Bacteroides gallinaceus LIPI12-4-Ck844 is an obligate anaerobe, mesophilic, Gram-negative prokaryote that forms circular colonies and was isolated from The caecum of a chicken.
Gram-negative rod-shaped colony-forming obligate anaerobe mesophilic 16S sequence| @ref 20215 |
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| Domain Pseudomonadati |
| Phylum Bacteroidota |
| Class Bacteroidia |
| Order Bacteroidales |
| Family Bacteroidaceae |
| Genus Bacteroides |
| Species Bacteroides gallinaceus |
| Full scientific name Bacteroides gallinaceus corrig. Irisawa et al. 2016 |
| Synonyms (2) |
| @ref | Gram stain | Cell length | Cell width | Cell shape | Motility | |
|---|---|---|---|---|---|---|
| 43707 | negative | 0.8-5 µm | 0.8-1 µm | rod-shaped |
| @ref | Colony size | Colony color | Colony shape | Incubation period | Medium used | |
|---|---|---|---|---|---|---|
| 43707 | 1-2 mm | White-greyish | circular | 2 days | EG blood agar plates |
| 43707 | Oxygen toleranceobligate anaerobe |
| 43707 | Spore formationno |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 43707 | 17057 ChEBI | cellobiose | + | builds acid from | |
| 43707 | 17057 ChEBI | cellobiose | + | fermentation | |
| 43707 | 16899 ChEBI | D-mannitol | - | builds acid from | |
| 43707 | 16024 ChEBI | D-mannose | + | builds acid from | |
| 43707 | 17924 ChEBI | D-sorbitol | - | builds acid from | |
| 43707 | 65327 ChEBI | D-xylose | + | builds acid from | |
| 43707 | 4853 ChEBI | esculin | + | hydrolysis | |
| 43707 | 5291 ChEBI | gelatin | - | hydrolysis | |
| 43707 | 17234 ChEBI | glucose | + | builds acid from | |
| 43707 | 17754 ChEBI | glycerol | - | builds acid from | |
| 43707 | 30849 ChEBI | L-arabinose | + | builds acid from | |
| 43707 | 62345 ChEBI | L-rhamnose | - | builds acid from | |
| 43707 | 62345 ChEBI | L-rhamnose | - | fermentation | |
| 43707 | 17716 ChEBI | lactose | + | builds acid from | |
| 43707 | 17306 ChEBI | maltose | + | builds acid from | |
| 43707 | 6731 ChEBI | melezitose | - | builds acid from | |
| 43707 | 17632 ChEBI | nitrate | - | reduction | |
| 43707 | 16634 ChEBI | raffinose | + | builds acid from | |
| 43707 | 17814 ChEBI | salicin | + | builds acid from | |
| 43707 | 17814 ChEBI | salicin | + | fermentation | |
| 43707 | 28017 ChEBI | starch | + | degradation | |
| 43707 | 17992 ChEBI | sucrose | + | builds acid from | |
| 43707 | 27082 ChEBI | trehalose | - | builds acid from | |
| 43707 | 37166 ChEBI | xylan | + | degradation |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 43707 | 6-phospho-beta-galactosidase | - | 3.2.1.85 | |
| 43707 | alanine arylamidase | + | 3.4.11.2 | |
| 43707 | alkaline phosphatase | + | 3.1.3.1 | |
| 43707 | alpha-arabinosidase | + | 3.2.1.55 | |
| 43707 | alpha-fucosidase | + | 3.2.1.51 | |
| 43707 | alpha-galactosidase | + | 3.2.1.22 | |
| 43707 | alpha-glucosidase | + | 3.2.1.20 | |
| 43707 | arginine arylamidase | - | ||
| 43707 | beta-galactosidase | + | 3.2.1.23 | |
| 43707 | beta-glucosidase | + | 3.2.1.21 | |
| 43707 | beta-glucuronidase | - | 3.2.1.31 | |
| 43707 | catalase | - | 1.11.1.6 | |
| 43707 | glutamate decarboxylase | - | 4.1.1.15 | |
| 43707 | glutamyl-glutamate arylamidase | + | ||
| 43707 | glycin arylamidase | - | ||
| 43707 | histidine arylamidase | - | ||
| 43707 | leucine arylamidase | - | 3.4.11.1 | |
| 43707 | leucyl glycin arylamidase | + | 3.4.11.1 | |
| 43707 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | |
| 43707 | phenylalanine arylamidase | - | ||
| 43707 | proline-arylamidase | - | 3.4.11.5 | |
| 43707 | pyroglutamic acid arylamidase | - | ||
| 43707 | serine arylamidase | - | ||
| 43707 | tyrosine arylamidase | - | ||
| 43707 | urease | - | 3.5.1.5 |
| Cat1 | Cat2 | Cat3 | |
|---|---|---|---|
| #Host | #Birds | #Chicken | |
| #Host Body-Site | #Gastrointestinal tract | #Large intestine |
| @ref | Sample type | Geographic location | Country | Country ISO 3 Code | Continent | Isolation date | |
|---|---|---|---|---|---|---|---|
| 43707 | The caecum of a chicken | Bogor | Indonesia | IDN | Asia | 2013-02 |
Global distribution of 16S sequence AB910342 (>99% sequence identity) for Bacteroides gallinaceum subclade from Microbeatlas ![]()
| @ref | Description | Accession | Database | |
|---|---|---|---|---|
| 43707 | Bacteroides gallinaceum gene for 16S ribosomal RNA, partial sequence, strain: C13EG186 | AB910339 | ||
| 43707 | Bacteroides gallinaceum gene for 16S ribosomal RNA, partial sequence, strain: C13GAMG5 | AB910340 | ||
| 43707 | Bacteroides gallinaceum gene for 16S ribosomal RNA, partial sequence, strain: C13GAMG28 | AB910341 | ||
| 43707 | Bacteroides gallinaceum gene for 16S ribosomal RNA, partial sequence, strain: C13GAMG40 | AB910342 |
| @ref | GC-content (mol%) | Method | |
|---|---|---|---|
| 43707 | 45.3 | high performance liquid chromatography (HPLC) |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Phylogeny | Bacteroides caecicola sp. nov. and Bacteroides gallinaceum sp. nov., isolated from the caecum of an Indonesian chicken. | Irisawa T, Saputra S, Kitahara M, Sakamoto M, Sulistiani, Yulineri T, Dinoto A, Ohkuma M | Int J Syst Evol Microbiol | 10.1099/ijsem.0.000899 | 2016 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #43707 | Tomohiro Irisawa, Sugiyono Saputra, Maki Kitahara, Mitsuo Sakamoto, Sulistiani, Titin Yulineri, Achmad Dinoto, Moriya Ohkuma: Bacteroides caecicola sp. nov. and Bacteroides gallinaceum sp. nov., isolated from the caecum of an Indonesian chicken. IJSEM 66: 1431 - 1437 2016 ( DOI 10.1099/ijsem.0.000899 , PubMed 26769263 ) |
| #69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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