Halomonas urumqiensis (JCM 30202, CGMCC 1.12917, DSM 29014)

Name: Halomonas urumqiensis (JCM 30202, CGMCC 1.12917, DSM 29014)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 140845

Type strain

Strain Designation BZ-SZ-XY27

Culture col. no. JCM 30202 CGMCC 1.12917 DSM 29014 BZ-SZ-XY27

NCBI tax ID(s) 1684789

Special Collections DSMZ JCM Literature strains

History JCM <-- B. Zhao; Grad. Sch. of Chin. Acad. of Agric. Sci., China; BZ-SZ-XJ27.

Links

Halomonas urumqiensis BZ-SZ-XY27 is an aerobe, Gram-negative, motile bacterium that forms circular colonies and was isolated from a combined water and sediment sample from a saline-alkaline lake.

Gram-negative motile rod-shaped colony-forming aerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 393907

JCM 30202

@ref 20215

Last LPSN update 2026-05-29 08:39:49

Domain Bacteria

Phylum Pseudomonadota

Class Gammaproteobacteria

Order Oceanospirillales

Family Halomonadaceae

Genus Halomonas

Species Halomonas urumqiensis

Full scientific name Halomonas urumqiensis Zhang et al. 2016

Morphology

Cell morphology

@ref	Gram stain	Cell length	Cell width	Cell shape	Flagellum arrangement	Confidence
43650	negative	1.5-2 µm	1 µm	rod-shaped	monotrichous
125438	negative					100
125439	negative					90.732

Colony morphology

@ref	Colony size	Colony color	Colony shape	Incubation period	Medium used
43650	1-2 mm	Creamy-white	circular	2-3 days	Agar medium

Culture and growth conditions

Culture medium

@ref	Name	Growth
43650	Agar medium

Culture temp

@ref	Growth	Type	Temperature (°C)
43650	positive	growth	4-43
43650	positive	optimum	39
67770	positive	growth	37

Culture pH

@ref	Ability	Type	PH	PH range
43650	positive	optimum	8-8.5
43650	positive	growth	6-10	alkaliphile

Physiology and metabolism

Oxygen tolerance

43650

Oxygen toleranceaerobe

Spore formation

@ref	Spore formation	Confidence
125438		90.571
125439		99.621

Halophily

@ref	Halophily level	Salt	Growth	Tested relation	Concentration
43650		NaCl	positive	growth	0.22-4.32 M
43650	moderately halophilic	NaCl	positive	optimum	1.42 M

Observation

@ref	Observation
43650	No growth occurs in the absence of Na+ or under anaerobic conditions
67770	quinones: Q-9

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
43650	16651 ChEBI	(S)-lactate	+	oxidation
43650	64552 ChEBI	2-hydroxybutyrate	+	oxidation
43650	16763 ChEBI	2-oxobutanoate	+	oxidation
43650	30916 ChEBI	2-oxoglutarate	+	oxidation
43650	73918 ChEBI	3-O-methyl-D-glucose	+	oxidation
43650	18101 ChEBI	4-hydroxyphenylacetic acid	+	oxidation
43650	13705 ChEBI	acetoacetate	+	oxidation
43650	17925 ChEBI	alpha-D-glucose	+	builds acid from
43650	17925 ChEBI	alpha-D-glucose	+	carbon source
43650	17925 ChEBI	alpha-D-glucose	+	energy source
43650	17925 ChEBI	alpha-D-glucose	+	oxidation
43650	8295 ChEBI	beta-hydroxybutyrate	+	oxidation
43650		casein	-	hydrolysis
43650	17057 ChEBI	cellobiose	+	builds acid from
43650	17057 ChEBI	cellobiose	+	carbon source
43650	17057 ChEBI	cellobiose	+	energy source
43650	17057 ChEBI	cellobiose	+	oxidation
43650	18333 ChEBI	D-arabitol	+	oxidation
43650	29990 ChEBI	D-aspartate	-	carbon source
43650	29990 ChEBI	D-aspartate	-	energy source
43650	29990 ChEBI	D-aspartate	-	nitrogen source
43650	15824 ChEBI	D-fructose	+	builds acid from
43650	15824 ChEBI	D-fructose	+	carbon source
43650	15824 ChEBI	D-fructose	+	energy source
43650	15824 ChEBI	D-fructose	+	oxidation
43650	78697 ChEBI	D-fructose 6-phosphate	+	oxidation
43650	28847 ChEBI	D-fucose	+	builds acid from
43650	28847 ChEBI	D-fucose	+	carbon source
43650	28847 ChEBI	D-fucose	+	energy source
43650	28847 ChEBI	D-fucose	+	oxidation
43650	12936 ChEBI	D-galactose	-	builds acid from
43650	12936 ChEBI	D-galactose	+	carbon source
43650	12936 ChEBI	D-galactose	+	energy source
43650	12936 ChEBI	D-galactose	+	oxidation
43650	18024 ChEBI	D-galacturonic acid	+	oxidation
43650	14314 ChEBI	D-glucose 6-phosphate	+	oxidation
43650	15748 ChEBI	D-glucuronate	+	oxidation
43650	16899 ChEBI	D-mannitol	+	oxidation
43650	16024 ChEBI	D-mannose	-	builds acid from
43650	16024 ChEBI	D-mannose	-	carbon source
43650	16024 ChEBI	D-mannose	-	energy source
43650	16988 ChEBI	D-ribose	-	builds acid from
43650	16988 ChEBI	D-ribose	-	carbon source
43650	16988 ChEBI	D-ribose	-	energy source
43650	16523 ChEBI	D-serine	-	carbon source
43650	16523 ChEBI	D-serine	-	energy source
43650	16523 ChEBI	D-serine	-	nitrogen source
43650	17924 ChEBI	D-sorbitol	+	oxidation
43650	65327 ChEBI	D-xylose	+	builds acid from
43650	65327 ChEBI	D-xylose	+	carbon source
43650	65327 ChEBI	D-xylose	+	energy source
43650	23652 ChEBI	dextrin	+	oxidation
43650	16991 ChEBI	dna	-	hydrolysis
43650	29806 ChEBI	fumarate	-	growth
43650	16865 ChEBI	gamma-aminobutyric acid	+	carbon source
43650	16865 ChEBI	gamma-aminobutyric acid	+	energy source
43650	16865 ChEBI	gamma-aminobutyric acid	+	nitrogen source
43650	5291 ChEBI	gelatin	+	hydrolysis
43650	5291 ChEBI	gelatin	+	oxidation
43650	28066 ChEBI	gentiobiose	+	oxidation
43650	17234 ChEBI	glucose	-	fermentation
43650	32323 ChEBI	glucuronamide	+	carbon source
43650	32323 ChEBI	glucuronamide	+	energy source
43650	32323 ChEBI	glucuronamide	+	nitrogen source
43650	17754 ChEBI	glycerol	+	oxidation
43650	70744 ChEBI	glycine-proline	-	carbon source
43650	70744 ChEBI	glycine-proline	-	energy source
43650	70744 ChEBI	glycine-proline	-	nitrogen source
43650	70744 ChEBI	glycine-proline	+	oxidation
43650	606565 ChEBI	hippurate	-	hydrolysis
43650	16977 ChEBI	L-alanine	-	carbon source
43650	16977 ChEBI	L-alanine	-	energy source
43650	16977 ChEBI	L-alanine	-	nitrogen source
43650	30849 ChEBI	L-arabinose	+	builds acid from
43650	30849 ChEBI	L-arabinose	+	carbon source
43650	30849 ChEBI	L-arabinose	+	energy source
43650	16467 ChEBI	L-arginine	-	carbon source
43650	16467 ChEBI	L-arginine	-	energy source
43650	16467 ChEBI	L-arginine	-	nitrogen source
43650	29991 ChEBI	L-aspartate	-	carbon source
43650	29991 ChEBI	L-aspartate	-	energy source
43650	29991 ChEBI	L-aspartate	-	nitrogen source
43650	29985 ChEBI	L-glutamate	-	carbon source
43650	29985 ChEBI	L-glutamate	-	energy source
43650	29985 ChEBI	L-glutamate	-	nitrogen source
43650	15971 ChEBI	L-histidine	-	carbon source
43650	15971 ChEBI	L-histidine	-	energy source
43650	15971 ChEBI	L-histidine	-	nitrogen source
43650	18183 ChEBI	L-pyroglutamic acid	-	carbon source
43650	18183 ChEBI	L-pyroglutamic acid	-	energy source
43650	18183 ChEBI	L-pyroglutamic acid	-	nitrogen source
43650	62345 ChEBI	L-rhamnose	-	builds acid from
43650	62345 ChEBI	L-rhamnose	+	carbon source
43650	62345 ChEBI	L-rhamnose	+	energy source
43650	62345 ChEBI	L-rhamnose	+	oxidation
43650	17115 ChEBI	L-serine	-	carbon source
43650	17115 ChEBI	L-serine	-	energy source
43650	17115 ChEBI	L-serine	-	nitrogen source
43650	17716 ChEBI	lactose	-	builds acid from
43650	17716 ChEBI	lactose	-	carbon source
43650	17716 ChEBI	lactose	-	energy source
43650	17306 ChEBI	maltose	+	builds acid from
43650	17306 ChEBI	maltose	+	carbon source
43650	17306 ChEBI	maltose	+	energy source
43650	17306 ChEBI	maltose	+	oxidation
43650		manganese dioxide	-	growth
43650	6731 ChEBI	melezitose	+	builds acid from
43650	6731 ChEBI	melezitose	+	carbon source
43650	6731 ChEBI	melezitose	+	energy source
43650	28053 ChEBI	melibiose	+	oxidation
43650	74611 ChEBI	methyl (R)-lactate	+	oxidation
43650	37657 ChEBI	methyl D-glucoside	+	oxidation
43650	51850 ChEBI	methyl pyruvate	+	oxidation
43650	17632 ChEBI	nitrate	+	reduction
43650	16301 ChEBI	nitrite	-	reduction
43650	17309 ChEBI	pectin	+	oxidation
43650	16634 ChEBI	raffinose	+	builds acid from
43650	16634 ChEBI	raffinose	+	carbon source
43650	16634 ChEBI	raffinose	+	energy source
43650	16634 ChEBI	raffinose	+	oxidation
43650	17814 ChEBI	salicin	+	oxidation
43650	63005 ChEBI	sodium nitrate	-	growth
43650	78870 ChEBI	sodium nitrite	-	growth
43650	132112 ChEBI	sodium thiosulfate	-	growth
43650	28017 ChEBI	starch	-	hydrolysis
43650	17992 ChEBI	sucrose	+	builds acid from
43650	17992 ChEBI	sucrose	+	carbon source
43650	17992 ChEBI	sucrose	+	energy source
43650	27082 ChEBI	trehalose	+	oxidation
43650	53424 ChEBI	tween 20	-	hydrolysis
43650	53423 ChEBI	tween 40	+	oxidation
43650	53426 ChEBI	tween 80	-	hydrolysis
43650	18186 ChEBI	tyrosine	+	degradation
43650		yeast extract	+	oxidation

Antibiotic resistance

@ref	ChEBI	Metabolite	Resistance conc.	Sensitivity conc.
43650	2676	amoxicillin	10 µg (disc)
43650	28971	ampicillin	50 µg (disc)
43650	3393	carbenicillin	100 µg (disc)
43650	124991	cefalotin	30 µg (disc)
43650	204928	cefotaxime	30 µg (disc)
43650	209807	cefoxitin		30 µg (disc)
43650	17698	chloramphenicol		30 µg (disc)
43650	3732	clarithromycin		15 µg (disc)
43650	3745	clindamycin		2 µg (disc)
43650	48923	erythromycin		15 µg (disc)
43650	17833	gentamicin	10 µg (disc)
43650	6104	kanamycin	50 µg (disc)
43650	100147	nalidixic acid	30 µg (disc)
43650	7507	neomycin	30 µg (disc)
43650	17334	penicillin	10 Unit (disc)
43650	8309	polymyxin b	300 Unit (disc)
43650	28077	rifampicin		30 µg (disc)
43650	17076	streptomycin	300 µg (disc)
43650	9332	sulfamethoxazole	300 µg (disc)
43650	27902	tetracycline	30 µg (disc)
43650	28001	vancomycin	30 µg (disc)

Metabolite production

@ref	Chebi-ID	Metabolite
43650	15688 ChEBI	acetoin
43650	16136 ChEBI	hydrogen sulfide
43650	35581 ChEBI	indole

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test	Methylred-test
43650	15688 ChEBI	acetoin	+
43650	17234 ChEBI	glucose		-

Enzymes

@ref	Value	Activity	Ec
43650	acid phosphatase	+	3.1.3.2
43650	alkaline phosphatase	+	3.1.3.1
43650	alpha-chymotrypsin	-	3.4.21.1
43650	alpha-fucosidase	-	3.2.1.51
43650	alpha-galactosidase	-	3.2.1.22
43650	alpha-glucosidase	+	3.2.1.20
43650	alpha-mannosidase	-	3.2.1.24
43650	arginine decarboxylase	+	4.1.1.19
43650	beta-galactosidase	+	3.2.1.23
43650	beta-glucuronidase	-	3.2.1.31
43650	catalase	+	1.11.1.6
43650	cystine arylamidase	+	3.4.11.3
43650	cytochrome oxidase	+	1.9.3.1
43650	esterase (C 4)	+
43650	esterase Lipase (C 8)	+
43650	leucine arylamidase	+	3.4.11.1
43650	lipase (C 14)	-
43650	lysine decarboxylase	+	4.1.1.18
43650	N-acetyl-beta-glucosaminidase	-	3.2.1.52
43650	naphthol-AS-BI-phosphohydrolase	+
43650	ornithine decarboxylase	+	4.1.1.17
43650	trypsin	-	3.4.21.4
43650	urease	-	3.5.1.5
43650	valine arylamidase	+

Pathway annotation

Computationally determined by

@ref	pathway	enzyme coverage	annotated reactions
66794	biotin biosynthesis	100	4 of 4
66794	cis-vaccenate biosynthesis	100	2 of 2
66794	Entner Doudoroff pathway	100	10 of 10
66794	threonine metabolism	100	10 of 10
66794	palmitate biosynthesis	100	22 of 22
66794	ppGpp biosynthesis	100	4 of 4
66794	methylglyoxal degradation	100	5 of 5
66794	adipate degradation	100	2 of 2
66794	butanoate fermentation	100	4 of 4
66794	resorcinol degradation	100	2 of 2
66794	quinate degradation	100	2 of 2
66794	gluconeogenesis	100	8 of 8
66794	formaldehyde oxidation	100	3 of 3
66794	anapleurotic synthesis of oxalacetate	100	1 of 1
66794	folate polyglutamylation	100	1 of 1
66794	taurine degradation	100	1 of 1
66794	suberin monomers biosynthesis	100	2 of 2
66794	UDP-GlcNAc biosynthesis	100	3 of 3
66794	CDP-diacylglycerol biosynthesis	100	2 of 2
66794	ubiquinone biosynthesis	100	7 of 7
66794	coenzyme A metabolism	100	4 of 4
66794	glutamate and glutamine metabolism	92.86	26 of 28
66794	proline metabolism	90.91	10 of 11
66794	vitamin B6 metabolism	90.91	10 of 11
66794	chorismate metabolism	88.89	8 of 9
66794	serine metabolism	88.89	8 of 9
66794	molybdenum cofactor biosynthesis	88.89	8 of 9
66794	allantoin degradation	88.89	8 of 9
66794	lipid A biosynthesis	88.89	8 of 9
66794	valine metabolism	88.89	8 of 9
66794	C4 and CAM-carbon fixation	87.5	7 of 8
66794	isoleucine metabolism	87.5	7 of 8
66794	tetrahydrofolate metabolism	85.71	12 of 14
66794	citric acid cycle	85.71	12 of 14
66794	photosynthesis	85.71	12 of 14
66794	leucine metabolism	84.62	11 of 13
66794	phenylalanine metabolism	84.62	11 of 13
66794	vitamin B1 metabolism	84.62	11 of 13
66794	arginine metabolism	83.33	20 of 24
66794	NAD metabolism	83.33	15 of 18
66794	glycolate and glyoxylate degradation	83.33	5 of 6
66794	purine metabolism	80.85	76 of 94
66794	3-chlorocatechol degradation	80	4 of 5
66794	flavin biosynthesis	80	12 of 15
66794	peptidoglycan biosynthesis	80	12 of 15
66794	glycine betaine biosynthesis	80	4 of 5
66794	heme metabolism	78.57	11 of 14
66794	4-hydroxymandelate degradation	77.78	7 of 9
66794	CO2 fixation in Crenarchaeota	77.78	7 of 9
66794	degradation of sugar acids	76	19 of 25
66794	alanine metabolism	75.86	22 of 29
66794	pyrimidine metabolism	75.56	34 of 45
66794	alginate biosynthesis	75	3 of 4
66794	CMP-KDO biosynthesis	75	3 of 4
66794	cyclohexanol degradation	75	3 of 4
66794	acetate fermentation	75	3 of 4
66794	lipid metabolism	74.19	23 of 31
66794	polyamine pathway	73.91	17 of 23
66794	cysteine metabolism	72.22	13 of 18
66794	glutathione metabolism	71.43	10 of 14
66794	reductive acetyl coenzyme A pathway	71.43	5 of 7
66794	propanol degradation	71.43	5 of 7
66794	cardiolipin biosynthesis	71.43	5 of 7
66794	glycolysis	70.59	12 of 17
66794	urea cycle	69.23	9 of 13
66794	acetoin degradation	66.67	2 of 3
66794	aspartate and asparagine metabolism	66.67	6 of 9
66794	cyanate degradation	66.67	2 of 3
66794	L-lactaldehyde degradation	66.67	2 of 3
66794	octane oxidation	66.67	2 of 3
66794	methionine metabolism	65.38	17 of 26
66794	oxidative phosphorylation	63.74	58 of 91
66794	pentose phosphate pathway	63.64	7 of 11
66794	non-pathway related	63.16	24 of 38
66794	ketogluconate metabolism	62.5	5 of 8
66794	degradation of sugar alcohols	62.5	10 of 16
66794	6-hydroxymethyl-dihydropterin diphosphate biosynthesis	62.5	5 of 8
66794	phosphatidylethanolamine bioynthesis	61.54	8 of 13
66794	tryptophan metabolism	60.53	23 of 38
66794	myo-inositol biosynthesis	60	6 of 10
66794	lipoate biosynthesis	60	3 of 5
66794	gallate degradation	60	3 of 5
66794	glycogen metabolism	60	3 of 5
66794	propionate fermentation	60	6 of 10
66794	3-phenylpropionate degradation	60	9 of 15
66794	lysine metabolism	59.52	25 of 42
66794	histidine metabolism	58.62	17 of 29
66794	d-mannose degradation	55.56	5 of 9
66794	metabolism of disaccharids	54.55	6 of 11
66794	sulfate reduction	53.85	7 of 13
66794	isoprenoid biosynthesis	53.85	14 of 26
66794	kanosamine biosynthesis II	50	1 of 2
66794	ribulose monophosphate pathway	50	1 of 2
66794	glycine metabolism	50	5 of 10
66794	coenzyme M biosynthesis	50	5 of 10
66794	sulfopterin metabolism	50	2 of 4
66794	phenylmercury acetate degradation	50	1 of 2
66794	selenocysteine biosynthesis	50	3 of 6
66794	degradation of aromatic, nitrogen containing compounds	50	6 of 12
66794	mannosylglycerate biosynthesis	50	1 of 2
66794	pantothenate biosynthesis	50	3 of 6
66794	degradation of hexoses	50	9 of 18
66794	carnitine metabolism	50	4 of 8
66794	dTDPLrhamnose biosynthesis	50	4 of 8
66794	ethanol fermentation	50	1 of 2
66794	tyrosine metabolism	50	7 of 14
66794	degradation of pentoses	46.43	13 of 28
66794	d-xylose degradation	45.45	5 of 11
66794	phenol degradation	45	9 of 20
66794	arachidonic acid metabolism	44.44	8 of 18
66794	nitrate assimilation	44.44	4 of 9
66794	phenylacetate degradation (aerobic)	40	2 of 5
66794	arachidonate biosynthesis	40	2 of 5
66794	metabolism of amino sugars and derivatives	40	2 of 5
66794	creatinine degradation	40	2 of 5
66794	ascorbate metabolism	36.36	8 of 22
66794	sphingosine metabolism	33.33	2 of 6
66794	methane metabolism	33.33	1 of 3
66794	IAA biosynthesis	33.33	1 of 3
66794	acetyl CoA biosynthesis	33.33	1 of 3
66794	sulfoquinovose degradation	33.33	1 of 3
66794	enterobactin biosynthesis	33.33	1 of 3
66794	(5R)-carbapenem carboxylate biosynthesis	33.33	1 of 3
66794	starch degradation	30	3 of 10
66794	4-hydroxyphenylacetate degradation	30	3 of 10
66794	bile acid biosynthesis, neutral pathway	29.41	5 of 17
66794	benzoyl-CoA degradation	28.57	2 of 7
66794	glycogen biosynthesis	25	1 of 4
66794	vitamin E metabolism	25	1 of 4
66794	lactate fermentation	25	1 of 4
66794	toluene degradation	25	1 of 4
66794	androgen and estrogen metabolism	25	4 of 16

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Condition	#Alkaline	-
#Condition	#Saline	-
#Environmental	#Aquatic	#Lake (large)
#Environmental	#Aquatic	#Sediment

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
43650	a combined water and sediment sample from a saline-alkaline lake	Urumqi City, Xinjiang Uyghur Autonomous Region	China	CHN	Asia
67770	Saline-alkaline lake in the Xinjiang Uyghur Autonomous Region of China

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM1465313v1 assembly for Halomonas urumqiensis CGMCC 1.12917	scaffold	GCA_014653135	1684789.7		1684789	72.28
67770	ASM287963v1 assembly for Halomonas urumqiensis BZ-SZ-XJ27	scaffold	GCA_002879635	1684789.4	2856149634	1684789	71.16

16S sequences

@ref	Description	Accession	Database
43650	Halomonas urumqiensis strain BZ-SZ-XJ27 16S ribosomal RNA gene, partial sequence	KM066108

GC content

@ref	GC-content (mol%)	Method
43650	61.7	thermal denaturation, midpoint method (Tm)

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM1465313v1 assembly for Halomonas urumqiensis CGMCC 1.12917
NCBI: GCA_014653135

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	facultative anaerobe	89.96	no
125439	gram_stain	BacteriaNetⓘ	negative	90.73	no
125439	motility	BacteriaNetⓘ	yes	82.75	no
125439	spore_formation	BacteriaNetⓘ	no	99.62	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Halomonas urumqiensis CGMCC 1.12917
NCBI: GCA_014653135.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	100.00	no
125438	anaerobic	anaerobicⓘ	no	96.75	yes
125438	aerobic	aerobicⓘ	yes	84.53	yes
125438	spore-forming	spore-formingⓘ	no	90.57	no
125438	thermophilic	thermophileⓘ	no	99.00	yes
125438	flagellated	motile2+ⓘ	yes	85.37	yes

Literature

Topic	Title	Authors	Journal	DOI	Year
	International Committee on Systematics of Prokaryotes Subcommittee on the taxonomy of Halobacteria and Subcommittee on the taxonomy of Halomonadaceae. Minutes of the joint open meeting, 11 July 2017, Valencia, Spain.	Arahal DR, Oren A, Ventosa A.	Int J Syst Evol Microbiol	10.1099/ijsem.0.002296	2017
Phylogeny	Halomonas endophytica sp. nov., isolated from liquid in the stems of Populus euphratica.	Chen C, Anwar N, Wu C, Fu G, Wang R, Zhang C, Wu Y, Sun C, Wu M	Int J Syst Evol Microbiol	10.1099/ijsem.0.002585	2018
Phylogeny	Halomonas urumqiensis sp. nov., a moderately halophilic bacterium isolated from a saline-alkaline lake.	Zhang S, Pan J, Lu W, Yan Y, Wang H, Wiegel J, Zhao B	Int J Syst Evol Microbiol	10.1099/ijsem.0.000975	2016

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#43650	Shanshan Zhang, Jiao Pan, Weidong Lu, Yanchun Yan, Haisheng Wang, Jurgen Wiegel, Baisuo Zhao: Halomonas urumqiensis sp. nov., a moderately halophilic bacterium isolated from a saline-alkaline lake. IJSEM 66: 1962 - 1969 2016 ( DOI 10.1099/ijsem.0.000975 , PubMed 26873696 )
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#66794	Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Halomonas urumqiensis (JCM 30202, CGMCC 1.12917, DSM 29014)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Culture and growth conditions

Culture medium

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Spore formation

Halophily

Observation

Metabolite utilization

Antibiotic resistance

Metabolite production

Metabolite tests

Enzymes

Pathway annotation

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Sequence information

Genome sequences

Genome browser: GCA_014653135

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

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