Nocardioides rotundus GY0594 is an aerobe, Gram-positive, coccus-shaped prokaryote that forms circular colonies and was isolated from Deep seawater samples from the western Pacific.
Gram-positive coccus-shaped colony-forming aerobe genome sequence 16S sequence| @ref 20215 |
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Last LPSN update
2025-12-16 10:03:42 |
| Domain Bacillati |
| Phylum Actinomycetota |
| Class Actinomycetes |
| Order Propionibacteriales |
| Family Nocardioidaceae |
| Genus Nocardioides |
| Species Nocardioides rotundus |
| Full scientific name Nocardioides rotundus Wang et al. 2016 |
| 43658 | Oxygen toleranceaerobe |
| 43658 | Spore formationno |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 43658 | 62064 ChEBI | 2,3-butanediol | + | respiration | |
| 43658 | 17128 ChEBI | adipate | + | assimilation | |
| 43658 | 17925 ChEBI | alpha-D-glucose | + | respiration | |
| 43658 | casein | + | hydrolysis | ||
| 43658 | 15824 ChEBI | D-fructose | + | respiration | |
| 43658 | 18024 ChEBI | D-galacturonic acid | + | respiration | |
| 43658 | 17634 ChEBI | D-glucose | - | fermentation | |
| 43658 | 17634 ChEBI | D-glucose | + | assimilation | |
| 43658 | 16899 ChEBI | D-mannitol | + | assimilation | |
| 43658 | 16024 ChEBI | D-mannose | - | assimilation | |
| 43658 | 16024 ChEBI | D-mannose | + | respiration | |
| 43658 | 27605 ChEBI | D-psicose | + | respiration | |
| 43658 | 16988 ChEBI | D-ribose | + | respiration | |
| 43658 | 27689 ChEBI | decanoate | - | assimilation | |
| 43658 | 4853 ChEBI | esculin | - | hydrolysis | |
| 43658 | 5291 ChEBI | gelatin | + | hydrolysis | |
| 43658 | 17234 ChEBI | glucose | - | fermentation | |
| 43658 | 17754 ChEBI | glycerol | + | respiration | |
| 43658 | 14336 ChEBI | glycerol 1-phosphate | + | respiration | |
| 43658 | 30849 ChEBI | L-arabinose | - | assimilation | |
| 43658 | 25115 ChEBI | malate | + | assimilation | |
| 43658 | 17306 ChEBI | maltose | - | assimilation | |
| 43658 | 44337 ChEBI | N-acetyl-L-glutamate | + | respiration | |
| 43658 | 506227 ChEBI | N-acetylglucosamine | +/- | assimilation | |
| 43658 | 17632 ChEBI | nitrate | + | reduction | |
| 43658 | O-nitrophenyl-beta-D-galactopyranosid | + | hydrolysis | ||
| 43658 | 18401 ChEBI | phenylacetate | + | assimilation | |
| 43658 | 32032 ChEBI | potassium gluconate | + | assimilation | |
| 43658 | 17272 ChEBI | propionate | + | respiration | |
| 43658 | 15361 ChEBI | pyruvate | + | respiration | |
| 43658 | 53258 ChEBI | sodium citrate | - | assimilation | |
| 43658 | 28017 ChEBI | starch | - | hydrolysis |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 43658 | acid phosphatase | + | 3.1.3.2 | |
| 43658 | alkaline phosphatase | + | 3.1.3.1 | |
| 43658 | alpha-chymotrypsin | - | 3.4.21.1 | |
| 43658 | alpha-galactosidase | - | 3.2.1.22 | |
| 43658 | alpha-glucosidase | + | 3.2.1.20 | |
| 43658 | alpha-mannosidase | - | 3.2.1.24 | |
| 43658 | arginine dihydrolase | - | 3.5.3.6 | |
| 43658 | beta-D-fucosidase | - | 3.2.1.38 | |
| 43658 | beta-galactosidase | - | 3.2.1.23 | |
| 43658 | beta-glucosidase | - | 3.2.1.21 | |
| 43658 | beta-glucuronidase | - | 3.2.1.31 | |
| 43658 | catalase | + | 1.11.1.6 | |
| 43658 | cystine arylamidase | - | 3.4.11.3 | |
| 43658 | cytochrome oxidase | - | 1.9.3.1 | |
| 43658 | esterase (C 4) | + | ||
| 43658 | esterase Lipase (C 8) | + | ||
| 43658 | leucine arylamidase | + | 3.4.11.1 | |
| 43658 | lipase (C 14) | - | ||
| 43658 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | |
| 43658 | naphthol-AS-BI-phosphohydrolase | + | ||
| 43658 | trypsin | - | 3.4.21.4 | |
| 43658 | urease | - | 3.5.1.5 | |
| 43658 | valine arylamidase | + |
Metadata FA analysis  | |||||||||||||||||||||
| @ref | 43658 | ||||||||||||||||||||
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| @ref | Sample type | Geographic location | Country | Latitude | Longitude | |
|---|---|---|---|---|---|---|
| 43658 | Deep seawater samples from the western Pacific | Western Pacific Ocean | Pacific Ocean | 11.013 | 141.955 |
Global distribution of 16S sequence KT591403 (>99% sequence identity) for Nocardioides rotundus subclade from Microbeatlas 
 Aquatic Samples |
509 |
 Soil Samples |
340 |
 Animal Samples |
1263 |
 Plant Samples |
81 |
| Total Samples | 2193 |
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 124043 | ASM1993167v1 assembly for Nocardioides rotundus MCCC 1A10561 | complete | GCA_019931675   | 1774216.3  | 8069188110  | 1774216 | 96.97 |  |
| @ref | Description | Accession | Database | |
|---|---|---|---|---|
| 43658 | Nocardioides rotundus strain GY0594 16S ribosomal RNA gene, partial sequence | KT591403 |  |
| @ref | GC-content (mol%) | Method | |
|---|---|---|---|
| 43658 | 71.2 | high performance liquid chromatography (HPLC) |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Phylogeny | Nocardioides coralli sp. nov., an actinobacterium isolated from stony coral in the South China Sea. | Shi SB, Cui LQ, Zeng Q, Long LJ, Tian XP | Int J Syst Evol Microbiol | 10.1099/ijsem.0.005342 | 2022 | |
| Phylogeny | Nocardioides rotundus sp. nov., isolated from deep seawater. | Wang L, Li J, Zhang G | Int J Syst Evol Microbiol | 10.1099/ijsem.0.000966 | 2016 | |
How to citeIf you want to cite this particular strain cite the following doi:
https://doi.org/10.13145/bacdive140849.20251217.10
When using BacDive for research please cite the following paper
BacDive in 2025: the core database for prokaryotic strain data
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