Name: Falsibacillus pallidus CW 7
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 1409

Type strain:

Species: Falsibacillus pallidus

Strain Designation: CW 7

Culture col. no.: DSM 25281, CCTCC AB 207188, KCTC 13200, LMG 24451, CIP 109936, BCRC 80032

Strain history: CIP <- 2009, KCTC

NCBI tax ID(s): 493781 (species)

SI-ID 323287

LMG 24451, KCTC 13200, LMG 24444, CIP 109936

Special Collections

Section

Falsibacillus pallidus CW 7 is an aerobe, spore-forming, Gram-positive bacterium that forms circular colonies and was isolated from forest soil.

colony-forming
Gram-positive
motile
rod-shaped
spore-forming
aerobe
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Caryophanales*
	Family	*Bacillaceae*
	Genus	*Falsibacillus*
	Species	**Falsibacillus pallidus**
	Full Scientific Name (LPSN)	Falsibacillus pallidus (Zhou et al. 2008) Zhou et al. 2009

Synonym

Bacillus pallidus

Information on morphological and physiological properties Morphology

[Ref.: #23035]	Gram stain	positive
[Ref.: #31181]	Gram stain	positive
[Ref.: #67771]	Gram stain	positive
[Ref.: #121514]	Gram stain	positive

[Ref.: #23035]	Cell length	1.8-3.5 µm
[Ref.: #31181]	Cell length	1.8-3.5 µm

[Ref.: #23035]	Cell width	0.7-1.0 µm
[Ref.: #31181]	Cell width	0.7-1 µm

[Ref.: #23035]	Cell shape	rod-shaped
[Ref.: #31181]	Cell shape	rod-shaped
[Ref.: #121514]	Cell shape	rod-shaped
[Ref.: #67771]	Cell shape	rod-shaped

[Ref.: #23035]	Motility	yes
[Ref.: #31181]	Motility	yes
[Ref.: #121514]	Motility	yes
[Ref.: #67771]	Motility	yes

[Ref.: #23035]	Flagellum arrangement	peritrichous
[Ref.: #67771]	Flagellum arrangement	peritrichous

[Ref.: #23035]	Colony color	light pink
[Ref.: #23035]	Colony shape	circular
[Ref.: #23035]	Incubation period	2 days
[Ref.: #23035]	Cultivation medium used	TYB medium

[Ref.: #31181]

Pigment production

yes

Information on culture and growth conditions Culture and growth conditions

[Ref.: #17978]

Culture medium

TYB MEDIUM (DSMZ Medium 1247)

[Ref.: #17978]

Culture medium growth

[Ref.: #17978]

Culture medium link

Medium recipe at MediaDive

[Ref.: #17978]

Culture medium composition

expand / minimize

[Ref.: #23035]

Culture medium

TYB medium

[Ref.: #23035]

Culture medium growth

[Ref.: #37692]

Culture medium

MEDIUM 72- for trypto casein soja agar

[Ref.: #37692]

Culture medium growth

[Ref.: #37692]

Culture medium composition

expand / minimize

[Ref.: #121514]

Culture medium

CIP Medium 72

[Ref.: #121514]

Culture medium growth

[Ref.: #121514]

Culture medium link

Medium recipe provided by DSMZ

[Ref.: #121514]

Culture medium

CIP Medium 566

[Ref.: #121514]

Culture medium growth

[Ref.: #121514]

Culture medium link

Medium recipe provided by DSMZ

		Temperature
[Ref.: #17978]	growth	30 °C
[Ref.: #23035]	growth	15.0-42.0 °C
[Ref.: #23035]	optimum	30.0-37.0 °C
[Ref.: #31181]	growth	15-42 °C
[Ref.: #31181]	optimum	30-37 °C
[Ref.: #37692]	growth	37 °C
[Ref.: #67771]	growth	30-37 °C

		pH
[Ref.: #23035]	optimum	7.0-8.0
[Ref.: #31181]	optimum	07-08
[Ref.: #23035]	growth	6.0-8.5
[Ref.: #31181]	growth	6-8.5

Information on physiology and metabolism Physiology and metabolism

[Ref.: #23035]	Oxygen tolerance	aerobe
[Ref.: #31181]	Oxygen tolerance	aerobe
[Ref.: #67771]	Oxygen tolerance	aerobe
[Ref.: #121514]	Oxygen tolerance	obligate aerobe

[Ref.: #23035]	Spore description	ellipsoidal,subterminal
[Ref.: #23035]	Type of spore	spore
[Ref.: #23035]	Ability of spore formation	yes
[Ref.: #67771]	Type of spore	spore
[Ref.: #67771]	Ability of spore formation	yes
[Ref.: #31181]	Ability of spore formation	yes
[Ref.: #69480]	Ability of spore formation	yes Confidence in %92.833
[Ref.: #69481]	Ability of spore formation	yes Confidence in %100

	Salt	Tested relation		Salt conc.
[Ref.: #23035]	NaCl	no	growth	3.0	%(w/v)
[Ref.: #23035]	NaCl	no	growth	5.0	%(w/v)
[Ref.: #23035]	NaCl	no	growth	8.0	%(w/v)

[Ref.: #23035]	Murein short key	A31
[Ref.: #23035]	Murein types	A1gamma m-Dpm-direct

[Ref.: #31181]	Observation	aggregates in chains
[Ref.: #67771]	Observation	quinones: MK-7

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #23035]	2-dehydro-D-gluconate ChEBI	+	builds acid from
[Ref.: #31181]	2-dehydro-D-gluconate ChEBI	+	carbon source
[Ref.: #23035]	5-dehydro-D-gluconate ChEBI	-	builds acid from
[Ref.: #23035]	amygdalin ChEBI	-	builds acid from
[Ref.: #23035]	arbutin ChEBI	-	builds acid from
[Ref.: #23035]	casein	+	hydrolysis
[Ref.: #23035]	cellobiose ChEBI	-	builds acid from
[Ref.: #23035]	chitin ChEBI	-	hydrolysis
[Ref.: #23035]	D-arabinose ChEBI	-	builds acid from
[Ref.: #23035]	D-arabitol ChEBI	-	builds acid from
[Ref.: #23035]	D-fructose ChEBI	-	builds acid from
[Ref.: #23035]	D-fucose ChEBI	-	builds acid from
[Ref.: #23035]	D-galactose ChEBI	-	builds acid from
[Ref.: #23035]	D-glucose ChEBI	-	builds acid from
[Ref.: #23035]	D-lyxose ChEBI	-	builds acid from
[Ref.: #23035]	D-mannose ChEBI	-	builds acid from
[Ref.: #23035]	D-ribose ChEBI	-	builds acid from
[Ref.: #23035]	D-tagatose ChEBI	-	builds acid from
[Ref.: #23035]	D-xylose ChEBI	+	builds acid from
[Ref.: #23035]	dna ChEBI	-	hydrolysis
[Ref.: #23035]	erythritol ChEBI	-	builds acid from
[Ref.: #23035]	esculin ChEBI	+	builds acid from
[Ref.: #23035]	esculin ChEBI	+	hydrolysis
[Ref.: #23035]	galactitol ChEBI	-	builds acid from
[Ref.: #23035]	gelatin ChEBI	+	hydrolysis
[Ref.: #23035]	gentiobiose ChEBI	-	builds acid from
[Ref.: #23035]	gluconate ChEBI	+	builds acid from
[Ref.: #31181]	gluconate ChEBI	+	carbon source
[Ref.: #23035]	glycerol ChEBI	-	builds acid from
[Ref.: #23035]	glycogen ChEBI	-	builds acid from
[Ref.: #23035]	inulin ChEBI	-	builds acid from
[Ref.: #23035]	L-arabinose ChEBI	-	builds acid from
[Ref.: #23035]	L-arabitol ChEBI	-	builds acid from
[Ref.: #23035]	L-fucose ChEBI	-	builds acid from
[Ref.: #23035]	L-rhamnose ChEBI	-	builds acid from
[Ref.: #23035]	L-sorbose ChEBI	-	builds acid from
[Ref.: #23035]	L-xylose ChEBI	-	builds acid from
[Ref.: #23035]	lactose ChEBI	-	builds acid from
[Ref.: #23035]	maltose ChEBI	-	builds acid from
[Ref.: #23035]	mannitol ChEBI	-	builds acid from
[Ref.: #23035]	melezitose ChEBI	-	builds acid from
[Ref.: #23035]	melibiose ChEBI	-	builds acid from
[Ref.: #23035]	methyl alpha-D-glucopyranoside ChEBI	-	builds acid from
[Ref.: #23035]	methyl alpha-D-mannoside ChEBI	-	builds acid from
[Ref.: #23035]	methyl beta-D-xylopyranoside ChEBI	-	builds acid from
[Ref.: #23035]	myo-inositol ChEBI	-	builds acid from
[Ref.: #23035]	N-acetylglucosamine ChEBI	-	builds acid from
[Ref.: #23035]	nitrate ChEBI	-	reduction
[Ref.: #121514]	nitrate ChEBI	-	reduction
[Ref.: #23035]	nitrite ChEBI	-	reduction
[Ref.: #121514]	nitrite ChEBI	-	reduction
[Ref.: #23035]	pectin ChEBI	-	hydrolysis
[Ref.: #23035]	raffinose ChEBI	-	builds acid from
[Ref.: #23035]	ribitol ChEBI	-	builds acid from
[Ref.: #23035]	salicin ChEBI	-	builds acid from
[Ref.: #23035]	sorbitol ChEBI	-	builds acid from
[Ref.: #23035]	starch ChEBI	-	builds acid from
[Ref.: #23035]	starch ChEBI	-	hydrolysis
[Ref.: #23035]	sucrose ChEBI	-	builds acid from
[Ref.: #23035]	trehalose ChEBI	-	builds acid from
[Ref.: #23035]	turanose ChEBI	-	builds acid from
[Ref.: #23035]	tween 80 ChEBI	-	hydrolysis
[Ref.: #23035]	tyrosine ChEBI	-	hydrolysis
[Ref.: #23035]	xylitol ChEBI	-	builds acid from
[Ref.: #31181]	xylose ChEBI	+	carbon source
	Only first 10 entries are displayed. Click here to see all.

	Metabolite	Production
[Ref.: #23035]	acetoin ChEBI	yes
[Ref.: #23035]	hydrogen sulfide ChEBI	no
[Ref.: #23035]	indole ChEBI	no
[Ref.: #121514]	indole ChEBI	no

	Physiological tests	Metabolite	Voges-Proskauer-test
[Ref.: #23035]		acetoin ChEBI	+

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	-	3.1.3.2	* from API zym
[Ref.: #68382]	alkaline phosphatase	-	3.1.3.1	* from API zym
[Ref.: #68382]	alpha-chymotrypsin	+	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	-	3.2.1.22	* from API zym
[Ref.: #68382]	alpha-glucosidase	+	3.2.1.20	* from API zym
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #23035]	arginine dihydrolase	-	3.5.3.6
[Ref.: #23035]	beta-galactosidase	-	3.2.1.23
[Ref.: #68382]	beta-galactosidase	-	3.2.1.23	* from API zym
[Ref.: #68382]	beta-glucosidase	-	3.2.1.21	* from API zym
[Ref.: #68382]	beta-glucuronidase	-	3.2.1.31	* from API zym
[Ref.: #23035]	catalase	+	1.11.1.6
[Ref.: #31181]	catalase	+	1.11.1.6
[Ref.: #121514]	catalase	+	1.11.1.6
[Ref.: #68382]	cystine arylamidase	-	3.4.11.3	* from API zym
[Ref.: #23035]	cytochrome oxidase	-	1.9.3.1
[Ref.: #68382]	esterase (C 4)	-		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	-		* from API zym
[Ref.: #31181]	gelatinase	+
[Ref.: #68382]	leucine arylamidase	-	3.4.11.1	* from API zym
[Ref.: #23035]	lipase	-
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #23035]	lysine decarboxylase	-	4.1.1.18
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	-		* from API zym
[Ref.: #23035]	ornithine decarboxylase	-	4.1.1.17
[Ref.: #121514]	oxidase	-
[Ref.: #68382]	trypsin	+	3.4.21.4	* from API zym
[Ref.: #23035]	urease	-	3.5.1.5
[Ref.: #121514]	urease	-	3.5.1.5
[Ref.: #68382]	valine arylamidase	-		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #121514]	12232	-	-	-	-	-	-	-	-	+	+	-	-	-	-	-	+	-	-	-	-

	Pathway	Enzyme coverage	Annotated reactions
	Pathway annotation	Computationally determined by
[Ref.: #66794]	aerobactin biosynthesis	100	1 of 1
[Ref.: #66794]	gluconeogenesis	100	8 of 8
[Ref.: #66794]	aspartate and asparagine metabolism	100	9 of 9
[Ref.: #66794]	lipoate biosynthesis	100	5 of 5
[Ref.: #66794]	teichoic acid biosynthesis	100	1 of 1
[Ref.: #66794]	coenzyme A metabolism	100	4 of 4
[Ref.: #66794]	cis-vaccenate biosynthesis	100	2 of 2
[Ref.: #66794]	pentose phosphate pathway	100	11 of 11
[Ref.: #66794]	vitamin K metabolism	100	5 of 5
[Ref.: #66794]	adipate degradation	100	2 of 2
[Ref.: #66794]	ribulose monophosphate pathway	100	2 of 2
[Ref.: #66794]	CDP-diacylglycerol biosynthesis	100	2 of 2
[Ref.: #66794]	butanoate fermentation	100	4 of 4
[Ref.: #66794]	folate polyglutamylation	100	1 of 1
[Ref.: #66794]	methylglyoxal degradation	100	5 of 5
[Ref.: #66794]	anapleurotic synthesis of oxalacetate	100	1 of 1
[Ref.: #66794]	enterobactin biosynthesis	100	3 of 3
[Ref.: #66794]	palmitate biosynthesis	100	22 of 22
[Ref.: #66794]	suberin monomers biosynthesis	100	2 of 2
[Ref.: #66794]	UDP-GlcNAc biosynthesis	100	3 of 3
[Ref.: #66794]	vitamin B1 metabolism	92.31	12 of 13
[Ref.: #66794]	threonine metabolism	90	9 of 10
[Ref.: #66794]	starch degradation	90	9 of 10
[Ref.: #66794]	chorismate metabolism	88.89	8 of 9
[Ref.: #66794]	pyrimidine metabolism	88.89	40 of 45
[Ref.: #66794]	C4 and CAM-carbon fixation	87.5	7 of 8
[Ref.: #66794]	photosynthesis	85.71	12 of 14
[Ref.: #66794]	alanine metabolism	82.76	24 of 29
[Ref.: #66794]	purine metabolism	81.91	77 of 94
[Ref.: #66794]	methionine metabolism	80.77	21 of 26
[Ref.: #66794]	peptidoglycan biosynthesis	80	12 of 15
[Ref.: #66794]	metabolism of amino sugars and derivatives	80	4 of 5
[Ref.: #66794]	cellulose degradation	80	4 of 5
[Ref.: #66794]	flavin biosynthesis	80	12 of 15
[Ref.: #66794]	glycine betaine biosynthesis	80	4 of 5
[Ref.: #66794]	glycogen metabolism	80	4 of 5
[Ref.: #66794]	tetrahydrofolate metabolism	78.57	11 of 14
[Ref.: #66794]	CO2 fixation in Crenarchaeota	77.78	7 of 9
[Ref.: #66794]	NAD metabolism	77.78	14 of 18
[Ref.: #66794]	molybdenum cofactor biosynthesis	77.78	7 of 9
[Ref.: #66794]	phenylalanine metabolism	76.92	10 of 13
[Ref.: #66794]	glycolysis	76.47	13 of 17
[Ref.: #66794]	glutamate and glutamine metabolism	75	21 of 28
[Ref.: #66794]	6-hydroxymethyl-dihydropterin diphosphate biosynthesis	75	6 of 8
[Ref.: #66794]	acetate fermentation	75	3 of 4
[Ref.: #66794]	sulfopterin metabolism	75	3 of 4
[Ref.: #66794]	ppGpp biosynthesis	75	3 of 4
[Ref.: #66794]	glycogen biosynthesis	75	3 of 4
[Ref.: #66794]	proline metabolism	72.73	8 of 11
[Ref.: #66794]	cardiolipin biosynthesis	71.43	5 of 7
[Ref.: #66794]	citric acid cycle	71.43	10 of 14
[Ref.: #66794]	heme metabolism	71.43	10 of 14
[Ref.: #66794]	propanol degradation	71.43	5 of 7
[Ref.: #66794]	Entner Doudoroff pathway	70	7 of 10
[Ref.: #66794]	4-hydroxyphenylacetate degradation	70	7 of 10
[Ref.: #66794]	propionate fermentation	70	7 of 10
[Ref.: #66794]	histidine metabolism	68.97	20 of 29
[Ref.: #66794]	degradation of sugar alcohols	68.75	11 of 16
[Ref.: #66794]	tryptophan metabolism	68.42	26 of 38
[Ref.: #66794]	formaldehyde oxidation	66.67	2 of 3
[Ref.: #66794]	L-lactaldehyde degradation	66.67	2 of 3
[Ref.: #66794]	acetyl CoA biosynthesis	66.67	2 of 3
[Ref.: #66794]	acetoin degradation	66.67	2 of 3
[Ref.: #66794]	cyanate degradation	66.67	2 of 3
[Ref.: #66794]	valine metabolism	66.67	6 of 9
[Ref.: #66794]	non-pathway related	65.79	25 of 38
[Ref.: #66794]	lipid metabolism	64.52	20 of 31
[Ref.: #66794]	ketogluconate metabolism	62.5	5 of 8
[Ref.: #66794]	leucine metabolism	61.54	8 of 13
[Ref.: #66794]	isoprenoid biosynthesis	61.54	16 of 26
[Ref.: #66794]	urea cycle	61.54	8 of 13
[Ref.: #66794]	cysteine metabolism	61.11	11 of 18
[Ref.: #66794]	phenylacetate degradation (aerobic)	60	3 of 5
[Ref.: #66794]	factor 420 biosynthesis	60	3 of 5
[Ref.: #66794]	3-chlorocatechol degradation	60	3 of 5
[Ref.: #66794]	gallate degradation	60	3 of 5
[Ref.: #66794]	oxidative phosphorylation	59.34	54 of 91
[Ref.: #66794]	reductive acetyl coenzyme A pathway	57.14	4 of 7
[Ref.: #66794]	d-mannose degradation	55.56	5 of 9
[Ref.: #66794]	serine metabolism	55.56	5 of 9
[Ref.: #66794]	lysine metabolism	54.76	23 of 42
[Ref.: #66794]	CMP-KDO biosynthesis	50	2 of 4
[Ref.: #66794]	kanosamine biosynthesis II	50	1 of 2
[Ref.: #66794]	selenocysteine biosynthesis	50	3 of 6
[Ref.: #66794]	pantothenate biosynthesis	50	3 of 6
[Ref.: #66794]	ethanol fermentation	50	1 of 2
[Ref.: #66794]	glycolate and glyoxylate degradation	50	3 of 6
[Ref.: #66794]	isoleucine metabolism	50	4 of 8
[Ref.: #66794]	dolichol and dolichyl phosphate biosynthesis	50	1 of 2
[Ref.: #66794]	quinate degradation	50	1 of 2
[Ref.: #66794]	glutathione metabolism	50	7 of 14
[Ref.: #66794]	biotin biosynthesis	50	2 of 4
[Ref.: #66794]	arginine metabolism	45.83	11 of 24
[Ref.: #66794]	4-hydroxymandelate degradation	44.44	4 of 9
[Ref.: #66794]	ubiquinone biosynthesis	42.86	3 of 7
[Ref.: #66794]	degradation of aromatic, nitrogen containing compounds	41.67	5 of 12
[Ref.: #66794]	glycine metabolism	40	4 of 10
[Ref.: #66794]	coenzyme M biosynthesis	40	4 of 10
[Ref.: #66794]	myo-inositol biosynthesis	40	4 of 10
[Ref.: #66794]	arachidonate biosynthesis	40	2 of 5
[Ref.: #66794]	polyamine pathway	39.13	9 of 23
[Ref.: #66794]	arachidonic acid metabolism	38.89	7 of 18
[Ref.: #66794]	phenylpropanoid biosynthesis	38.46	5 of 13
[Ref.: #66794]	sulfate reduction	38.46	5 of 13
[Ref.: #66794]	phosphatidylethanolamine bioynthesis	38.46	5 of 13
[Ref.: #66794]	androgen and estrogen metabolism	37.5	6 of 16
[Ref.: #66794]	dTDPLrhamnose biosynthesis	37.5	3 of 8
[Ref.: #66794]	vitamin B6 metabolism	36.36	4 of 11
[Ref.: #66794]	degradation of pentoses	35.71	10 of 28
[Ref.: #66794]	phenol degradation	35	7 of 20
[Ref.: #66794]	sphingosine metabolism	33.33	2 of 6
[Ref.: #66794]	(5R)-carbapenem carboxylate biosynthesis	33.33	1 of 3
[Ref.: #66794]	lipid A biosynthesis	33.33	3 of 9
[Ref.: #66794]	IAA biosynthesis	33.33	1 of 3
[Ref.: #66794]	octane oxidation	33.33	1 of 3
[Ref.: #66794]	bile acid biosynthesis, neutral pathway	29.41	5 of 17
[Ref.: #66794]	tyrosine metabolism	28.57	4 of 14
[Ref.: #66794]	degradation of sugar acids	28	7 of 25
[Ref.: #66794]	degradation of hexoses	27.78	5 of 18
[Ref.: #66794]	ascorbate metabolism	27.27	6 of 22
[Ref.: #66794]	d-xylose degradation	27.27	3 of 11
[Ref.: #66794]	metabolism of disaccharids	27.27	3 of 11
[Ref.: #66794]	lactate fermentation	25	1 of 4
[Ref.: #66794]	cyclohexanol degradation	25	1 of 4
[Ref.: #66794]	toluene degradation	25	1 of 4
[Ref.: #66794]	carnitine metabolism	25	2 of 8
[Ref.: #66794]	vitamin B12 metabolism	23.53	8 of 34
[Ref.: #66794]	nitrate assimilation	22.22	2 of 9
		Only first 10 entries are displayed. Click here to see all.

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #17978]	Sample type/isolated from	forest soil
[Ref.: #17978]	Geographic location (country and/or sea, region)	Anhui province
[Ref.: #17978]	Country	China
[Ref.: #17978]	Country ISO 3 Code	CHN
[Ref.: #17978]	Continent	Asia

[Ref.: #67771]	Sample type/isolated from	From forest soil
[Ref.: #67771]	Geographic location (country and/or sea, region)	Anhui Province
[Ref.: #67771]	Country	China
[Ref.: #67771]	Country ISO 3 Code	CHN
[Ref.: #67771]	Continent	Asia

[Ref.: #121514]	Sample type/isolated from	Environment, Soil, forest
[Ref.: #121514]	Geographic location (country and/or sea, region)	Anhui
[Ref.: #121514]	Country	China
[Ref.: #121514]	Country ISO 3 Code	CHN
[Ref.: #121514]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental	#Terrestrial	#Forest
#Environmental	#Terrestrial	#Soil

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #17978]	Biosafety level	1	Risk group (German classification) According to TRBA 466
[Ref.: #121514]	Biosafety level	1	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #17978]	Bacillus [pallidus] strain CW 7 16S ribosomal RNA gene, partial sequence	EU364818	1413	GenBank ENA	493781 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Falsibacillus pallidus DSM 25281	GCA_003350505	scaffold	GenBank ENA	493781 tax ID	*
[Ref.: #66792]	Falsibacillus pallidus strain DSM 25281	493781.3	wgs	PATRIC	493781 tax ID	*
[Ref.: #66792]	Falsibacillus pallidus DSM 25281	2770939515	draft	JGI IMG/M	493781 tax ID	*

[Ref.: #23035]	GC-content	42.3 mol%	high performance liquid chromatography (HPLC)
[Ref.: #67771]	GC-content	42.3 mol%

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Falsibacillus pallidus DSM 25281 NCBI: GCA_003350505.1
[Ref.: #69481]	spore-forming	spore-formingⓘ	yes	100	no

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Falsibacillus pallidus DSM 25281 NCBI: GCA_003350505.1
[Ref.: #69480]	gram-positive	gram-positiveⓘ	yes	79.712	yes
[Ref.: #69480]	anaerobic	anaerobicⓘ	no	86.88	no
[Ref.: #69480]	aerobic	aerobicⓘ	yes	77.398	yes
[Ref.: #69480]	spore-forming	spore-formingⓘ	yes	92.833	no
[Ref.: #69480]	thermophilic	thermophileⓘ	no	89.872	no
[Ref.: #69480]	flagellated	motile2+ⓘ	yes	87.093	yes

Availability in culture collections External links

[Ref.: #17978]

Culture collection no.

DSM 25281, CCTCC AB 207188, KCTC 13200, LMG 24451, CIP 109936, BCRC 80032

[Ref.: #71060]

SI-ID 323287

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Falsibacillus albus sp. nov., isolated from mangrove soil.	Shi SB, Liu C, Jiang MG, Li GD, Yang LF, Wu JF, Jiang LQ, Zhang K, Shen NK, Jiang CL, Jiang Y	Int J Syst Evol Microbiol	10.1099/ijsem.0.003328	2019	*
Phylogeny	Falsibacillus pallidus to replace the homonym Bacillus pallidus Zhou et al. 2008.	Zhou Y, Xu J, Xu L, Tindall BJ	Int J Syst Evol Microbiol	10.1099/ijs.0.014316-0	2009	*
Phylogeny	Bacillus pallidus sp. nov., isolated from forest soil.	Zhou Y, Wei W, Che Q, Xu Y, Wang X, Huang X, Lai R	Int J Syst Evol Microbiol	10.1099/ijs.0.2008/000075-0	2008	*

References

#17978

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 25281

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#23035

Yu Zhou,Junfeng Xu,Lihong Xu,Brian J. Tindall: Falsibacillus pallidus to replace the homonym Bacillus pallidus Zhou et al. 2008. IJSEM 59: 3176 - 3180 2009 ( DOI 10.1099/ijs.0.014316-0 , PubMed 19767356 )

#31181

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #27508 (see below)

#37692 ; Curators of the CIP;

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#66794

Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 )

#67771 Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;

#68382

Automatically annotated from API zym .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#71060

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID323287.1 )

#121514 Collection of Institut Pasteur ; Curators of the CIP; CIP 109936

#27508

IJSEM 2850 2008 ( DOI 10.1099/ijs.0.2008/000075-0 , PubMed 19060070 )

* These data were automatically processed and therefore are not curated

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Falsibacillus pallidus DSM 25281

Falsibacillus pallidus DSM 25281

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