Name: Maribacter lutimaris KJ4
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 140859

Type strain:

Species: Maribacter lutimaris

Strain Designation: KJ4

Culture col. no.: KACC 16438, JCM 31154

Strain history: C. O. Jeon; Chung-Ang Univ., South Korea; KJ4.

NCBI tax ID(s): 1130724 (species)

Section

Maribacter lutimaris KJ4 is an obligate aerobe, Gram-negative, motile bacterium that forms circular colonies and was isolated from The surface of a tidal flat of the Gangjin bay.

colony-forming
Gram-negative
motile
rod-shaped
obligate aerobe
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacteroidota*
	Class	*Flavobacteriia*
	Order	*Flavobacteriales*
	Family	*Flavobacteriaceae*
	Genus	*Maribacter*
	Species	**Maribacter lutimaris**
	Full Scientific Name (LPSN)	Maribacter lutimaris Kim et al. 2016

Information on morphological and physiological properties Morphology

[Ref.: #43677]	Gram stain	negative

[Ref.: #43677]	Cell length	1.7-4 µm

[Ref.: #43677]	Cell width	0.2-0.4 µm

[Ref.: #43677]	Cell shape	rod-shaped

[Ref.: #43677]	Motility	yes

[Ref.: #43677]	Flagellum arrangement	gliding

[Ref.: #43677]	Colony color	Orange-yellow
[Ref.: #43677]	Colony shape	circular
[Ref.: #43677]	Cultivation medium used	Marine agar 2216

[Ref.: #43677]	Pigment production	no
[Ref.: #43677]	Pigment name	Flexirubin-type pigments

Information on culture and growth conditions Culture and growth conditions

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Culture medium

Marine agar (MA)

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Culture medium growth

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Culture medium

LB (Luria-Bertani) MEDIUM

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Culture medium growth

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Culture medium

Reasoner's 2A agar (R2A)

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Culture medium growth

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Culture medium

Trypticase Soy Agar (TSA)

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Culture medium growth

		Temperature
[Ref.: #43677]	growth	4-37 °C
[Ref.: #43677]	optimum	15-25 °C
[Ref.: #67770]	growth	25 °C

[Ref.: #67770]

Temperature range

mesophilic

	pH	Kind of pH		pH
[Ref.: #43677]			optimum	7-8.5
[Ref.: #43677]			growth	6-9

Information on physiology and metabolism Physiology and metabolism

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Oxygen tolerance

obligate aerobe

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #43677]		NaCl		growth	1-7	%(w/v)
[Ref.: #43677]		NaCl		optimum	2-5	%(w/v)

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Observation

quinones: MK-6

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #43677]	(R)-lactate ChEBI	+	oxidation
[Ref.: #43677]	(S)-lactate ChEBI	+	oxidation
[Ref.: #43677]	2-oxoglutarate ChEBI	+	oxidation
[Ref.: #43677]	4-hydroxybutyrate ChEBI	+	oxidation
[Ref.: #43677]	adipate ChEBI	-	assimilation
[Ref.: #43677]	agar ChEBI	-	hydrolysis
[Ref.: #43677]	alpha-cyclodextrin ChEBI	+	oxidation
[Ref.: #43677]	alpha-D-glucose ChEBI	+	oxidation
[Ref.: #43677]	alpha-lactose ChEBI	+	oxidation
[Ref.: #43677]	beta-hydroxybutyrate ChEBI	+	oxidation
[Ref.: #43677]	casein	-	hydrolysis
[Ref.: #43677]	cellobiose ChEBI	+	oxidation
[Ref.: #43677]	citrate ChEBI	+	oxidation
[Ref.: #43677]	D-alanine ChEBI	+	oxidation
[Ref.: #43677]	D-fructose ChEBI	+	oxidation
[Ref.: #43677]	D-galactose ChEBI	+	oxidation
[Ref.: #43677]	D-galacturonic acid ChEBI	+	oxidation
[Ref.: #43677]	D-gluconate ChEBI	+	oxidation
[Ref.: #43677]	D-glucosaminic acid ChEBI	+	oxidation
[Ref.: #43677]	D-glucose ChEBI	-	assimilation
[Ref.: #43677]	D-glucose 6-phosphate ChEBI	+	oxidation
[Ref.: #43677]	D-glucuronate ChEBI	+	oxidation
[Ref.: #43677]	D-mannitol ChEBI	-	assimilation
[Ref.: #43677]	D-mannitol ChEBI	+	oxidation
[Ref.: #43677]	D-mannose ChEBI	-	assimilation
[Ref.: #43677]	D-mannose ChEBI	+	oxidation
[Ref.: #43677]	D-psicose ChEBI	+	oxidation
[Ref.: #43677]	D-sorbitol ChEBI	+	oxidation
[Ref.: #43677]	decanoate ChEBI	-	assimilation
[Ref.: #43677]	dextrin ChEBI	+	oxidation
[Ref.: #43677]	DL-carnitine ChEBI	+	oxidation
[Ref.: #43677]	erythritol ChEBI	+	oxidation
[Ref.: #43677]	esculin ChEBI	+	hydrolysis
[Ref.: #43677]	ethanolamine ChEBI	+	oxidation
[Ref.: #43677]	gamma-aminobutyric acid ChEBI	+	oxidation
[Ref.: #43677]	gentiobiose ChEBI	+	oxidation
[Ref.: #43677]	glucose 1-phosphate ChEBI	+	oxidation
[Ref.: #43677]	glucuronamide ChEBI	+	oxidation
[Ref.: #43677]	glycerol ChEBI	+	oxidation
[Ref.: #43677]	glycerol 1-phosphate ChEBI	+	oxidation
[Ref.: #43677]	glycogen ChEBI	+	oxidation
[Ref.: #43677]	glycyl L-aspartic acid ChEBI	+	oxidation
[Ref.: #43677]	glycyl-l-glutamate ChEBI	+	oxidation
[Ref.: #43677]	hydroxyproline ChEBI	+	oxidation
[Ref.: #43677]	inosine ChEBI	+	oxidation
[Ref.: #43677]	L-alaninamide ChEBI	+	oxidation
[Ref.: #43677]	L-alanine 4-nitroanilide	+	oxidation
[Ref.: #43677]	L-alanylglycine ChEBI	+	oxidation
[Ref.: #43677]	L-arabinose ChEBI	-	assimilation
[Ref.: #43677]	L-asparagine ChEBI	+	oxidation
[Ref.: #43677]	L-aspartate ChEBI	+	oxidation
[Ref.: #43677]	L-fucose ChEBI	+	oxidation
[Ref.: #43677]	L-glutamate ChEBI	+	oxidation
[Ref.: #43677]	L-histidine ChEBI	+	oxidation
[Ref.: #43677]	L-leucine ChEBI	+	oxidation
[Ref.: #43677]	L-ornithine ChEBI	+	oxidation
[Ref.: #43677]	L-phenylalanine ChEBI	+	oxidation
[Ref.: #43677]	L-proline ChEBI	+	oxidation
[Ref.: #43677]	L-rhamnose ChEBI	+	oxidation
[Ref.: #43677]	L-serine ChEBI	+	oxidation
[Ref.: #43677]	lactulose ChEBI	+	oxidation
[Ref.: #43677]	malate ChEBI	-	assimilation
[Ref.: #43677]	maltose ChEBI	-	assimilation
[Ref.: #43677]	maltose ChEBI	+	oxidation
[Ref.: #43677]	melibiose ChEBI	+	oxidation
[Ref.: #43677]	monomethyl succinate ChEBI	+	oxidation
[Ref.: #43677]	myo-inositol ChEBI	+	oxidation
[Ref.: #43677]	N-acetylgalactosamine ChEBI	+	oxidation
[Ref.: #43677]	N-acetylglucosamine ChEBI	-	assimilation
[Ref.: #43677]	N-acetylglucosamine ChEBI	+	oxidation
[Ref.: #43677]	nitrate ChEBI	-	reduction
[Ref.: #43677]	phenylacetate ChEBI	-	assimilation
[Ref.: #43677]	phenylethylamine ChEBI	+	oxidation
[Ref.: #43677]	potassium gluconate ChEBI	-	assimilation
[Ref.: #43677]	putrescine ChEBI	+	oxidation
[Ref.: #43677]	quinate ChEBI	+	oxidation
[Ref.: #43677]	raffinose ChEBI	+	oxidation
[Ref.: #43677]	ribitol ChEBI	+	oxidation
[Ref.: #43677]	sodium citrate ChEBI	-	assimilation
[Ref.: #43677]	starch ChEBI	-	hydrolysis
[Ref.: #43677]	succinamate ChEBI	+	oxidation
[Ref.: #43677]	succinate ChEBI	+	oxidation
[Ref.: #43677]	sucrose ChEBI	+	oxidation
[Ref.: #43677]	trehalose ChEBI	+	oxidation
[Ref.: #43677]	turanose ChEBI	+	oxidation
[Ref.: #43677]	tween 20 ChEBI	+	hydrolysis
[Ref.: #43677]	tween 40 ChEBI	+	oxidation
[Ref.: #43677]	tween 80 ChEBI	+	hydrolysis
[Ref.: #43677]	tween 80 ChEBI	+	oxidation
[Ref.: #43677]	tyrosine ChEBI	+	hydrolysis
	Only first 10 entries are displayed. Click here to see all.

	Metabolite production	Metabolite	Production
[Ref.: #43677]		indole ChEBI	no

	Enzyme	Enzyme activity	EC number
[Ref.: #43677]	acid phosphatase	-	3.1.3.2
[Ref.: #43677]	alkaline phosphatase	+	3.1.3.1
[Ref.: #43677]	alpha-chymotrypsin	-	3.4.21.1
[Ref.: #43677]	alpha-fucosidase	-	3.2.1.51
[Ref.: #43677]	alpha-galactosidase	-	3.2.1.22
[Ref.: #43677]	alpha-glucosidase	+	3.2.1.20
[Ref.: #43677]	alpha-mannosidase	+	3.2.1.24
[Ref.: #43677]	arginine dihydrolase	-	3.5.3.6
[Ref.: #43677]	beta-galactosidase	+	3.2.1.23
[Ref.: #43677]	beta-glucosidase	+	3.2.1.21
[Ref.: #43677]	beta-glucuronidase	-	3.2.1.31
[Ref.: #43677]	catalase	+	1.11.1.6
[Ref.: #43677]	cystine arylamidase	+	3.4.11.3
[Ref.: #43677]	cytochrome oxidase	+	1.9.3.1
[Ref.: #43677]	esterase (C 4)	+
[Ref.: #43677]	esterase Lipase (C 8)	+
[Ref.: #43677]	gelatinase	+
[Ref.: #43677]	leucine arylamidase	+	3.4.11.1
[Ref.: #43677]	lipase (C 14)	-
[Ref.: #43677]	N-acetyl-beta-glucosaminidase	+	3.2.1.52
[Ref.: #43677]	naphthol-AS-BI-phosphohydrolase	+
[Ref.: #43677]	trypsin	+	3.4.21.4
[Ref.: #43677]	urease	-	3.5.1.5
[Ref.: #43677]	valine arylamidase	+
	Only first 10 entries are displayed. Click here to see all.

Fatty acid profile

Metadata FA analysis

Reference

[Ref.: #43677]

Fatty acid	Percentage
C18:1ω7c	28.8
C16:1ω7c / C16:1ω6c	22.4
C16:0	19.9
C14:0	8
C10:0 3OH	5.5
C12:0	5.4
iso-C15:1F	3
C10:0	2.4

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #43677]	Sample type/isolated from	The surface of a tidal flat of the Gangjin bay
[Ref.: #43677]	Geographic location (country and/or sea, region)	Gangjin Bay
[Ref.: #43677]	Country	Republic of Korea
[Ref.: #43677]	Country ISO 3 Code	KOR
[Ref.: #43677]	Continent	Asia
[Ref.: #43677]	Geographic location	34.5910°/126.7700°

[Ref.: #67770]	Sample type/isolated from	Marine sediment at Gangjin in South Korea
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	#Surface water
#Environmental	#Terrestrial	#Tidal flat

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence JN642274 (>99% sequence identity) for Maribacter from Microbeatlas

Aquatic Samples	755
Soil Samples	29
Animal Samples	17
Plant Samples	4
Total Samples	805

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #43677]	16S rRNA gene sequence	JN642274		GenBank

[Ref.: #43677]	GC-content	38 mol%	Thermal denaturation, fluorometry
[Ref.: #67770]	GC-content	38 mol%	thermal denaturation, midpoint method (Tm)

Availability in culture collections External links

[Ref.: #43677]

Culture collection no.

KACC 16438, JCM 31154

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Maribacter lutimaris sp. nov., isolated from marine sediment.	Kim KH, Jin HM, Jeong HI, Jeon CO	Int J Syst Evol Microbiol	10.1099/ijsem.0.000942	2016	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#43677

Kyung Hyun Kim, Hyun Mi Jin, Hye Im Jeong, Che Ok Jeon: Maribacter lutimaris sp. nov., isolated from marine sediment. IJSEM 66: 1773 - 1778 2016 ( DOI 10.1099/ijsem.0.000942 , PubMed 26828017 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

* These data were automatically processed and therefore are not curated

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