Name: Asanoa endophytica BR3-1
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 140876

Type strain:

Species: Asanoa endophytica

Strain Designation: BR3-1

Culture col. no.: BCC 66355, NBRC 110002, DSM 111646

NCBI tax ID(s): 1623397 (species)

SI-ID 401816

DSM 111646

Section

Asanoa endophytica BR3-1 is a thermophilic, Gram-positive bacterium that was isolated from The rhizome of Boesenbergia rotunda collected from Udon Thani Province.

Gram-positive
thermophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Micromonosporales*
	Family	*Micromonosporaceae*
	Genus	*Asanoa*
	Species	**Asanoa endophytica**
	Full Scientific Name (LPSN)	Asanoa endophytica Niemhom et al. 2016

Information on morphological and physiological properties Morphology

[Ref.: #43703]	Gram stain	positive

[Ref.: #43703]	Motility	no

Information on culture and growth conditions Culture and growth conditions

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Culture medium

ISP 2

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Culture medium growth

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Culture medium

ISP 3

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Culture medium growth

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Culture medium

ISP 6

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Culture medium growth

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Culture medium

Nutrient agar (NA)

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Culture medium growth

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Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

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Culture medium growth

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Culture medium link

Medium recipe at MediaDive

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Culture medium composition

expand / minimize

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Culture medium

ISP2 MEDIUM (DSMZ Medium 987)

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Culture medium growth

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Culture medium link

Medium recipe at MediaDive

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Culture medium composition

expand / minimize

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Culture medium

ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84)

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Culture medium growth

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Culture medium link

Medium recipe at MediaDive

[Ref.: #67657]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #43703]			maximum	40 °C
[Ref.: #67657]			growth	28 °C

[Ref.: #43703]	Temperature range	thermophilic
[Ref.: #67657]	Temperature range	mesophilic

	pH	Kind of pH		pH
[Ref.: #43703]			growth	5-10

Information on physiology and metabolism Physiology and metabolism

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #43703]		NaCl		maximum	2	%(w/v)

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #43703]	cellobiose ChEBI	+	carbon source
[Ref.: #43703]	D-fructose ChEBI	+/-	carbon source
[Ref.: #43703]	D-galactose ChEBI	+/-	carbon source
[Ref.: #43703]	D-glucose ChEBI	+	carbon source
[Ref.: #43703]	D-mannose ChEBI	+/-	carbon source
[Ref.: #43703]	D-ribose ChEBI	+/-	carbon source
[Ref.: #43703]	D-xylose ChEBI	+	carbon source
[Ref.: #43703]	gelatin ChEBI	-	hydrolysis
[Ref.: #43703]	glycerol 3-phosphate ChEBI	-	carbon source
[Ref.: #43703]	L-arabinose ChEBI	+/-	carbon source
[Ref.: #43703]	L-rhamnose ChEBI	+/-	carbon source
[Ref.: #43703]	lactose ChEBI	-	carbon source
[Ref.: #43703]	mannitol ChEBI	+	carbon source
[Ref.: #43703]	melibiose ChEBI	-	carbon source
[Ref.: #43703]	myo-inositol ChEBI	-	carbon source
[Ref.: #43703]	nitrate ChEBI	-	reduction
[Ref.: #43703]	raffinose ChEBI	-	carbon source
[Ref.: #43703]	salicin ChEBI	-	carbon source
[Ref.: #43703]	starch ChEBI	+	hydrolysis
[Ref.: #43703]	sucrose ChEBI	+	carbon source
	Only first 10 entries are displayed. Click here to see all.

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #43703]	Sample type/isolated from	The rhizome of Boesenbergia rotunda collected from Udon Thani Province
[Ref.: #43703]	Geographic location (country and/or sea, region)	Udon Thani Province
[Ref.: #43703]	Country	Thailand
[Ref.: #43703]	Country ISO 3 Code	THA
[Ref.: #43703]	Continent	Asia

[Ref.: #67657]	Sample type/isolated from	Rhizome of plant, Boesenbergia rotunda
[Ref.: #67657]	Geographic location (country and/or sea, region)	Udon Thani
[Ref.: #67657]	Country	Thailand
[Ref.: #67657]	Country ISO 3 Code	THA
[Ref.: #67657]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Host	#Plants	#Herbaceous plants (Grass,Crops)
#Host Body-Site	#Plant	#Root (Rhizome)

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence LC032127 (>99% sequence identity) for Asanoa from Microbeatlas

Aquatic Samples	3
Soil Samples	41
Animal Samples
Plant Samples
Total Samples	44

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #67657]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #43703]	16S rRNA gene sequence	LC032127		GenBank

[Ref.: #43703]

GC-content

71.4 mol%

high performance liquid chromatography (HPLC)

Availability in culture collections External links

[Ref.: #67657]

Culture collection no.

BCC 66355, NBRC 110002, DSM 111646

[Ref.: #96805]

SI-ID 401816

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Asanoa endophytica sp. nov., an endophytic actinomycete isolated from the rhizome of Boesenbergia rotunda.	Niemhom N, Chutrakul C, Suriyachadkun C, Thawai C	Int J Syst Evol Microbiol	10.1099/ijsem.0.000891	2016	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#43703

Nantawan Niemhom, Chanikul Chutrakul, Chanwit Suriyachadkun, Chitti Thawai: Asanoa endophytica sp. nov., an endophytic actinomycete isolated from the rhizome of Boesenbergia rotunda. IJSEM 66: 1377 - 1382 2016 ( DOI 10.1099/ijsem.0.000891 , PubMed 26763906 )

#67657

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 111646

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#96805

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID401816.1 )

* These data were automatically processed and therefore are not curated

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