Name: Thalassobius litorarius MME-075
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 140871

Type strain:

Species: Thalassobius litorarius

Strain Designation: MME-075

Culture col. no.: KCCM 43143, JCM 30758

Strain history: M.-J. Seo; Incheon Natl. Univ., South Korea; MME-075.

NCBI tax ID(s): 1663020 (species)

Section

Thalassobius litorarius MME-075 is an aerobe, Gram-negative, rod-shaped bacterium that forms circular colonies and was isolated from Tidal flat samples of Muui-do.

colony-forming
Gram-negative
rod-shaped
aerobe
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Alphaproteobacteria*
	Order	*Rhodobacterales*
	Family	*Roseobacteraceae*
	Genus	Thalassobius
	Species	Thalassobius litorarius
	Full Scientific Name (LPSN)	Thalassobius litorarius Park et al. 2016

Synonym

Thalassovita litoraria

Information on morphological and physiological properties Morphology

[Ref.: #43696]	Gram stain	negative

[Ref.: #43696]	Cell length	1.8-2.2 µm

[Ref.: #43696]	Cell width	0.9-1.1 µm

[Ref.: #43696]	Cell shape	rod-shaped

[Ref.: #43696]	Motility	no

[Ref.: #43696]	Colony size	1 mm
[Ref.: #43696]	Colony color	Cream
[Ref.: #43696]	Colony shape	circular
[Ref.: #43696]	Incubation period	3 days
[Ref.: #43696]	Cultivation medium used	MA agar

Information on culture and growth conditions Culture and growth conditions

[Ref.: #43696]

Culture medium

Marine agar (MA)

[Ref.: #43696]

Culture medium growth

		Temperature
[Ref.: #43696]	growth	20-35 °C
[Ref.: #43696]	optimum	25-30 °C
[Ref.: #67770]	growth	30 °C

[Ref.: #43696]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

	pH	Kind of pH		pH
[Ref.: #43696]			optimum	7
[Ref.: #43696]			growth	7-9

Information on physiology and metabolism Physiology and metabolism

[Ref.: #43696]

Oxygen tolerance

aerobe

[Ref.: #43696]

Halophily / tolerance level

slightly halophilic

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #43696]		NaCl		growth	1-5	%(w/v)
[Ref.: #43696]		NaCl		optimum	2	%(w/v)

[Ref.: #67770]

Observation

quinones: Q-10

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #43696]	acetate ChEBI	+	carbon source
[Ref.: #43696]	benzoate ChEBI	-	carbon source
[Ref.: #43696]	casein	+	hydrolysis
[Ref.: #43696]	cellobiose ChEBI	-	builds acid from
[Ref.: #43696]	cellobiose ChEBI	-	carbon source
[Ref.: #43696]	citrate ChEBI	-	carbon source
[Ref.: #43696]	D-fructose ChEBI	-	builds acid from
[Ref.: #43696]	D-fructose ChEBI	+	carbon source
[Ref.: #43696]	D-galactose ChEBI	-	builds acid from
[Ref.: #43696]	D-galactose ChEBI	-	carbon source
[Ref.: #43696]	D-glucose ChEBI	-	builds acid from
[Ref.: #43696]	D-glucose ChEBI	-	carbon source
[Ref.: #43696]	D-mannitol ChEBI	-	carbon source
[Ref.: #43696]	D-mannose ChEBI	-	builds acid from
[Ref.: #43696]	D-mannose ChEBI	-	carbon source
[Ref.: #43696]	D-ribose ChEBI	-	builds acid from
[Ref.: #43696]	D-ribose ChEBI	-	carbon source
[Ref.: #43696]	D-sorbitol ChEBI	-	carbon source
[Ref.: #43696]	D-xylose ChEBI	-	builds acid from
[Ref.: #43696]	D-xylose ChEBI	-	carbon source
[Ref.: #43696]	esculin ChEBI	-	hydrolysis
[Ref.: #43696]	formate ChEBI	-	carbon source
[Ref.: #43696]	gelatin ChEBI	-	hydrolysis
[Ref.: #43696]	glucose ChEBI	-	fermentation
[Ref.: #43696]	glycerol ChEBI	-	carbon source
[Ref.: #43696]	L-arabinose ChEBI	-	builds acid from
[Ref.: #43696]	L-arabinose ChEBI	-	carbon source
[Ref.: #43696]	L-glutamate ChEBI	+	carbon source
[Ref.: #43696]	L-ornithine ChEBI	+	carbon source
[Ref.: #43696]	L-rhamnose ChEBI	-	builds acid from
[Ref.: #43696]	L-rhamnose ChEBI	-	carbon source
[Ref.: #43696]	L-tyrosine ChEBI	-	hydrolysis
[Ref.: #43696]	lactose ChEBI	-	carbon source
[Ref.: #43696]	malate ChEBI	+	carbon source
[Ref.: #43696]	maltose ChEBI	+	carbon source
[Ref.: #43696]	melibiose ChEBI	-	builds acid from
[Ref.: #43696]	melibiose ChEBI	-	carbon source
[Ref.: #43696]	myo-inositol ChEBI	-	carbon source
[Ref.: #43696]	nitrate ChEBI	-	reduction
[Ref.: #43696]	O-nitrophenyl-beta-D-galactopyranosid	-	hydrolysis
[Ref.: #43696]	pyruvate ChEBI	+	carbon source
[Ref.: #43696]	raffinose ChEBI	-	carbon source
[Ref.: #43696]	starch ChEBI	-	hydrolysis
[Ref.: #43696]	succinate ChEBI	-	carbon source
[Ref.: #43696]	sucrose ChEBI	+	carbon source
[Ref.: #43696]	trehalose ChEBI	-	builds acid from
[Ref.: #43696]	trehalose ChEBI	-	carbon source
[Ref.: #43696]	tween 20 ChEBI	-	hydrolysis
[Ref.: #43696]	tween 40 ChEBI	-	hydrolysis
[Ref.: #43696]	tween 80 ChEBI	-	hydrolysis
	Only first 10 entries are displayed. Click here to see all.

	Metabolite	Antibiotic sensitivity	Concentration		Antibiotic resistance	Concentration
[Ref.: #43696]	ampicillin ChEBI	yes	10	µg (disc)
[Ref.: #43696]	carbenicillin ChEBI	yes	100	µg (disc)
[Ref.: #43696]	cephalothin ChEBI	yes	30	µg (disc)
[Ref.: #43696]	ciprofloxacin ChEBI	yes	10	µg (disc)
[Ref.: #43696]	erythromycin ChEBI	yes	25	µg (disc)
[Ref.: #43696]	gentamicin ChEBI	yes	30	µg (disc)
[Ref.: #43696]	kanamycin ChEBI	yes	30	µg (disc)
[Ref.: #43696]	lincomycin ChEBI				yes	15	µg (disc)
[Ref.: #43696]	neomycin ChEBI	yes	30	µg (disc)
[Ref.: #43696]	norfloxacin ChEBI	yes	20	µg (disc)
[Ref.: #43696]	novobiocin ChEBI	yes	10	µg (disc)
[Ref.: #43696]	penicillin g ChEBI	yes	20	Unit (disc)
[Ref.: #43696]	polymyxin b ChEBI	yes	100	Unit (disc)
[Ref.: #43696]	streptomycin ChEBI	yes	50	µg (disc)
[Ref.: #43696]	tetracycline ChEBI	yes	30	µg (disc)
	Only first 10 entries are displayed. Click here to see all.

	Metabolite production	Metabolite	Production
[Ref.: #43696]		indole ChEBI	no

	Enzyme	Enzyme activity	EC number
[Ref.: #43696]	acid phosphatase	-	3.1.3.2
[Ref.: #43696]	alkaline phosphatase	+	3.1.3.1
[Ref.: #43696]	alpha-chymotrypsin	-	3.4.21.1
[Ref.: #43696]	alpha-fucosidase	-	3.2.1.51
[Ref.: #43696]	alpha-galactosidase	-	3.2.1.22
[Ref.: #43696]	alpha-glucosidase	-	3.2.1.20
[Ref.: #43696]	alpha-mannosidase	-	3.2.1.24
[Ref.: #43696]	arginine dihydrolase	-	3.5.3.6
[Ref.: #43696]	beta-galactosidase	-	3.2.1.23
[Ref.: #43696]	beta-glucosidase	-	3.2.1.21
[Ref.: #43696]	beta-glucuronidase	-	3.2.1.31
[Ref.: #43696]	catalase	+	1.11.1.6
[Ref.: #43696]	cystine arylamidase	-	3.4.11.3
[Ref.: #43696]	cytochrome oxidase	+	1.9.3.1
[Ref.: #43696]	esterase (C 4)	+
[Ref.: #43696]	esterase Lipase (C 8)	+
[Ref.: #43696]	leucine arylamidase	+	3.4.11.1
[Ref.: #43696]	lipase (C 14)	-
[Ref.: #43696]	N-acetyl-beta-glucosaminidase	-	3.2.1.52
[Ref.: #43696]	naphthol-AS-BI-phosphohydrolase	-
[Ref.: #43696]	trypsin	-	3.4.21.4
[Ref.: #43696]	urease	-	3.5.1.5
[Ref.: #43696]	valine arylamidase	-
	Only first 10 entries are displayed. Click here to see all.

Fatty acid profile

Metadata FA analysis

Reference

[Ref.: #43696]

Fatty acid	Percentage	ECL
C16:0	23.8	16
C16:1ω6c / C16:1ω7c / C15:0 iso 2OH	22.6	15816
C18:1ω6c / C18:1ω7c	18.5	17822
C17:0-cyclo	14.4	16888
C18:0	5.8	18
C10:0 3OH	5.3	11425
C12:0	4.4	12
C12:0 2OH	3.1	13177

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #43696]	Sample type/isolated from	Tidal flat samples of Muui-do
[Ref.: #43696]	Geographic location (country and/or sea, region)	Muui-do, Incheon
[Ref.: #43696]	Country	Republic of Korea
[Ref.: #43696]	Country ISO 3 Code	KOR
[Ref.: #43696]	Continent	Asia
[Ref.: #43696]	Geographic location	37.6800°/126.6950°

[Ref.: #67770]	Sample type/isolated from	Tidal flat
* marker position based on {}

Isolation sources categories

#Environmental

#Terrestrial

#Tidal flat

What are isolation sources categories?

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #43696]	16S rRNA gene sequence	KP410684		GenBank

[Ref.: #67770]

GC-content

62.1 mol%

high performance liquid chromatography (HPLC)

Availability in culture collections External links

[Ref.: #43696]

Culture collection no.

KCCM 43143, JCM 30758

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Thalassobius litorarius sp. nov., isolated from a tidal flat.	Park I, Cha IT, Seo MJ	Int J Syst Evol Microbiol	10.1099/ijsem.0.000931	2016	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#43696

Inhye Park, In-Tae Cha, Myung-Ji Seo: Thalassobius litorarius sp. nov., isolated from a tidal flat. IJSEM 66: 1666 - 1672 2016 ( DOI 10.1099/ijsem.0.000931 , PubMed 26821920 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;
* These data were automatically processed and therefore are not curated

Change proposal

You found an error in BacDive? Please tell us about it!

Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.

Search for species Thalassobius litorarius in external resources:
SILVA
BRENDA
PANGAEA
StrainInfo
GBIF