Name: Flavobacterium paronense KNUS1
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 141134

Type strain:

Species: Flavobacterium paronense

Strain Designation: KNUS1

Culture col. no.: KACC 17692, CECT 8460

NCBI tax ID(s): 1392775 (species)

Special Collections

Literature strains

Section

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Flavobacterium paronense KNUS1 is an obligate aerobe, Gram-negative, motile bacterium that forms circular colonies and was isolated from freshwater near a floating vegetated island from a lake.

colony-forming
Gram-negative
motile
rod-shaped
obligate aerobe
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	09-12-2024 (DD-MM-YYYY)
	Domain	*Bacteria*
	Phylum	*Bacteroidota*
	Class	*Flavobacteriia*
	Order	*Flavobacteriales*
	Family	*Flavobacteriaceae*
	Genus	*Flavobacterium*
	Species	**Flavobacterium paronense**
	Full Scientific Name (LPSN)	Flavobacterium paronense Joung et al. 2016

Information on morphological and physiological properties Morphology

[Ref.: #44049]	Gram stain	negative

[Ref.: #44049]	Cell shape	rod-shaped

[Ref.: #44049]	Motility	yes

[Ref.: #44049]	Flagellum arrangement	gliding

[Ref.: #44049]	Colony size	5 mm
[Ref.: #44049]	Colony color	dark yellow
[Ref.: #44049]	Colony shape	circular
[Ref.: #44049]	Incubation period	2 days
[Ref.: #44049]	Cultivation medium used	R2A agar

[Ref.: #44049]	Pigment production	yes
[Ref.: #44049]	Pigment name	flexirubin-type
[Ref.: #44049]	Pigment production	no
[Ref.: #44049]	Pigment name	brown pigments

Information on culture and growth conditions Culture and growth conditions

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Culture medium

Reasoner's 2A agar (R2A)

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Culture medium growth

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Culture medium

Blood Agar

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Culture medium growth

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Culture medium

Marine agar (MA)

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Culture medium growth

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Culture medium

MacConkey

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Culture medium growth

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Culture medium

Nutrient agar (NA)

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Culture medium growth

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Culture medium

Trypticase Soy Agar (TSA)

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Culture medium growth

	Temperatures	Kind of temperature		Temperature
[Ref.: #44049]			growth	10-30 °C
[Ref.: #44049]			optimum	25 °C

	pH	Kind of pH		pH
[Ref.: #44049]			optimum	8
[Ref.: #44049]			growth	7-8

Information on physiology and metabolism Physiology and metabolism

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Oxygen tolerance

obligate aerobe

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #44049]		NaCl		growth	0-1.0	%(w/v)
[Ref.: #44049]		NaCl		optimum	1	%(w/v)

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #44049]	adipate ChEBI	-	assimilation
[Ref.: #44049]	carboxymethylcellulose ChEBI	-	hydrolysis
[Ref.: #44049]	casein	-	hydrolysis
[Ref.: #44049]	cellulose ChEBI	-	hydrolysis
[Ref.: #44049]	chitin ChEBI	-	hydrolysis
[Ref.: #44049]	D-glucose ChEBI	-	assimilation
[Ref.: #44049]	D-mannitol ChEBI	-	assimilation
[Ref.: #44049]	D-mannose ChEBI	-	assimilation
[Ref.: #44049]	decanoate ChEBI	-	assimilation
[Ref.: #44049]	dextrin ChEBI	-	hydrolysis
[Ref.: #44049]	esculin ChEBI	+	hydrolysis
[Ref.: #44049]	L-arabinose ChEBI	-	assimilation
[Ref.: #44049]	malate ChEBI	-	assimilation
[Ref.: #44049]	maltose ChEBI	-	assimilation
[Ref.: #44049]	melibiose ChEBI	+	carbon source
[Ref.: #44049]	N-acetylglucosamine ChEBI	-	assimilation
[Ref.: #44049]	phenylacetate ChEBI	-	assimilation
[Ref.: #44049]	potassium gluconate ChEBI	-	assimilation
[Ref.: #44049]	sodium citrate ChEBI	-	assimilation
[Ref.: #44049]	starch ChEBI	-	hydrolysis
	Only first 10 entries are displayed. Click here to see all.

	Metabolite production	Metabolite	Production
[Ref.: #44049]		hydrogen sulfide ChEBI	no

	Enzyme	Enzyme activity	EC number
[Ref.: #44049]	acid phosphatase	+	3.1.3.2
[Ref.: #44049]	alkaline phosphatase	+	3.1.3.1
[Ref.: #44049]	alpha-chymotrypsin	-	3.4.21.1
[Ref.: #44049]	alpha-fucosidase	-	3.2.1.51
[Ref.: #44049]	alpha-galactosidase	-	3.2.1.22
[Ref.: #44049]	alpha-glucosidase	-	3.2.1.20
[Ref.: #44049]	alpha-mannosidase	-	3.2.1.24
[Ref.: #44049]	beta-galactosidase	-	3.2.1.23
[Ref.: #44049]	beta-glucosidase	-	3.2.1.21
[Ref.: #44049]	beta-glucuronidase	-	3.2.1.31
[Ref.: #44049]	catalase	+	1.11.1.6
[Ref.: #44049]	cystine arylamidase	+	3.4.11.3
[Ref.: #44049]	cytochrome oxidase	+	1.9.3.1
[Ref.: #44049]	DNase	-
[Ref.: #44049]	esterase (C 4)	-
[Ref.: #44049]	esterase Lipase (C 8)	+
[Ref.: #44049]	leucine arylamidase	+	3.4.11.1
[Ref.: #44049]	lipase (C 14)	-
[Ref.: #44049]	N-acetyl-beta-glucosaminidase	-	3.2.1.52
[Ref.: #44049]	naphthol-AS-BI-phosphohydrolase	+
[Ref.: #44049]	trypsin	+	3.4.21.4
[Ref.: #44049]	valine arylamidase	+
	Only first 10 entries are displayed. Click here to see all.

Fatty acid profile

Metadata FA analysis

Reference

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Fatty acid	Percentage
C15:0 iso	22.9
iso-C15:1-G	21.1
iso-C17:0-3-OH	9.7
C15:0 iso 3OH	9.1
C15:1ω6c	6.8
C16:0-10-methyl / iso-C17:1ω9c	5.5
C15:0 anteiso	5.4
C16:1ω6c / C16:1ω7c	3
iso-C16:1-H	2.3
C16:0 iso	1.7
C17:1ω6c	1.6
C17:1 anteiso ω9c	1.2
anteiso-C15:1-A	1.2

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #44049]	Sample type/isolated from	freshwater near a floating vegetated island from a lake
[Ref.: #44049]	Geographic location (country and/or sea, region)	Lake Paro
[Ref.: #44049]	Country	Republic of Korea
[Ref.: #44049]	Country ISO 3 Code	KOR
[Ref.: #44049]	Continent	Asia
[Ref.: #44049]	Geographic location	38.0983°/127.7750°
[Ref.: #44049]	Enrichment culture	R2A
[Ref.: #44049]	Enrichment culture duration	2 days
[Ref.: #44049]	Enrichment culture temperature	20 ̊C
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	#Freshwater
#Environmental	#Aquatic	#Lake (large)

What are isolation sources categories?

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #44049]	Flavobacterium paronense 16S ribosomal RNA gene, partial sequence	KF499995		GenBank ENA

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GC-content

34.2 mol%

Thermal denaturation, fluorometry

Availability in culture collections External links

[Ref.: #44049]

Culture collection no.

KACC 17692, CECT 8460

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Flavobacterium paronense sp. nov., isolated from freshwater of an artificial vegetated island.	Joung Y, Kang H, Kim H, Kim TS, Han JH, Kim SB, Ahn TS, Joh K	Int J Syst Evol Microbiol	10.1099/ijsem.0.000727	2015	*
Phylogeny	Flavobacterium sangjuense sp. nov. isolated from sediment.	Kim H, Heo SY, Kim JH, Chae JC, Yu SM	Antonie Van Leeuwenhoek	10.1007/s10482-019-01297-1	2019	*
Phylogeny	Flavobacterium knui sp. nov., a novel member of the family Flavobacteriaceae.	Kim SY, Ten LN, Lee SY, Kim SH, Kang IK, Jung HY	Antonie Van Leeuwenhoek	10.1007/s10482-018-1128-3	2018	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#44049

Yochan Joung, Heeyoung Kang, Haneul Kim, Tae-Su Kim, Ji-Hye Han, Seung Bum Kim, Tae-Seok Ahn and Kiseong Joh: Flavobacterium paronense sp. nov., isolated from freshwater of an artificial vegetated island. IJSEM 66: 365 - 370 2016 ( DOI 10.1099/ijsem.0.000727 , PubMed 26530258 )

* These data were automatically processed and therefore are not curated

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