.003646	2019	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#44082

Ling-Yun Guo, Si-Kai Ling, Chang-Ming Li, Guan-Jun Chen and Zong-Jun Du: Rhodosalinus sediminis gen. nov., sp. nov., isolated from marine saltern. IJSEM 67: 5108 - 5113 2017 ( DOI 10.1099/ijsem.0.002424 , PubMed 29043957 )

#64984

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 108746

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#66794

Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 )

#67771 Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;

#68369

Automatically annotated from API 20NE .

#68382

Automatically annotated from API zym .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#96873

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID406152.1 )

* These data were automatically processed and therefore are not curated

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