Name: Algoriphagus marisflavi KEM-106
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 141011

Type strain:

Species: Algoriphagus marisflavi

Strain Designation: KEM-106

Culture col. no.: KCTC 52979, NBRC 112904

Strain history: <- Jung-Hoon Yoon, Sungkyunkwan Univ.

NCBI tax ID(s): 2006132 (species)

Special Collections

Section

When using BacDive for research please cite our paper

Algoriphagus marisflavi KEM-106 is an aerobe, mesophilic, Gram-negative bacterium that forms circular colonies and was isolated from Water of an estuary environment, Seocheon, Yellow Sea, South Korea.

colony-forming
Gram-negative
rod-shaped
aerobe
mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	09-12-2024 (DD-MM-YYYY)
	Domain	*Bacteria*
	Phylum	*Bacteroidota*
	Class	*Cytophagia*
	Order	*Cytophagales*
	Family	*Cyclobacteriaceae*
	Genus	*Algoriphagus*
	Species	**Algoriphagus marisflavi**
	Full Scientific Name (LPSN)	Algoriphagus marisflavi Park et al. 2017

Information on morphological and physiological properties Morphology

[Ref.: #43907]	Gram stain	negative
[Ref.: #67771]	Gram stain	negative

[Ref.: #43907]	Cell length	0.6-5.0 µm

[Ref.: #43907]	Cell width	0.3-0.6 µm

[Ref.: #43907]	Cell shape	rod-shaped
[Ref.: #67771]	Cell shape	rod-shaped
[Ref.: #67771]	Cell shape	ovoid-shaped

[Ref.: #43907]	Motility	no
[Ref.: #67771]	Motility	no

[Ref.: #43907]	Colony size	0.5-1.0 mm
[Ref.: #43907]	Colony color	reddish orange
[Ref.: #43907]	Colony shape	circular
[Ref.: #43907]	Incubation period	5 days
[Ref.: #43907]	Cultivation medium used	Marine agar 2216

[Ref.: #43907]	Pigment production	no
[Ref.: #43907]	Pigment name	Flexirubin-type pigments

Information on culture and growth conditions Culture and growth conditions

[Ref.: #43907]

Culture medium

Marine agar (MA)

[Ref.: #43907]

Culture medium growth

	Kind of temperature		Temperature
[Ref.: #43907]		optimum	30 °C
[Ref.: #43907]		growth	4-35 °C
[Ref.: #43907]	negative	growth	37 °C
[Ref.: #67771]		growth	30 °C

	Kind of pH		pH
[Ref.: #43907]		optimum	7.0-8.0
[Ref.: #43907]		growth	6
[Ref.: #43907]	no	growth	5.5

Information on physiology and metabolism Physiology and metabolism

[Ref.: #43907]	Oxygen tolerance	aerobe
[Ref.: #67771]	Oxygen tolerance	aerobe

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #43907]		NaCl		growth	0-2	%(w/v)
[Ref.: #43907]		NaCl		optimum	1-2	%(w/v)

[Ref.: #43907]	Observation	quinone MK-7
[Ref.: #67771]	Observation	quinones: MK-7

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #43907]	acetate ChEBI	-	carbon source
[Ref.: #43907]	benzoate ChEBI	-	carbon source
[Ref.: #43907]	casein	+	hydrolysis
[Ref.: #43907]	cellobiose ChEBI	+	carbon source
[Ref.: #43907]	citrate ChEBI	-	carbon source
[Ref.: #43907]	D-fructose ChEBI	-	carbon source
[Ref.: #43907]	D-galactose ChEBI	-	carbon source
[Ref.: #43907]	D-glucose ChEBI	+/-	carbon source
[Ref.: #43907]	D-mannose ChEBI	+	carbon source
[Ref.: #43907]	D-xylose ChEBI	+	carbon source
[Ref.: #43907]	esculin ChEBI	-	hydrolysis
[Ref.: #43907]	formate ChEBI	-	carbon source
[Ref.: #43907]	gelatin ChEBI	-	hydrolysis
[Ref.: #43907]	hypoxanthine ChEBI	-	hydrolysis
[Ref.: #43907]	L-arabinose ChEBI	-	carbon source
[Ref.: #43907]	L-malate ChEBI	-	carbon source
[Ref.: #43907]	L-tyrosine ChEBI	+	hydrolysis
[Ref.: #43907]	magnesium(2+) ChEBI	+	growth
[Ref.: #43907]	maltose ChEBI	+	carbon source
[Ref.: #43907]	nitrate ChEBI	-	reduction
[Ref.: #43907]	pyruvate ChEBI	-	carbon source
[Ref.: #43907]	salicin ChEBI	-	carbon source
[Ref.: #43907]	sodium L-glutamate ChEBI	-	carbon source
[Ref.: #43907]	starch ChEBI	+	hydrolysis
[Ref.: #43907]	succinate ChEBI	-	carbon source
[Ref.: #43907]	sucrose ChEBI	+	carbon source
[Ref.: #43907]	trehalose ChEBI	+	carbon source
[Ref.: #43907]	tween 80 ChEBI	-	hydrolysis
[Ref.: #43907]	urea ChEBI	-	hydrolysis
[Ref.: #43907]	xanthine ChEBI	-	hydrolysis
	Only first 10 entries are displayed. Click here to see all.

	Metabolite	Antibiotic sensitivity	Concentration		Antibiotic resistance	Concentration
[Ref.: #43907]	ampicillin ChEBI				yes	10	µg (disc)
[Ref.: #43907]	carbenicillin ChEBI	yes	100	µg (disc)
[Ref.: #43907]	cefalotin ChEBI	yes	30	µg (disc)
[Ref.: #43907]	chloramphenicol ChEBI	yes	100
[Ref.: #43907]	gentamicin ChEBI				yes	30	µg (disc)
[Ref.: #43907]	kanamycin ChEBI				yes	30	µg (disc)
[Ref.: #43907]	lincomycin ChEBI	yes	15	µg (disc)
[Ref.: #43907]	neomycin ChEBI				yes	30	µg (disc)
[Ref.: #43907]	novobiocin ChEBI	yes	5	µg (disc)
[Ref.: #43907]	oleandomycin ChEBI	yes	15	µg (disc)
[Ref.: #43907]	penicillin g ChEBI				yes	20	Unit (disc)
[Ref.: #43907]	polymyxin b ChEBI				yes	100	Unit (disc)
[Ref.: #43907]	streptomycin ChEBI				yes	50	µg (disc)
[Ref.: #43907]	tetracycline ChEBI	yes	30	µg (disc)
	Only first 10 entries are displayed. Click here to see all.

	Enzyme	Enzyme activity	EC number
[Ref.: #43907]	acid phosphatase	+	3.1.3.2
[Ref.: #43907]	alkaline phosphatase	+	3.1.3.1
[Ref.: #43907]	alpha-chymotrypsin	+	3.4.21.1
[Ref.: #43907]	alpha-fucosidase	-	3.2.1.51
[Ref.: #43907]	alpha-galactosidase	-	3.2.1.22
[Ref.: #43907]	alpha-glucosidase	-	3.2.1.20
[Ref.: #43907]	alpha-mannosidase	-	3.2.1.24
[Ref.: #43907]	beta-galactosidase	-	3.2.1.23
[Ref.: #43907]	beta-glucosidase	-	3.2.1.21
[Ref.: #43907]	beta-glucuronidase	-	3.2.1.31
[Ref.: #43907]	catalase	+	1.11.1.6
[Ref.: #43907]	cystine arylamidase	-	3.4.11.3
[Ref.: #43907]	cytochrome oxidase	+	1.9.3.1
[Ref.: #43907]	esterase (C 4)	-
[Ref.: #43907]	esterase Lipase (C 8)	-
[Ref.: #43907]	leucine arylamidase	+	3.4.11.1
[Ref.: #43907]	lipase (C 14)	-
[Ref.: #43907]	N-acetyl-beta-glucosaminidase	+	3.2.1.52
[Ref.: #43907]	naphthol-AS-BI-phosphohydrolase	+
[Ref.: #43907]	trypsin	-	3.4.21.4
[Ref.: #43907]	valine arylamidase	+
	Only first 10 entries are displayed. Click here to see all.

Fatty acid profile

Metadata FA analysis

Reference

[Ref.: #43907]

Fatty acid	Percentage
C15:0 iso	40.3
C16:1ω7c / C16:1ω6c	13.1
C17:0 iso 3OH	6.8
C16:0 iso	5.3
C15:0 iso 3OH	5.1
C15:0 anteiso	4.4
C16:0 iso 3OH	4
C17:1 iso ω9c	3.5
C16:1ω5c	2.8
C11:0 iso	1.8
C11:0 anteiso	1.3
is-C16:1 H	1.2
C15:1ω6c	1.2
C17:1 iso I /C17:1 anteiso B	1.2
C15:1 iso h / C13:0 3OH	1.1

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #43907]	Sample type/isolated from	Water of an estuary environment, Seocheon, Yellow Sea, South Korea
[Ref.: #43907]	Geographic location (country and/or sea, region)	Seocheon, Yellow Sea
[Ref.: #43907]	Country	Republic of Korea
[Ref.: #43907]	Country ISO 3 Code	KOR
[Ref.: #43907]	Continent	Asia
[Ref.: #43907]	Enrichment culture	Marine agar 2216
[Ref.: #43907]	Enrichment culture temperature	25 ̊C

[Ref.: #67771]	Sample type/isolated from	From water from an estuary environment where the ocean and a river meet at Seocheon
[Ref.: #67771]	Country	Republic of Korea
[Ref.: #67771]	Country ISO 3 Code	KOR
[Ref.: #67771]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental

#Aquatic

#Estuary

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence MF193603 (>99% sequence identity) for Algoriphagus marisflavi subclade from Microbeatlas

Aquatic Samples	6623
Soil Samples	2316
Animal Samples	689
Plant Samples	107
Total Samples	9735

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #43907]	Algoriphagus marisflavi strain KEM-106 16S ribosomal RNA gene, partial sequence	MF193603		GenBank ENA

[Ref.: #43907]	GC-content	42.7 mol%	high performance liquid chromatography (HPLC)
[Ref.: #67771]	GC-content	42.7 mol%

Availability in culture collections External links

[Ref.: #43907]

Culture collection no.

KCTC 52979, NBRC 112904

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Algoriphagus marisflavi sp. nov., isolated from water of an estuary environment.	Park S, Park JM, Yoon JH	Int J Syst Evol Microbiol	10.1099/ijsem.0.002273	2017	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#43907

Sooyeon Park, Ji-Min Park, Jung-Hoon Yoon: Algoriphagus marisflavi sp. nov., isolated from water of an estuary environment. IJSEM 67: 4168 - 4174 2017 ( DOI 10.1099/ijsem.0.002273 , PubMed 28920831 )

#67771 Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

* These data were automatically processed and therefore are not curated

Change proposal

You found an error in BacDive? Please tell us about it!

Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.

Search for species Algoriphagus marisflavi in external resources:
SILVA
BRENDA
PANGAEA
GBIF