Name: Niallia endozanthoxylica 1404
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 141013

Type strain:

Species: Niallia endozanthoxylica

Strain Designation: 1404

Culture col. no.: CCTCC AB 2017021, KCTC 33827, DSM 100730

Strain history: <- Li Ma, Yunnan Univ., China

NCBI tax ID(s): 2036016 (species)

Section

Niallia endozanthoxylica 1404 is an aerobe, Gram-positive, motile bacterium that forms irregular colonies and was isolated from surface-disinfected inner leaves of Chinese red pepper , Longnan County, Gansu, north-west China.

colony-forming
Gram-positive
motile
rod-shaped
aerobe
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Caryophanales*
	Family	*Bacillaceae*
	Genus	*Niallia*
	Species	**Niallia endozanthoxylica**
	Full Scientific Name (LPSN)	Niallia endozanthoxylica (Ma et al. 2017) Gupta et al. 2020

Synonym

Bacillus endozanthoxylicus

Information on morphological and physiological properties Morphology

[Ref.: #43909]	Gram stain	positive
[Ref.: #67771]	Gram stain	positive

[Ref.: #43909]	Cell length	1.7-3.2 µm

[Ref.: #43909]	Cell width	1.3-1.8 µm

[Ref.: #43909]	Cell shape	rod-shaped
[Ref.: #67771]	Cell shape	rod-shaped

[Ref.: #43909]	Motility	yes
[Ref.: #67771]	Motility	yes

[Ref.: #43909]	Flagellum arrangement	peritrichous
[Ref.: #67771]	Flagellum arrangement	peritrichous

[Ref.: #43909]	Colony color	pale yellow
[Ref.: #43909]	Colony shape	irregular
[Ref.: #43909]	Incubation period	2 days
[Ref.: #43909]	Cultivation medium used	Nutrient agar

Information on culture and growth conditions Culture and growth conditions

[Ref.: #43909]

Culture medium

Nutrient agar (NA)

[Ref.: #43909]

Culture medium growth

		Temperature
[Ref.: #43909]	growth	15-45 °C
[Ref.: #43909]	optimum	32 °C
[Ref.: #67771]	growth	32 °C

[Ref.: #43909]	Temperature range	mesophilic
[Ref.: #67771]	Temperature range	mesophilic

	pH	Kind of pH		pH
[Ref.: #43909]			optimum	6.0-7.0
[Ref.: #43909]			growth	6.0-10.0

Information on physiology and metabolism Physiology and metabolism

[Ref.: #43909]	Oxygen tolerance	aerobe
[Ref.: #67771]	Oxygen tolerance	aerobe

[Ref.: #43909]

Ability of spore formation

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #43909]		NaCl		growth	0-5	%(w/v)
[Ref.: #43909]		NaCl		optimum	0-1	%(w/v)

[Ref.: #43909]	Observation	quinone MK-7
[Ref.: #67771]	Observation	quinones: MK-7

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #43909]	(S)-lactate ChEBI	-	carbon source
[Ref.: #43909]	2-hydroxybutyrate ChEBI	+	carbon source
[Ref.: #43909]	2-oxobutanoate ChEBI	+	carbon source
[Ref.: #43909]	3-O-methyl-D-glucose ChEBI	+	carbon source
[Ref.: #43909]	acetate ChEBI	+	carbon source
[Ref.: #43909]	acetoacetate ChEBI	+	carbon source
[Ref.: #43909]	acetone ChEBI	+	carbon source
[Ref.: #43909]	adipate ChEBI	-	assimilation
[Ref.: #43909]	amygdalin ChEBI	+	builds acid from
[Ref.: #43909]	arbutin ChEBI	+	builds acid from
[Ref.: #43909]	beta-hydroxybutyrate ChEBI	+	carbon source
[Ref.: #43909]	bromosuccinate ChEBI	+	carbon source
[Ref.: #43909]	cellobiose ChEBI	+	builds acid from
[Ref.: #43909]	cellobiose ChEBI	+	carbon source
[Ref.: #43909]	citrate ChEBI	+	carbon source
[Ref.: #43909]	D-arabitol ChEBI	-	builds acid from
[Ref.: #43909]	D-aspartate ChEBI	+	carbon source
[Ref.: #43909]	D-fructose 6-phosphate ChEBI	+	carbon source
[Ref.: #43909]	D-fucose ChEBI	+	carbon source
[Ref.: #43909]	D-galactose ChEBI	+	carbon source
[Ref.: #43909]	D-galacturonic acid ChEBI	-	carbon source
[Ref.: #43909]	D-gluconate ChEBI	-	carbon source
[Ref.: #43909]	D-glucose ChEBI	+	fermentation
[Ref.: #43909]	D-glucose 6-phosphate ChEBI	-	carbon source
[Ref.: #43909]	D-glucuronate ChEBI	+	carbon source
[Ref.: #43909]	D-lyxose ChEBI	-	builds acid from
[Ref.: #43909]	D-malate ChEBI	+	carbon source
[Ref.: #43909]	D-mannitol ChEBI	-	carbon source
[Ref.: #43909]	D-saccharate ChEBI	+	carbon source
[Ref.: #43909]	D-serine ChEBI	+	carbon source
[Ref.: #43909]	D-sorbitol ChEBI	+	builds acid from
[Ref.: #43909]	D-tagatose ChEBI	+	builds acid from
[Ref.: #43909]	D-xylose ChEBI	+	builds acid from
[Ref.: #43909]	decanoate ChEBI	-	assimilation
[Ref.: #43909]	esculin ChEBI	+	builds acid from
[Ref.: #43909]	formate ChEBI	+	carbon source
[Ref.: #43909]	fructose ChEBI	+	builds acid from
[Ref.: #43909]	galactarate ChEBI	+	carbon source
[Ref.: #43909]	galactose ChEBI	+	builds acid from
[Ref.: #43909]	gamma-aminobutyric acid ChEBI	+	carbon source
[Ref.: #43909]	gamma-cyclodextrin ChEBI	+	carbon source
[Ref.: #43909]	gelatin ChEBI	-	carbon source
[Ref.: #43909]	gelatin ChEBI	+	hydrolysis
[Ref.: #43909]	gentiobiose ChEBI	-	carbon source
[Ref.: #43909]	gentiobiose ChEBI	+	builds acid from
[Ref.: #43909]	glucose ChEBI	+	builds acid from
[Ref.: #43909]	glucuronamide ChEBI	+	carbon source
[Ref.: #43909]	glycerol ChEBI	+	builds acid from
[Ref.: #43909]	glycerol ChEBI	+	carbon source
[Ref.: #43909]	glycine-proline ChEBI	+	carbon source
[Ref.: #43909]	glycogen ChEBI	+	builds acid from
[Ref.: #43909]	inosine ChEBI	+	carbon source
[Ref.: #43909]	inulin ChEBI	+	builds acid from
[Ref.: #43909]	L-arabinose ChEBI	+	builds acid from
[Ref.: #43909]	L-arabitol ChEBI	-	builds acid from
[Ref.: #43909]	L-arginine ChEBI	-	assimilation
[Ref.: #43909]	L-aspartate ChEBI	-	carbon source
[Ref.: #43909]	L-fucose ChEBI	+	carbon source
[Ref.: #43909]	L-galactonate ChEBI	+	carbon source
[Ref.: #43909]	L-glutamate ChEBI	+	carbon source
[Ref.: #43909]	L-histidine ChEBI	+	carbon source
[Ref.: #43909]	L-malate ChEBI	+	carbon source
[Ref.: #43909]	L-pyroglutamic acid ChEBI	+	carbon source
[Ref.: #43909]	L-rhamnose ChEBI	+	carbon source
[Ref.: #43909]	L-serine ChEBI	+	carbon source
[Ref.: #43909]	L-tryptophan ChEBI	-	assimilation
[Ref.: #43909]	lactose ChEBI	+	builds acid from
[Ref.: #43909]	lactose ChEBI	+	carbon source
[Ref.: #43909]	maltose ChEBI	+	builds acid from
[Ref.: #43909]	maltose hydrate	+	carbon source
[Ref.: #43909]	mannitol ChEBI	+	builds acid from
[Ref.: #43909]	mannose ChEBI	+	builds acid from
[Ref.: #43909]	melezitose ChEBI	+	builds acid from
[Ref.: #43909]	melibiose ChEBI	+	builds acid from
[Ref.: #43909]	methyl (R)-lactate ChEBI	+	carbon source
[Ref.: #43909]	methyl alpha-D-glucopyranoside ChEBI	+	builds acid from
[Ref.: #43909]	methyl alpha-D-mannoside ChEBI	+	builds acid from
[Ref.: #43909]	methyl beta-D-glucopyranoside ChEBI	-	carbon source
[Ref.: #43909]	methyl pyruvate ChEBI	+	carbon source
[Ref.: #43909]	myo-inositol ChEBI	+	builds acid from
[Ref.: #43909]	myo-inositol ChEBI	+	carbon source
[Ref.: #43909]	N-acetyl-D-mannosamine ChEBI	+	carbon source
[Ref.: #43909]	N-acetylglucosamine ChEBI	+	builds acid from
[Ref.: #43909]	N-acetylglucosamine ChEBI	+	carbon source
[Ref.: #43909]	n-acetylneuraminate ChEBI	+	carbon source
[Ref.: #43909]	nitrate ChEBI	+	reduction
[Ref.: #43909]	phenylacetate ChEBI	+	builds acid from
[Ref.: #43909]	potassium gluconate ChEBI	+	builds acid from
[Ref.: #43909]	potassium nitrate ChEBI	+	builds acid from
[Ref.: #43909]	propionate ChEBI	+	carbon source
[Ref.: #43909]	quinate ChEBI	+	carbon source
[Ref.: #43909]	raffinose ChEBI	+	builds acid from
[Ref.: #43909]	raffinose ChEBI	+	carbon source
[Ref.: #43909]	rhamnose ChEBI	-	builds acid from
[Ref.: #43909]	ribose ChEBI	+	builds acid from
[Ref.: #43909]	salicin ChEBI	+	builds acid from
[Ref.: #43909]	salicin ChEBI	+	carbon source
[Ref.: #43909]	sorbose ChEBI	-	builds acid from
[Ref.: #43909]	stachyose ChEBI	+	carbon source
[Ref.: #43909]	starch ChEBI	+	builds acid from
[Ref.: #43909]	sucrose ChEBI	+	builds acid from
[Ref.: #43909]	trehalose ChEBI	+	builds acid from
[Ref.: #43909]	trehalose ChEBI	+	carbon source
[Ref.: #43909]	turanose ChEBI	-	carbon source
[Ref.: #43909]	turanose ChEBI	+	builds acid from
[Ref.: #43909]	tween 40 ChEBI	-	carbon source
[Ref.: #43909]	urea ChEBI	-	hydrolysis
[Ref.: #43909]	xylitol ChEBI	-	builds acid from
[Ref.: #43909]	xylose ChEBI	-	builds acid from
	Only first 10 entries are displayed. Click here to see all.

	Enzyme	Enzyme activity	EC number
[Ref.: #43909]	acid phosphatase	+	3.1.3.2
[Ref.: #43909]	alkaline phosphatase	+	3.1.3.1
[Ref.: #43909]	alpha-chymotrypsin	+	3.4.21.1
[Ref.: #43909]	alpha-fucosidase	-	3.2.1.51
[Ref.: #43909]	alpha-galactosidase	+	3.2.1.22
[Ref.: #43909]	alpha-glucosidase	+	3.2.1.20
[Ref.: #43909]	alpha-mannosidase	-	3.2.1.24
[Ref.: #43909]	beta-galactosidase	+	3.2.1.23
[Ref.: #43909]	beta-glucosidase	+	3.2.1.21
[Ref.: #43909]	beta-glucuronidase	-	3.2.1.31
[Ref.: #43909]	cystine arylamidase	+	3.4.11.3
[Ref.: #43909]	esterase (C 4)	+
[Ref.: #43909]	esterase Lipase (C 8)	+
[Ref.: #43909]	leucine arylamidase	+	3.4.11.1
[Ref.: #43909]	lipase (C 14)	-
[Ref.: #43909]	N-acetyl-beta-glucosaminidase	-	3.2.1.52
[Ref.: #43909]	naphthol-AS-BI-phosphohydrolase	+
[Ref.: #43909]	trypsin	-	3.4.21.4
[Ref.: #43909]	valine arylamidase	+
	Only first 10 entries are displayed. Click here to see all.

Fatty acid profile

Metadata FA analysis

Reference

[Ref.: #43909]

Fatty acid	Percentage
C15:0 iso	25.6
C15:0 anteiso	18.4
C14:0 iso	12.1
C16:1ω11c	9
C16:0 iso	6
C16:0	5.5
C16:1ω7c alcohol	4.3
C17:0 anteiso	2.6
C19:1ω8c cyclo	2.4
C17:1 iso ω10c	1.5
C18:0	1.4
C15:0 3OH	1.4
C17:0 iso	1.4
iso-C17:1 I / anteiso C17:1 B	1.4
C18:1ω7c / C18:1ω6c	1.3
C14:0	1.2
C18:1ω9c	1.1

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #43909]	Sample type/isolated from	surface-disinfected inner leaves of Chinese red pepper (Huajiao) (Zanthoxylum bungeanum Maxim), Longnan County, Gansu, north-west China
[Ref.: #43909]	Geographic location (country and/or sea, region)	Longnan County, Gansu
[Ref.: #43909]	Country	China
[Ref.: #43909]	Country ISO 3 Code	CHN
[Ref.: #43909]	Continent	Asia
[Ref.: #43909]	Enrichment culture	Nutrient agar
[Ref.: #43909]	Enrichment culture temperature	32 ̊C

[Ref.: #67771]	Sample type/isolated from	From pepper, leaf tissue of `Zanthoxylum bungeanum` Maxim collected from Longnan country
[Ref.: #67771]	Geographic location (country and/or sea, region)	Gansu province
[Ref.: #67771]	Country	China
[Ref.: #67771]	Country ISO 3 Code	CHN
[Ref.: #67771]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Host	#Plants	#Shrub (Scrub)
#Host Body-Site	#Plant	#Leaf (Phyllosphere)
#Host Body-Site	#Plant	#Sterilized plant part

What are isolation sources categories?

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #43909]	16S rRNA gene sequence	KX865139		GenBank

[Ref.: #43909]	GC-content	39.4 mol%	high performance liquid chromatography (HPLC)
[Ref.: #67771]	GC-content	39.4 mol%

Availability in culture collections External links

[Ref.: #43909]

Culture collection no.

CCTCC AB 2017021, KCTC 33827, DSM 100730

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#43909

Li Ma, Jia-Qin Xi, Yong-Hong Cao, Xiao-Yan Wang, Shuai-Chao Zheng, Cheng-Gang Yang, Ling-ling Yang, Qi-Li Mi, Xue-Mei Li, Ming-Liang Zhu, Ming-He Mo: Bacillus endozanthoxylicus sp. nov., an endophytic bacterium isolated from Zanthoxylum bungeanum Maxim leaves. IJSEM 67: 3699 - 3705 2017 ( DOI 10.1099/ijsem.0.002138 , PubMed 28879837 )

#67771 Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;
* These data were automatically processed and therefore are not curated

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