Pseudofulvibacter gastropodicola (KCCM 43046, JCM 30369, MEBiC 08749)

Name: Pseudofulvibacter gastropodicola (KCCM 43046, JCM 30369, MEBiC 08749)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 141090

Type strain

Culture col. no. KCCM 43046 JCM 30369 MEBiC 08749

NCBI tax ID(s) 1524960

Special Collections JCM Literature strains

History K. K. Kwon; Korea Inst. of Ocean Sci. & Technol., South Korea; MEBiC08749.

Links

Pseudofulvibacter gastropodicola KCCM 43046 is an aerobe, Gram-negative, rod-shaped bacterium that forms circular colonies and was isolated from marine conch.

Gram-negative rod-shaped colony-forming aerobe 16S sequence Bacteria

Name and taxonomic classification

SI-ID 132139

JCM 30369,JCM31589

@ref 20215

Last LPSN update 2026-02-09 11:33:48

Domain Bacteria

Phylum Bacteroidota

Class Flavobacteriia

Order Flavobacteriales

Family Flavobacteriaceae

Genus Pseudofulvibacter

Species Pseudofulvibacter gastropodicola

Full scientific name Pseudofulvibacter gastropodicola Yang et al. 2016

Morphology

Cell morphology

@ref	Gram stain	Cell length	Cell width	Cell shape	Motility
43997	negative	1.8-2.3 µm	0.4-0.6 µm	rod-shaped

Colony morphology

@ref	Colony color	Colony shape	Medium used	Colony size	Incubation period
43997	yellow	circular	solid marine agar 2216
43997				0.5-1.0 mm
43997					2-3 days

Culture and growth conditions

Culture medium

@ref	Name	Growth
43997	solid marine agar 2216

Culture temp

@ref	Growth	Type	Temperature (°C)
43997	positive	optimum	25
43997	positive	growth	5-31
67770	positive	growth	25

Culture pH

@ref	Ability	Type	PH	PH range
43997	positive	optimum	7.5
43997	positive	growth	6.0-8.5	alkaliphile

Physiology and metabolism

Oxygen tolerance

43997

Oxygen toleranceaerobe

Halophily

@ref	Salt	Growth	Tested relation	Concentration
43997	NaCl	positive	growth	0-6.0 %
43997	NaCl	positive	optimum	2.5 %

Observation

67770

Observationquinones: MK-6

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
43997	37054 ChEBI	3-hydroxybutyrate	+	oxidation
43997	30089 ChEBI	acetate	+	oxidation
43997	17925 ChEBI	alpha-D-glucose	+	oxidation
43997	16383 ChEBI	cis-aconitate	+	oxidation
43997	16947 ChEBI	citrate	+	oxidation
43997	15570 ChEBI	D-alanine	+	oxidation
43997	18333 ChEBI	D-arabitol	+	oxidation
43997	15824 ChEBI	D-fructose	+	oxidation
43997	30612 ChEBI	D-glucarate	+	oxidation
43997	8391 ChEBI	D-gluconate	+	oxidation
43997	16899 ChEBI	D-mannitol	+	oxidation
43997	16024 ChEBI	D-mannose	+	oxidation
43997	15740 ChEBI	formate	+	oxidation
43997	16865 ChEBI	gamma-aminobutyric acid	+	oxidation
43997	21217 ChEBI	L-alaninamide	+	oxidation
43997	16977 ChEBI	L-alanine	+	oxidation
43997	30849 ChEBI	L-arabinose	+	oxidation
43997	17196 ChEBI	L-asparagine	+	oxidation
43997	29991 ChEBI	L-aspartate	+	oxidation
43997	29985 ChEBI	L-glutamate	+	oxidation
43997	17203 ChEBI	L-proline	+	oxidation
43997	17115 ChEBI	L-serine	+	oxidation
43997	24996 ChEBI	lactate	+	oxidation
43997	51850 ChEBI	methyl pyruvate	+	oxidation
43997	75146 ChEBI	monomethyl succinate	+	oxidation
43997	17632 ChEBI	nitrate	-	reduction
43997	17272 ChEBI	propionate	+	oxidation
43997	17148 ChEBI	putrescine	+	oxidation
43997	26490 ChEBI	quinate	+	oxidation
43997	28017 ChEBI	starch	-	degradation
43997	143136 ChEBI	succinamate	+	oxidation
43997	53423 ChEBI	tween 40	+	oxidation
43997	53426 ChEBI	tween 80	+	oxidation

Metabolite production

@ref	Chebi-ID	Metabolite	Production
43997	15688 ChEBI	acetoin

Enzymes

@ref	Value	Activity	Ec
43997	acid phosphatase	+	3.1.3.2
43997	alkaline phosphatase	+	3.1.3.1
43997	catalase	+	1.11.1.6
43997	cystine arylamidase	+	3.4.11.3
43997	cytochrome oxidase	+	1.9.3.1
43997	esterase (C 4)	+
43997	esterase Lipase (C 8)	+
43997	gelatinase	+
43997	leucine arylamidase	+	3.4.11.1
43997	naphthol-AS-BI-phosphohydrolase	+
43997	trypsin	+	3.4.21.4
43997	valine arylamidase	+

Fatty acid profile

Metadata FA analysis

@ref

43997

Fatty acid	Percentage
C15:0 iso	28.5
C17:0 iso 3OH	16.4
10-methyl C16:0 and/or iso-C17:1ω9c	9.7
C16:1ω6c and/or C16:1ω7c	9.5
C15:1 iso G	9.1
C15:0 iso 3OH	6.8
C16:0 3OH	4.7
C13:1at12-13	4.1
C14:0	2.4
C16:0	1.9
C13:0 iso	1.8
C16:0 iso 3OH	1.2

Isolation, sampling and environmental information

Isolation source categories

Cat1
#Host

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent	Latitude	Longitude
43997	marine conch	Samcheok Port in the East Sea, Sea of Japan	Republic of Korea	KOR	Asia	36.0796	129.194 36.0796/129.194
67770	Marine conch collected at Samcheok Port		Republic of Korea	KOR	Asia

Interaction and safety

Sequence information

16S sequences

@ref	Description	Accession	Database
43997	Pseudofulvibacter gastropodicola 16S ribosomal RNA gene, partial sequence	KJ918743

GC content

@ref	GC-content (mol%)	Method
43997	30	high performance liquid chromatography (HPLC)

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Pseudofulvibacter gastropodicola sp. nov., isolated from a marine conch and emended descriptions of the genus Pseudofulvibacter Yoon et al. 2013 and Pseudofulvibacter geojedonensis.	Yang SH, Seo HS, Lee JH, Kim SJ, Kyoung Kwon K	Int J Syst Evol Microbiol	10.1099/ijsem.0.000734	2015

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#43997	Sung-Hyun Yang, Hyun-Seok Seo, Jung-Hyun Lee, Sang-Jin Kim, Kae Kyoung Kwon: Pseudofulvibacter gastropodicola sp. nov., isolated from a marine conch and emended descriptions of the genus Pseudofulvibacter Yoon et al. 2013 and Pseudofulvibacter geojedonensis. IJSEM 66: 430 - 434 2016 ( DOI 10.1099/ijsem.0.000734 , PubMed 26537663 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Pseudofulvibacter gastropodicola (KCCM 43046, JCM 30369, MEBiC 08749)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Culture and growth conditions

Culture medium

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Halophily

Observation

Metabolite utilization

Metabolite production

Enzymes

Fatty acid profile

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Sequence information

16S sequences

GC content

Genome-based predictions

Literature

Literature

References

BacDive

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