Name: Streptomyces odonnellii 594
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 141109

Type strain:

Species: Streptomyces odonnellii

Strain Designation: 594

Culture col. no.: IMPPG 594, DSM 41949, NRRL B-24891

Strain history: <- R. Fonseca de Souza,Brasil; 594 <- A. A. Linhares

NCBI tax ID(s): 1417980 (species)

Section

Streptomyces odonnellii 594 is an aerobe, spore-forming, mesophilic bacterium that builds a substrate mycelium and was isolated from a dark-reddish latosol under natural vegetation cover .

Gram-positive
spore-forming
aerobe
mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	07-12-2022 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	Streptomycetales
	Family	Streptomycetaceae
	Genus	*Streptomyces*
	Species	**Streptomyces odonnellii**
	Full Scientific Name (PNU)	Streptomyces odonnellii Pereira et al. 2017

Information on morphological and physiological properties Morphology

[Ref.: #44017]	Gram stain	positive
[Ref.: #44017]	Motility	no

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Pigment production

[Ref.: #44017]	Multicellular complex forming ability	yes
[Ref.: #44017]	Multicellular complex name	substrate mycelium
[Ref.: #44017]	Multicellular complex color	yellowish brown

[Ref.: #44017]	Multicellular complex forming ability	yes
[Ref.: #44017]	Multicellular complex name	aerial mycelium
[Ref.: #44017]	Multicellular complex color	white

Multimedia content

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Caption:

Medium 987 228°C

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Intellectual property rights:

Information on culture and growth conditions Culture and growth conditions

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Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

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Culture medium growth

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Culture medium link

Medium recipe provided by DSMZ

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Culture medium composition

expand / minimize

	Kind of temperature		Temperature
[Ref.: #44017]		growth	28 °C
[Ref.: #44017]	no	growth	45 °C
[Ref.: #64882]		growth	28 °C

[Ref.: #44017]	Temperature range	mesophilic
[Ref.: #44017]	Temperature range	thermophilic
[Ref.: #64882]	Temperature range	mesophilic

	pH	Kind of pH		pH	pH range
[Ref.: #44017]			growth	4.3

Information on physiology and metabolism Physiology and metabolism

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Oxygen tolerance

aerobe

[Ref.: #44017]	Spore description	spiral chains of spiny-surfaced spores
[Ref.: #44017]	Type of spore	spore
[Ref.: #44017]	Ability of spore formation	yes

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #44017]		NaCl	no	growth	4	%

[Ref.: #44017]	Observation	grows well on ISP (International Streptomyces Projec)-2, ISP-4, ISP-5 and Czapek's agar media
[Ref.: #44017]	Observation	melanin production is observed on tyrosine agar but not on peptone/yeast extract/iron agar
[Ref.: #44017]	Observation	grows in the presence of crystal violet (0.0001 %)
[Ref.: #44017]	Observation	grows not in the presence of sodium azide (0.1 %), phenol (0.1 %)
[Ref.: #44017]	Observation	colour of the substrate and aerial mycelium is not sensitive to pH

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #44017]	4-hydroxy-L-proline ChEBI	+	nitrogen source
[Ref.: #44017]	allantoin ChEBI	-	assimilation
[Ref.: #44017]	arbutin ChEBI	+	assimilation
[Ref.: #44017]	arginine ChEBI	-	nitrogen source
[Ref.: #44017]	cellobiose ChEBI	+	carbon source
[Ref.: #44017]	chitin ChEBI	+	assimilation
[Ref.: #44017]	cysteine ChEBI	-	nitrogen source
[Ref.: #44017]	D-fructose ChEBI	+	carbon source
[Ref.: #44017]	D-galactose ChEBI	+	carbon source
[Ref.: #44017]	D-glucose ChEBI	+	carbon source
[Ref.: #44017]	D-mannose ChEBI	+	carbon source
[Ref.: #44017]	D-xylose ChEBI	+	carbon source
[Ref.: #44017]	dextran ChEBI	-	carbon source
[Ref.: #44017]	elastin ChEBI	+	assimilation
[Ref.: #44017]	gelatin ChEBI	+	assimilation
[Ref.: #44017]	guanine ChEBI	-	assimilation
[Ref.: #44017]	hypoxanthine ChEBI	+	assimilation
[Ref.: #44017]	inulin ChEBI	+	carbon source
[Ref.: #44017]	L-arabinose ChEBI	+	carbon source
[Ref.: #44017]	L-asparagine ChEBI	+	nitrogen source
[Ref.: #44017]	L-methionine ChEBI	-	nitrogen source
[Ref.: #44017]	L-phenylalanine ChEBI	+	nitrogen source
[Ref.: #44017]	L-rhamnose ChEBI	+	carbon source
[Ref.: #44017]	L-serine ChEBI	+	nitrogen source
[Ref.: #44017]	L-tyrosine ChEBI	+	assimilation
[Ref.: #44017]	L-valine ChEBI	+	nitrogen source
[Ref.: #44017]	lactose ChEBI	+	carbon source
[Ref.: #44017]	mannitol ChEBI	+	carbon source
[Ref.: #44017]	melibiose ChEBI	+	carbon source
[Ref.: #44017]	myo-inositol ChEBI	-	carbon source
[Ref.: #44017]	nitrate ChEBI	-	reduction
[Ref.: #44017]	pectin ChEBI	-	assimilation
[Ref.: #44017]	raffinose ChEBI	+	carbon source
[Ref.: #44017]	ribitol ChEBI	-	carbon source
[Ref.: #44017]	salicin ChEBI	+	carbon source
[Ref.: #44017]	sodium acetate ChEBI	+	carbon source
[Ref.: #44017]	sodium citrate ChEBI	+	carbon source
[Ref.: #44017]	starch ChEBI	+	assimilation
[Ref.: #44017]	sucrose ChEBI	+	carbon source
[Ref.: #44017]	trehalose ChEBI	+	carbon source
[Ref.: #44017]	urea ChEBI	-	assimilation
[Ref.: #44017]	xanthine ChEBI	-	assimilation
[Ref.: #44017]	xylan ChEBI	+	assimilation
[Ref.: #44017]	xylitol ChEBI	-	carbon source
	Only first 10 entries are displayed. Click here to see all.

	Metabolite	Antibiotic sensitivity	Antibiotic resistance
[Ref.: #44017]	gentamicin ChEBI	yes
[Ref.: #44017]	neomycin ChEBI	yes
[Ref.: #44017]	penicillin g ChEBI		yes
[Ref.: #44017]	streptomycin ChEBI	yes
[Ref.: #44017]	vancomycin ChEBI		yes

	Metabolite production	Metabolite
[Ref.: #44017]		sulfide ChEBI

	Enzymes	Enzyme	Enzyme activity	EC number
[Ref.: #44017]		catalase	+	1.11.1.6

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #44017]	Sample type/isolated from	a dark-reddish latosol under natural vegetation cover (cerrado = savanna vegetation)
[Ref.: #44017]	Country	Brazil
[Ref.: #44017]	Country ISO 3 Code	BRA
[Ref.: #44017]	Continent	Middle and South America

[Ref.: #64882]	Sample type/isolated from	dark-reddish soil (latosol) under cerrado (savanna) vegetation cover
[Ref.: #64882]	Country	Brazil
[Ref.: #64882]	Country ISO 3 Code	BRA
[Ref.: #64882]	Continent	Middle and South America
* marker position based on {}

Isolation sources categories

#Climate	#Hot	#Tropical
#Environmental	#Terrestrial	#Soil

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

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Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #64882]	Streptomyces odonnellii strain 594 16S ribosomal RNA gene, partial sequence	EU621880	1427	ENA	1417980 tax ID

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GC-content

70.4 mol%

sequence analysis

Availability in culture collections External links

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Culture collection no.

IMPPG 594, DSM 41949, NRRL B-24891

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Streptomyces odonnellii sp. nov., a proteolytic streptomycete isolated from soil under cerrado (savanna) vegetation cover.	Pereira PHF, Macrae A, Reinert F, de Souza RF, Coelho RRR, Potter G, Klenk HP, Labeda DP	Int J Syst Evol Microbiol	10.1099/ijsem.0.002446	2017	*
Phylogeny	Streptomyces corynorhini sp. nov., isolated from Townsend's big-eared bats (Corynorhinus townsendii).	Hamm PS, Caimi NA, Northup DE, Valdez EW, Buecher DC, Dunlap CA, Labeda DP, Porras-Alfaro A	Antonie Van Leeuwenhoek	10.1007/s10482-019-01261-z	2019	*
Phylogeny	Streptomyces paludis sp. nov., isolated from an alpine wetland soil.	Zhao J, Tang X, Li K, Guo Y, Feng M, Gao J	Int J Syst Evol Microbiol	10.1099/ijsem.0.003821	2020	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#44017

Pedro Henrique Freitas Pereira, Andrew Macrae, Fernanda Reinert, Rodrigo Fonseca de Souza, Rosalie Reed Rodrigues Coelho, Gabrielle Pötter, Hans-Peter Klenk, David P. Labeda: Streptomyces odonnellii sp. nov., a proteolytic streptomycete isolated from soil under cerrado (savanna) vegetation cover. IJSEM 67: 5211 - 5215 2017 ( DOI 10.1099/ijsem.0.002446 , PubMed 29087276 )

#64882

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 41949

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

* These data were automatically processed and therefore are not curated

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