Tianweitania sediminis (CGMCC 1.12944, JCM 30358, Z8)

Name: Tianweitania sediminis (CGMCC 1.12944, JCM 30358, Z8)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 140939

Type strain

Strain Designation Z8

Culture col. no. CGMCC 1.12944 JCM 30358 Z8

NCBI tax ID(s) 1502156

Special Collections JCM Literature strains

History J. Lv; Beijing Univ. of Chem. Technol., China; Z8.

Links

Tianweitania sediminis Z8 is an obligate aerobe, chemoheterotroph, Gram-negative bacterium that forms circular colonies and was isolated from Subsurface sediment collected from the Mohe Basin.

Gram-negative motile rod-shaped colony-forming obligate aerobe chemoheterotroph genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 132162

JCM 30358

@ref 20215

Last LPSN update 2026-02-09 11:33:45

Domain Bacteria

Phylum Pseudomonadota

Class Alphaproteobacteria

Order Hyphomicrobiales

Family Phyllobacteriaceae

Genus Tianweitania

Species Tianweitania sediminis

Full scientific name Tianweitania sediminis Han et al. 2016

Morphology

Cell morphology

@ref	Gram stain	Cell length	Cell width	Cell shape	Motility	Confidence
43827	negative	2-3 µm	0.4-0.5 µm	rod-shaped
125438	negative					97.833

Colony morphology

@ref	Colony size	Colony color	Colony shape	Incubation period	Medium used
43827	2 mm	White	circular	3 days	YMA

Culture and growth conditions

Culture medium

@ref	Name	Growth
43827	YMA

Culture temp

@ref	Growth	Type	Temperature (°C)
43827	positive	growth	20-35
43827	positive	optimum	28
67770	positive	growth	30

Culture pH

@ref	Ability	Type	PH
43827	positive	optimum	7
43827	positive	growth	6-8

Physiology and metabolism

Oxygen tolerance

43827

Oxygen toleranceobligate aerobe

Nutrition type

43827

Typechemoheterotroph

Halophily

@ref	Salt	Growth	Tested relation	Concentration
43827	NaCl	positive	growth	0-3 %(w/v)

Observation

67770

Observationquinones: Q-10

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
43827	17128 ChEBI	adipate	+	assimilation
43827	27613 ChEBI	amygdalin	+	builds acid from
43827	22599 ChEBI	arabinose	-	assimilation
43827	18305 ChEBI	arbutin	-	builds acid from
43827	17057 ChEBI	cellobiose	+	builds acid from
43827	62968 ChEBI	cellulose	-	hydrolysis
43827	16947 ChEBI	citrate	+	assimilation
43827	18333 ChEBI	D-arabitol	+	builds acid from
43827	15824 ChEBI	D-fructose	+	builds acid from
43827	28847 ChEBI	D-fucose	+	builds acid from
43827	12936 ChEBI	D-galactose	+	builds acid from
43827	17634 ChEBI	D-glucose	+	builds acid from
43827	62318 ChEBI	D-lyxose	+	builds acid from
43827	16899 ChEBI	D-mannitol	+	builds acid from
43827	16024 ChEBI	D-mannose	+	builds acid from
43827	16988 ChEBI	D-ribose	+	builds acid from
43827	17317 ChEBI	D-sorbose	-	builds acid from
43827	16443 ChEBI	D-tagatose	+	builds acid from
43827	65327 ChEBI	D-xylose	+	builds acid from
43827	27689 ChEBI	decanoate	+	assimilation
43827	17113 ChEBI	erythritol	+	builds acid from
43827	4853 ChEBI	esculin	-	hydrolysis
43827	4853 ChEBI	esculin	+	builds acid from
43827	16813 ChEBI	galactitol	+	builds acid from
43827	5291 ChEBI	gelatin	-	hydrolysis
43827	28066 ChEBI	gentiobiose	+	builds acid from
43827	24265 ChEBI	gluconate	-	assimilation
43827	17234 ChEBI	glucose	+	assimilation
43827	17234 ChEBI	glucose	+	builds acid from
43827	17754 ChEBI	glycerol	+	builds acid from
43827	28087 ChEBI	glycogen	+	builds acid from
43827	15443 ChEBI	inulin	-	builds acid from
43827	30849 ChEBI	L-arabinose	+	builds acid from
43827	18403 ChEBI	L-arabitol	+	builds acid from
43827	18287 ChEBI	L-fucose	+	builds acid from
43827	62345 ChEBI	L-rhamnose	+	builds acid from
43827	25115 ChEBI	malate	-	assimilation
43827	17306 ChEBI	maltose	-	assimilation
43827	17306 ChEBI	maltose	+	builds acid from
43827	29864 ChEBI	mannitol	+	assimilation
43827	37684 ChEBI	mannose	-	assimilation
43827	6731 ChEBI	melezitose	-	builds acid from
43827	320061 ChEBI	methyl alpha-D-glucopyranoside	-	builds acid from
43827	43943 ChEBI	methyl alpha-D-mannoside	-	builds acid from
43827	74863 ChEBI	methyl beta-D-xylopyranoside	-	builds acid from
43827	17268 ChEBI	myo-inositol	+	builds acid from
43827	506227 ChEBI	N-acetylglucosamine	-	assimilation
43827	17632 ChEBI	nitrate	-	reduction
43827	17309 ChEBI	pectin	-	hydrolysis
43827	18401 ChEBI	phenylacetate	+	assimilation
43827		potassium 2-dehydro-D-gluconate	-	builds acid from
43827		potassium 5-dehydro-D-gluconate	-	builds acid from
43827	32032 ChEBI	potassium gluconate	-	builds acid from
43827	16634 ChEBI	raffinose	+	builds acid from
43827	15963 ChEBI	ribitol	+	builds acid from
43827	17814 ChEBI	salicin	+	builds acid from
43827	28017 ChEBI	starch	-	builds acid from
43827	28017 ChEBI	starch	-	hydrolysis
43827	17992 ChEBI	sucrose	+	builds acid from
43827	27082 ChEBI	trehalose	+	builds acid from
43827	32528 ChEBI	turanose	+	builds acid from
43827	53426 ChEBI	tween 80	-	hydrolysis
43827	16199 ChEBI	urea	-	hydrolysis
43827	17151 ChEBI	xylitol	-	builds acid from

Antibiotic resistance

@ref	ChEBI	Metabolite	Sensitivity conc.	Resistance conc.
43827	2637	amikacin	30000 µg (disc)
43827	28971	ampicillin	10000 µg (disc)
43827	3393	carbenicillin	100000 µg (disc)
43827	474053	cefazolin	30000 µg (disc)
43827	3493	cefoperazone	75000 µg (disc)
43827	3508	ceftazidime	30000 µg (disc)
43827	29007	ceftriaxone	30000 µg (disc)
43827	3515	cefuroxime	30 µg (disc)
43827	3534	cephalexin	30000 µg (disc)
43827	3547	cephradine	30000 µg (disc)
43827	17698	chloramphenicol	30000 µg (disc)
43827	100241	ciprofloxacin	5000 µg (disc)
43827	3745	clindamycin		2000 µg (disc)
43827	50845	doxycycline	30000 µg (disc)
43827	48923	erythromycin	15000 µg (disc)
43827	5195	furazolidone	300000 µg (disc)
43827	17833	gentamicin		10000 µg (disc)
43827	6104	kanamycin	30000 µg (disc)
43827	31845	midecamycin	30000 µg (disc)
43827	50694	minocycline	30000 µg (disc)
43827	7507	neomycin		30000 µg (disc)
43827	100246	norfloxacin	10000 µg (disc)
43827	7731	ofloxacin	5000 µg (disc)
43827	7809	oxacillin		1000 µg (disc)
43827	18208	penicillin g	10 Unit (disc)
43827	8232	piperacillin	100000 µg (disc)
43827	8309	polymyxin b		300 Unit (disc)
43827	9332	sulfamethoxazole	23750 µg (disc)
43827	27902	tetracycline	30000 µg (disc)
43827	45924	trimethoprim	12500 µg (disc)
43827	28001	vancomycin	30000 µg (disc)

Metabolite production

@ref	Chebi-ID	Metabolite	Production
43827	35581 ChEBI	indole

Enzymes

@ref	Value	Activity	Ec
43827	acid phosphatase	+	3.1.3.2
43827	alkaline phosphatase	-	3.1.3.1
43827	alpha-galactosidase	-	3.2.1.22
43827	alpha-glucosidase	-	3.2.1.20
43827	alpha-mannosidase	+	3.2.1.24
43827	arginine dihydrolase	-	3.5.3.6
43827	beta-D-fucosidase	-	3.2.1.38
43827	beta-galactosidase	+	3.2.1.23
43827	beta-glucosidase	-	3.2.1.21
43827	beta-glucuronidase	-	3.2.1.31
43827	catalase	-	1.11.1.6
43827	chymotrypsin	-	3.4.4.5
43827	cystine arylamidase	-	3.4.11.3
43827	cytochrome oxidase	+	1.9.3.1
43827	esterase (C 4)	+
43827	esterase Lipase (C 8)	+
43827	leucine arylamidase	-	3.4.11.1
43827	lipase (C 14)	-
43827	N-acetyl-beta-glucosaminidase	-	3.2.1.52
43827	naphthol-AS-BI-phosphohydrolase	+
43827	trypsin	-	3.4.21.4
43827	valine arylamidase	-

Fatty acid profile

Metadata FA analysis

@ref

43827

Fatty acid	Percentage
C18:1ω7c / C18:1ω6c	48.6
C17:1 iso I / C17:1 anteiso B	27.9
C19:0cycloω8c	6.4
C16:0	5.1
C18:0	4
C15:0	2
C16:1ω7c / C16:1ω6c	1.5

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Aquatic	#Marine
#Environmental	#Aquatic	#Sediment

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
43827	Subsurface sediment collected from the Mohe Basin	Mohe Basin, north-east China	China	CHN	Asia
67770	Terrestrial sediment of the Mohe Basin in north-east China

Taxonmaps

69479

Global distribution of 16S sequence KJ577584 (>99% sequence identity) for Tianweitania from Microbeatlas

Aquatic Samples	17
Soil Samples	107
Animal Samples	36
Plant Samples	20
Total Samples	180

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM1781333v1 assembly for Tianweitania sediminis Z8	contig	GCA_017813335	1502156.3	2994093138	1502156	70.82
124043	ASM4265230v1 assembly for Tianweitania sediminis CGMCC 1.12944	contig	GCA_042652305			1502156	68.98

16S sequences

@ref	Description	Accession	Database
43827	Tianweitania sediminis strain Z8 16S ribosomal RNA gene, partial sequence	KJ577584

GC content

@ref	GC-content (mol%)	Method
43827	59.6	high performance liquid chromatography (HPLC)

Genome-based predictions

Predictions

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Tianweitania sediminis Z8
NCBI: GCA_017813335.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	97.83	yes
125438	anaerobic	anaerobicⓘ	no	90.93	yes
125438	aerobic	aerobicⓘ	yes	84.33	no
125438	spore-forming	spore-formingⓘ	no	88.80	no
125438	thermophilic	thermophileⓘ	no	95.56	yes
125438	flagellated	motile2+ⓘ	yes	51.11	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Tianweitania sediminis gen. nov., sp. nov., a member of the family Phyllobacteriaceae, isolated from subsurface sediment core.	Han L, Mo Y, Feng Q, Zhang R, Zhao X, Lv J, Xie B	Int J Syst Evol Microbiol	10.1099/ijsem.0.000785	2015

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#43827	Lu Han, Yongxin Mo, Qingqing Feng, Rengang Zhang, Xingmin Zhao, Jie Lv, Bing Xie: Tianweitania sediminis gen. nov., sp. nov., a member of the family Phyllobacteriaceae, isolated from subsurface sediment core. IJSEM 66: 719 - 724 2016 ( DOI 10.1099/ijsem.0.000785 , PubMed 26597787 )
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Tianweitania sediminis (CGMCC 1.12944, JCM 30358, Z8)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Culture and growth conditions

Culture medium

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Nutrition type

Halophily

Observation

Metabolite utilization

Antibiotic resistance

Metabolite production

Enzymes

Fatty acid profile

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Sequence information

Genome sequences

Genome browser: GCA_017813335

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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