Name: Caballeronia fortuita LMG 29320
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 141020

Type strain:

Species: Caballeronia fortuita

Culture col. no.: LMG 29320, CCUG 68409

NCBI tax ID(s): 1777138 (species)

Section

Caballeronia fortuita LMG 29320 is an aerobe, mesophilic bacterium that was isolated from Rhizosphere soil.

aerobe
mesophilic
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	07-12-2022 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Betaproteobacteria*
	Order	*Burkholderiales*
	Family	*Burkholderiaceae*
	Genus	*Caballeronia*
	Species	**Caballeronia fortuita**
	Full Scientific Name (PNU)	Caballeronia fortuita (Peeters et al. 2016) Dobritsa et al. 2017

Synonym

Burkholderia fortuita

Information on morphological and physiological properties Morphology

[Ref.: #69480]

Gram stain

negative Confidence in %99.973

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #63478]			growth	30 °C

[Ref.: #63478]

Temperature range

mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #63478]

Oxygen tolerance

aerobe

[Ref.: #69481]	Ability of spore formation	no Confidence in %100
[Ref.: #69480]	Ability of spore formation	no Confidence in %99.992

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #63478]	Sample type/isolated from	Rhizosphere soil
[Ref.: #63478]	Sampling date	2013
[Ref.: #63478]	Country	South Africa
[Ref.: #63478]	Country ISO 3 Code	ZAF
[Ref.: #63478]	Continent	Africa
* marker position based on {}

Isolation sources categories

#Environmental	#Terrestrial	#Soil
#Host Body-Site	#Plant	#Rhizosphere
#Host	#Plants	-

What are isolation sources categories?

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Caballeronia fortuita LMG 29320	GCA_001544835	contig	GenBank	1777138 tax ID	*
[Ref.: #66792]	Burkholderia sp. strain LMG 29320	36773.27	wgs	PATRIC	36773 tax ID	*
[Ref.: #66792]	Caballeronia fortuita LMG 29320	2713896992	draft	JGI IMG/M	1777138 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Burkholderia sp. strain LMG 29320 PATRIC: 36773.27
[Ref.: #69480]	gram-positive	no	99.973	yes
[Ref.: #69480]	anaerobic	no	99.484	no
[Ref.: #69480]	spore-forming	no	99.992	yes
[Ref.: #69480]	thermophile	no	99.909	yes
[Ref.: #69480]	motile	yes	87.34	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Burkholderia sp. strain LMG 29320 PATRIC: 36773.27
[Ref.: #69481]	spore-forming	no	100	no

Availability in culture collections External links

[Ref.: #43568]

Culture collection no.

LMG 29320, CCUG 68409

Literature:

	Title	Authors	Journal	DOI	Year
	Phylogenomic Study of Burkholderia glathei-like Organisms, Proposal of 13 Novel Burkholderia Species and Emended Descriptions of Burkholderia sordidicola, Burkholderia zhejiangensis, and Burkholderia grimmiae.	Peeters C, Meier-Kolthoff JP, Verheyde B, De Brandt E, Cooper VS, Vandamme P	Front Microbiol	10.3389/fmicb.2016.00877	2016	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#43568

Anatoly P. Dobritsa, Elena V. Linardopoulou, Mansour Samadpour: Transfer of 13 species of the genus Burkholderia to the genus Caballeronia and reclassification of Burkholderia jirisanensis as Paraburkholderia jirisanensis comb. nov.. IJSEM 67: 3846 - 3853 2017 ( DOI 10.1099/ijsem.0.002202 , PubMed 28879843 )

#63478 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 68409

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

* These data were automatically processed and therefore are not curated

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Burkholderia sp. strain LMG 29320

Burkholderia sp. strain LMG 29320

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