Name: Thermostilla marina SVX8
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 140938

Type strain:

Species: Thermostilla marina

Strain Designation: SVX8

Culture col. no.: JCM 19992, VKM B-2881

Strain history: G. B. Slobodkina; Winogradsky Inst. of Microbiol., RAS, Russia; SVX8.

NCBI tax ID(s): 1742923 (species)

Special Collections

Section

Thermostilla marina SVX8 is a facultative anaerobe, chemoorganotroph, motile bacterium that was isolated from A mixed sample of sand, fluid and seawater collected at a shallow submarine hydrothermal vent at a depth of 0.5 m and a 3 m offshore.

coccus-shaped
motile
chemoorganotroph
facultative anaerobe
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Planctomycetota*
	Class	*Planctomycetia*
	Order	*Pirellulales*
	Family	*Thermoguttaceae*
	Genus	*Thermostilla*
	Species	**Thermostilla marina**
	Full Scientific Name (LPSN)	Thermostilla marina Slobodkina et al. 2016

Information on morphological and physiological properties Morphology

[Ref.: #43826]	Cell length	0.5-1.2 µm

[Ref.: #43826]	Cell shape	coccus-shaped

[Ref.: #43826]	Motility	yes

[Ref.: #43826]	Flagellum arrangement	monotrichous, polar

Information on culture and growth conditions Culture and growth conditions

		Temperature
[Ref.: #43826]	growth	30-68 °C
[Ref.: #43826]	optimum	55 °C
[Ref.: #67770]	growth	50 °C

	pH	Kind of pH		pH
[Ref.: #43826]			optimum	7-8
[Ref.: #43826]			growth	5-9

Information on physiology and metabolism Physiology and metabolism

[Ref.: #43826]

Oxygen tolerance

facultative anaerobe

[Ref.: #43826]

Nutrition type

chemoorganotroph

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #43826]		NaCl		growth	0.8-4.5	%(w/v)
[Ref.: #43826]		NaCl		optimum	2.5-3.5	%(w/v)

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #43826]	agarose ChEBI	+	electron donor
[Ref.: #43826]	alginate ChEBI	+/-	electron donor
[Ref.: #43826]	arabinose ChEBI	+	electron donor
[Ref.: #43826]	dinitrogen oxide ChEBI	-	electron acceptor
[Ref.: #43826]	elemental sulfur ChEBI	+	electron acceptor
[Ref.: #43826]	fructose ChEBI	-	electron donor
[Ref.: #43826]	galactose ChEBI	-	electron donor
[Ref.: #43826]	lactate ChEBI	-	electron donor
[Ref.: #43826]	lactose ChEBI	-	electron donor
[Ref.: #43826]	mannose ChEBI	-	electron donor
[Ref.: #43826]	pyruvate ChEBI	+/-	electron donor
[Ref.: #43826]	xylose ChEBI	-	electron donor
	Only first 10 entries are displayed. Click here to see all.

	Enzymes	Enzyme	Enzyme activity	EC number
[Ref.: #43826]		catalase	+	1.11.1.6
[Ref.: #43826]		cytochrome oxidase	-	1.9.3.1

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #43826]	Sample type/isolated from	A mixed sample of sand, fluid (thermal water and dissolved gases) and seawater collected at a shallow submarine hydrothermal vent (70° C, pH 6.5-7) at a depth of 0.5 m and a 3 m offshore
[Ref.: #43826]	Geographic location (country and/or sea, region)	Vulcano Island
[Ref.: #43826]	Country	Italy
[Ref.: #43826]	Country ISO 3 Code	ITA
[Ref.: #43826]	Continent	Europe

[Ref.: #67770]	Sample type/isolated from	Shallow submarine hydrothermal vent
[Ref.: #67770]	Geographic location (country and/or sea, region)	Vulcano Island
[Ref.: #67770]	Country	Italy
[Ref.: #67770]	Country ISO 3 Code	ITA
[Ref.: #67770]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Condition	#Thermophilic (>45°C)	-
#Environmental	#Aquatic	#Hydrothermal vent
#Environmental	#Aquatic	#Marine
#Environmental	#Terrestrial	#Sandy

What are isolation sources categories?

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #43826]	Thermostilla marina strain SVX8 16S ribosomal RNA gene, partial sequence	KR872395		GenBank ENA

[Ref.: #67770]

GC-content

58.5 mol%

thermal denaturation, midpoint method (Tm)

Availability in culture collections External links

[Ref.: #43826]

Culture collection no.

JCM 19992, VKM B-2881

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Thermostilla marina gen. nov., sp. nov., a thermophilic, facultatively anaerobic planctomycete isolated from a shallow submarine hydrothermal vent.	Slobodkina GB, Panteleeva AN, Beskorovaynaya DA, Bonch-Osmolovskaya EA, Slobodkin AI	Int J Syst Evol Microbiol	10.1099/ijsem.0.000767	2015	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#43826

Galina B. Slobodkina, Angela N. Panteleeva, Darya A. Beskorovaynaya, Elizaveta A. Bonch-Osmolovskaya, Alexander I. Slobodkin: Thermostilla marina gen. nov., sp. nov., a thermophilic, facultatively anaerobic planctomycete isolated from a shallow submarine hydrothermal vent. IJSEM 66: 633 - 638 2016 ( DOI 10.1099/ijsem.0.000767 , PubMed 26559645 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;
* These data were automatically processed and therefore are not curated

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