Name: Aquimarina hainanensis M124
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 140942

Type strain:

Species: Aquimarina hainanensis

Strain Designation: M124

Culture col. no.: KCTC 42423, MCCC 1K00498

Strain history: <- Xiao-Hua Zhang, Ocean Univ. of China

NCBI tax ID(s): 1578017 (species)

Section

Aquimarina hainanensis M124 is an obligate aerobe, Gram-negative, rod-shaped bacterium that forms irregular colonies and was isolated from Diseased Pacific white shrimp obtained from a hatchery in Hainan.

colony-forming
Gram-negative
rod-shaped
obligate aerobe
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacteroidota*
	Class	*Flavobacteriia*
	Order	*Flavobacteriales*
	Family	*Flavobacteriaceae*
	Genus	*Aquimarina*
	Species	**Aquimarina hainanensis**
	Full Scientific Name (LPSN)	Aquimarina hainanensis Zheng et al. 2016

Information on morphological and physiological properties Morphology

[Ref.: #43833]	Gram stain	negative
[Ref.: #67771]	Gram stain	negative

[Ref.: #43833]	Cell length	3-5.7 µm

[Ref.: #43833]	Cell width	0.5 µm

[Ref.: #43833]	Cell shape	rod-shaped
[Ref.: #67771]	Cell shape	rod-shaped

[Ref.: #43833]	Motility	no
[Ref.: #67771]	Motility	no

[Ref.: #43833]	Colony color	Orange
[Ref.: #43833]	Colony shape	irregular
[Ref.: #43833]	Incubation period	2-3 days
[Ref.: #43833]	Cultivation medium used	MA agar

[Ref.: #43833]	Pigment production	no
[Ref.: #43833]	Pigment name	Flexirubin

Information on culture and growth conditions Culture and growth conditions

[Ref.: #43833]

Culture medium

Marine agar (MA)

[Ref.: #43833]

Culture medium growth

		Temperature
[Ref.: #43833]	growth	16-37 °C
[Ref.: #43833]	optimum	28 °C
[Ref.: #67771]	growth	28 °C

[Ref.: #43833]	Temperature range	mesophilic
[Ref.: #67771]	Temperature range	mesophilic

	pH	Kind of pH		pH
[Ref.: #43833]			optimum	7
[Ref.: #43833]			growth	7-8

Information on physiology and metabolism Physiology and metabolism

[Ref.: #43833]	Oxygen tolerance	obligate aerobe
[Ref.: #67771]	Oxygen tolerance	aerobe

[Ref.: #43833]

Ability of spore formation

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #43833]		NaCl		growth	2-5	%(w/v)
[Ref.: #43833]		NaCl		optimum	3	%(w/v)

[Ref.: #67771]

Observation

quinones: MK-6

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #43833]	2,2-dimethylsuccinic acid ChEBI	+	oxidation
[Ref.: #43833]	2-oxobutanoate ChEBI	+	oxidation
[Ref.: #43833]	2-oxopentanoate ChEBI	+	oxidation
[Ref.: #43833]	5-dehydro-D-gluconate ChEBI	+	builds acid from
[Ref.: #43833]	acetate ChEBI	+	oxidation
[Ref.: #43833]	alginate ChEBI	-	hydrolysis
[Ref.: #43833]	alpha-D-glucose ChEBI	+	oxidation
[Ref.: #43833]	carboxymethylcellulose ChEBI	+	hydrolysis
[Ref.: #43833]	casein	-	hydrolysis
[Ref.: #43833]	cellobiose ChEBI	+	oxidation
[Ref.: #43833]	chitin ChEBI	+	hydrolysis
[Ref.: #43833]	D-fructose ChEBI	+	oxidation
[Ref.: #43833]	D-galacturonic acid ChEBI	+	oxidation
[Ref.: #43833]	D-glucose 6-phosphate ChEBI	+	oxidation
[Ref.: #43833]	D-mannose ChEBI	+	assimilation
[Ref.: #43833]	D-mannose ChEBI	+	oxidation
[Ref.: #43833]	D-serine ChEBI	+	oxidation
[Ref.: #43833]	dna ChEBI	+	hydrolysis
[Ref.: #43833]	esculin ChEBI	+	builds acid from
[Ref.: #43833]	esculin ChEBI	+	hydrolysis
[Ref.: #43833]	gelatin ChEBI	+	hydrolysis
[Ref.: #43833]	glucose 1-phosphate ChEBI	+	oxidation
[Ref.: #43833]	glycyl L-aspartic acid ChEBI	+	oxidation
[Ref.: #43833]	glycyl-l-glutamate ChEBI	+	oxidation
[Ref.: #43833]	hydroxyproline ChEBI	+	oxidation
[Ref.: #43833]	inosine ChEBI	+	oxidation
[Ref.: #43833]	L-alaninamide ChEBI	+	oxidation
[Ref.: #43833]	L-alanine ChEBI	+	oxidation
[Ref.: #43833]	L-alanylglycine ChEBI	+	oxidation
[Ref.: #43833]	L-asparagine ChEBI	+	oxidation
[Ref.: #43833]	L-aspartate ChEBI	+	oxidation
[Ref.: #43833]	L-glutamate ChEBI	+	oxidation
[Ref.: #43833]	L-ornithine ChEBI	+	oxidation
[Ref.: #43833]	L-proline ChEBI	+	oxidation
[Ref.: #43833]	L-serine ChEBI	+	oxidation
[Ref.: #43833]	L-threonine ChEBI	+	oxidation
[Ref.: #43833]	lactate ChEBI	+	oxidation
[Ref.: #43833]	leucine ChEBI	-	assimilation
[Ref.: #43833]	N-acetylglucosamine ChEBI	+	oxidation
[Ref.: #43833]	nitrate ChEBI	+	reduction
[Ref.: #43833]	propionate ChEBI	+	oxidation
[Ref.: #43833]	starch ChEBI	-	hydrolysis
[Ref.: #43833]	thymidine ChEBI	+	oxidation
[Ref.: #43833]	tween 20 ChEBI	+	hydrolysis
[Ref.: #43833]	tween 40 ChEBI	+	hydrolysis
[Ref.: #43833]	tween 80 ChEBI	+	hydrolysis
[Ref.: #43833]	uridine ChEBI	+	oxidation
	Only first 10 entries are displayed. Click here to see all.

	Enzyme	Enzyme activity	EC number
[Ref.: #43833]	acid phosphatase	+	3.1.3.2
[Ref.: #43833]	alkaline phosphatase	+	3.1.3.1
[Ref.: #43833]	alpha-chymotrypsin	-	3.4.21.1
[Ref.: #43833]	alpha-fucosidase	-	3.2.1.51
[Ref.: #43833]	alpha-galactosidase	-	3.2.1.22
[Ref.: #43833]	alpha-glucosidase	-	3.2.1.20
[Ref.: #43833]	alpha-mannosidase	-	3.2.1.24
[Ref.: #43833]	beta-galactosidase	-	3.2.1.23
[Ref.: #43833]	beta-glucosidase	-	3.2.1.21
[Ref.: #43833]	beta-glucuronidase	-	3.2.1.31
[Ref.: #43833]	catalase	+	1.11.1.6
[Ref.: #43833]	cystine arylamidase	-	3.4.11.3
[Ref.: #43833]	cytochrome oxidase	+	1.9.3.1
[Ref.: #43833]	esterase (C 4)	+
[Ref.: #43833]	esterase Lipase (C 8)	-
[Ref.: #43833]	leucine arylamidase	+	3.4.11.1
[Ref.: #43833]	lipase (C 14)	-
[Ref.: #43833]	N-acetyl-beta-glucosaminidase	+	3.2.1.52
[Ref.: #43833]	naphthol-AS-BI-phosphohydrolase	+
[Ref.: #43833]	trypsin	+	3.4.21.4
[Ref.: #43833]	valine arylamidase	+
	Only first 10 entries are displayed. Click here to see all.

Fatty acid profile

Metadata FA analysis

Reference

[Ref.: #43833]

Fatty acid	Percentage
C15:0 iso	27.3
C17:0 iso 3OH	23.5
C16:1ω6c / C16:1ω7c	9.2
C15:1 iso G	8.4
C15:0 iso 3OH	7.1
C16:0	5.8
C16:0-10-methyl / iso-C17:1ω9c	5.3
C16:0 3OH	3.4
C18:0	2
C16:0 iso	2

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #43833]	Sample type/isolated from	Diseased Pacific white shrimp obtained from a hatchery in Hainan
[Ref.: #43833]	Geographic location (country and/or sea, region)	Hainan Province
[Ref.: #43833]	Country	China
[Ref.: #43833]	Country ISO 3 Code	CHN
[Ref.: #43833]	Continent	Asia

[Ref.: #67771]	Sample type/isolated from	From diseased Pacific white shrimp, a hatchery in Hainan
[Ref.: #67771]	Country	China
[Ref.: #67771]	Country ISO 3 Code	CHN
[Ref.: #67771]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Engineered	#Food production	#Aquaculture
#Environmental	#Aquatic	#Marine
#Host	#Arthropoda	#Crustacea

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence KP200684 (>99% sequence identity) for Aquimarina hainanensis subclade from Microbeatlas

Aquatic Samples	652
Soil Samples	8
Animal Samples	34
Plant Samples	1
Total Samples	695

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #43833]	16S rRNA gene sequence	KP200684		GenBank

[Ref.: #43833]	GC-content	33.7 mol%	high performance liquid chromatography (HPLC)
[Ref.: #67771]	GC-content	33.7 mol%

Availability in culture collections External links

[Ref.: #43833]

Culture collection no.

KCTC 42423, MCCC 1K00498

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Aquimarina hainanensis sp. nov., isolated from diseased Pacific white shrimp Litopenaeus vannamei larvae.	Zheng Y, Wang Y, Liu Y, Li W, Yu M, Zhang XH	Int J Syst Evol Microbiol	10.1099/ijsem.0.000675	2015	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#43833

Yanfen Zheng, Yanan Wang, Yan Liu, Wentao Li, Mingchao Yu, Xiao-Hua Zhang: Aquimarina hainanensis sp. nov., isolated from diseased Pacific white shrimp Litopenaeus vannamei larvae. IJSEM 66: 70 - 75 2016 ( DOI 10.1099/ijsem.0.000675 , PubMed 26463829 )

#67771 Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

* These data were automatically processed and therefore are not curated

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