Name: Caballeronia temeraria R-50715
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 141026

Type strain:

Species: Caballeronia temeraria

Strain Designation: R-50715

Culture col. no.: LMG 29319, CCUG 68410, CIP 111003

Strain history: CIP <- 2016, P. Vandamme, Gent Univ., Gent, Belgium: strain R-50715

NCBI tax ID(s): 1777137 (species)

SI-ID 409674

CCUG 68410

Section

Caballeronia temeraria R-50715 is an aerobe, mesophilic, Gram-negative bacterium that was isolated from Rhizosphere soil.

Gram-negative
aerobe
mesophilic
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Betaproteobacteria*
	Order	*Burkholderiales*
	Family	*Burkholderiaceae*
	Genus	*Caballeronia*
	Species	**Caballeronia temeraria**
	Full Scientific Name (LPSN)	Caballeronia temeraria (Peeters et al. 2016) Dobritsa et al. 2017

Synonym

Burkholderia temeraria

Information on morphological and physiological properties Morphology

[Ref.: #123439]	Gram stain	negative
[Ref.: #69480]	Gram stain	negative Confidence in %99.965

[Ref.: #123439]	Cell shape	rod-shaped

[Ref.: #123439]	Motility	no

Information on culture and growth conditions Culture and growth conditions

[Ref.: #123439]

Culture medium

CIP Medium 72

[Ref.: #123439]

Culture medium growth

[Ref.: #123439]

Culture medium link

Medium recipe provided by DSMZ

	Temperatures	Kind of temperature		Temperature
[Ref.: #63479]			growth	30 °C

[Ref.: #63479]

Temperature range

mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #63479]

Oxygen tolerance

aerobe

[Ref.: #69481]	Ability of spore formation	no Confidence in %100
[Ref.: #69480]	Ability of spore formation	no Confidence in %99.981

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #63479]	Sample type/isolated from	Rhizosphere soil
[Ref.: #63479]	Sampling date	2013
[Ref.: #63479]	Country	South Africa
[Ref.: #63479]	Country ISO 3 Code	ZAF
[Ref.: #63479]	Continent	Africa

[Ref.: #123439]	Sample type/isolated from	Environment, Rhizosphere soil
[Ref.: #123439]	Country	South Africa
[Ref.: #123439]	Country ISO 3 Code	ZAF
[Ref.: #123439]	Continent	Africa
[Ref.: #123439]	Isolation date	2013-01-02
* marker position based on {}

Isolation sources categories

#Environmental	#Terrestrial	#Soil
#Host Body-Site	#Plant	#Rhizosphere
#Host	#Plants	-

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #123439]

Biosafety level

Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Caballeronia temeraria LMG 29319	GCA_001544795	contig	GenBank	1777137 tax ID	*
[Ref.: #66792]	Burkholderia sp. strain LMG 29319	36773.26	wgs	PATRIC	36773 tax ID	*
[Ref.: #66792]	Caballeronia temeraria LMG 29319	2713896995	draft	JGI IMG/M	1777137 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Burkholderia sp. strain LMG 29319 PATRIC: 36773.26
[Ref.: #69481]	spore-forming	no	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Burkholderia sp. strain LMG 29319 PATRIC: 36773.26
[Ref.: #69480]	gram-positive	no	97.858	no
[Ref.: #69480]	anaerobic	no	98.158	no
[Ref.: #69480]	halophile	no	94.452	no
[Ref.: #69480]	spore-forming	no	92.577	no
[Ref.: #69480]	glucose-util	yes	87.127	no
[Ref.: #69480]	aerobic	yes	88.63	yes
[Ref.: #69480]	motile	yes	87.284	no
[Ref.: #69480]	flagellated	no	79.283	no
[Ref.: #69480]	thermophile	no	99.482	yes
[Ref.: #69480]	glucose-ferment	no	89.695	no

Availability in culture collections External links

[Ref.: #43568]

Culture collection no.

LMG 29319, CCUG 68410, CIP 111003

[Ref.: #96840]

SI-ID 409674

Literature:

	Title	Authors	Journal	DOI	Year
	Phylogenomic Study of Burkholderia glathei-like Organisms, Proposal of 13 Novel Burkholderia Species and Emended Descriptions of Burkholderia sordidicola, Burkholderia zhejiangensis, and Burkholderia grimmiae.	Peeters C, Meier-Kolthoff JP, Verheyde B, De Brandt E, Cooper VS, Vandamme P	Front Microbiol	10.3389/fmicb.2016.00877	2016	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#43568

Anatoly P. Dobritsa, Elena V. Linardopoulou, Mansour Samadpour: Transfer of 13 species of the genus Burkholderia to the genus Caballeronia and reclassification of Burkholderia jirisanensis as Paraburkholderia jirisanensis comb. nov.. IJSEM 67: 3846 - 3853 2017 ( DOI 10.1099/ijsem.0.002202 , PubMed 28879843 )

#63479 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 68410

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#96840

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID409674.1 )

#123439 Collection of Institut Pasteur ; Curators of the CIP; CIP 111003
* These data were automatically processed and therefore are not curated

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Burkholderia sp. strain LMG 29319

Burkholderia sp. strain LMG 29319

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