Name: Kordia ulvae KCTC 42872
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 140820

Type strain:

Species: Kordia ulvae

Culture col. no.: KCTC 42872, MCCC 1A01772, LMG 29123, SC 2

Strain history: <- Zhaobin Huang and Qiliang Lai, Third institue of Oceanography, State Oceanic Administraion(SOA), China

NCBI tax ID(s): 1781072 (species)

Section

Kordia ulvae KCTC 42872 is an aerobe, Gram-negative, rod-shaped bacterium that forms circular colonies and was isolated from the surface of a green marine alga collected from coastal regions.

colony-forming
Gram-negative
rod-shaped
aerobe
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacteroidota*
	Class	*Flavobacteriia*
	Order	*Flavobacteriales*
	Family	*Flavobacteriaceae*
	Genus	*Kordia*
	Species	**Kordia ulvae**
	Full Scientific Name (LPSN)	Kordia ulvae Qi et al. 2016

Information on morphological and physiological properties Morphology

[Ref.: #43610]	Gram stain	negative
[Ref.: #67771]	Gram stain	negative

[Ref.: #43610]	Cell length	2.2-3.5 µm

[Ref.: #43610]	Cell width	0.4 µm

[Ref.: #43610]	Cell shape	rod-shaped
[Ref.: #67771]	Cell shape	rod-shaped

[Ref.: #43610]	Motility	no

[Ref.: #43610]	Colony color	Yellow
[Ref.: #43610]	Colony shape	circular
[Ref.: #43610]	Incubation period	2 days
[Ref.: #43610]	Cultivation medium used	MA plates

Information on culture and growth conditions Culture and growth conditions

[Ref.: #43610]

Culture medium

MA plates

[Ref.: #43610]

Culture medium growth

		Temperature
[Ref.: #43610]	growth	15-37 °C
[Ref.: #43610]	optimum	30 °C
[Ref.: #67771]	growth	30 °C

[Ref.: #43610]	Temperature range	mesophilic
[Ref.: #67771]	Temperature range	mesophilic

	pH	Kind of pH		pH
[Ref.: #43610]			optimum	8
[Ref.: #43610]			growth	7-9

Information on physiology and metabolism Physiology and metabolism

[Ref.: #43610]	Oxygen tolerance	aerobe
[Ref.: #67771]	Oxygen tolerance	aerobe

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #43610]		NaCl		growth	1-6	%(w/v)
[Ref.: #43610]		NaCl		optimum	2	%(w/v)

[Ref.: #67771]

Observation

quinones: MK-6

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #43610]	adipate ChEBI	-	assimilation
[Ref.: #43610]	agar ChEBI	+	hydrolysis
[Ref.: #43610]	amygdalin ChEBI	-	fermentation
[Ref.: #43610]	arabinose ChEBI	+	fermentation
[Ref.: #43610]	chitin ChEBI	-	hydrolysis
[Ref.: #43610]	citrate ChEBI	-	assimilation
[Ref.: #43610]	D-glucose ChEBI	-	assimilation
[Ref.: #43610]	D-glucose ChEBI	-	fermentation
[Ref.: #43610]	D-mannose ChEBI	-	assimilation
[Ref.: #43610]	decanoate ChEBI	-	assimilation
[Ref.: #43610]	gelatin ChEBI	+	hydrolysis
[Ref.: #43610]	malate ChEBI	-	assimilation
[Ref.: #43610]	maltose ChEBI	-	assimilation
[Ref.: #43610]	mannitol ChEBI	-	fermentation
[Ref.: #43610]	melibiose ChEBI	-	fermentation
[Ref.: #43610]	myo-inositol ChEBI	-	fermentation
[Ref.: #43610]	N-acetylglucosamine ChEBI	-	assimilation
[Ref.: #43610]	nitrate ChEBI	-	reduction
[Ref.: #43610]	phenylacetate ChEBI	-	assimilation
[Ref.: #43610]	potassium gluconate ChEBI	-	assimilation
[Ref.: #43610]	rhamnose ChEBI	-	fermentation
[Ref.: #43610]	skimmed milk	+	hydrolysis
[Ref.: #43610]	sorbitol ChEBI	-	fermentation
[Ref.: #43610]	starch ChEBI	+	hydrolysis
[Ref.: #43610]	sucrose ChEBI	-	fermentation
[Ref.: #43610]	tween 20 ChEBI	+	hydrolysis
[Ref.: #43610]	tween 80 ChEBI	+	hydrolysis
	Only first 10 entries are displayed. Click here to see all.

	Metabolite	Production
[Ref.: #43610]	acetoin ChEBI	yes
[Ref.: #43610]	hydrogen sulfide ChEBI	no
[Ref.: #43610]	indole ChEBI	no

	Physiological tests	Metabolite	Voges-Proskauer-test
[Ref.: #43610]		acetoin ChEBI	+

	Enzyme	Enzyme activity	EC number
[Ref.: #43610]	2-nitrophenyl beta-D-galactopyranoside	+	3.2.1.52
[Ref.: #43610]	acid phosphatase	+	3.1.3.2
[Ref.: #43610]	alkaline phosphatase	+	3.1.3.1
[Ref.: #43610]	alpha-chymotrypsin	-	3.4.21.1
[Ref.: #43610]	alpha-galactosidase	-	3.2.1.22
[Ref.: #43610]	alpha-glucosidase	-	3.2.1.20
[Ref.: #43610]	alpha-mannosidase	-	3.2.1.24
[Ref.: #43610]	arginine dihydrolase	+	3.5.3.6
[Ref.: #43610]	beta-D-fucosidase	-	3.2.1.38
[Ref.: #43610]	beta-galactosidase	-	3.2.1.23
[Ref.: #43610]	beta-glucosidase	-	3.2.1.21
[Ref.: #43610]	beta-glucuronidase	-	3.2.1.31
[Ref.: #43610]	catalase	+	1.11.1.6
[Ref.: #43610]	cystine arylamidase	-	3.4.11.3
[Ref.: #43610]	cytochrome oxidase	+	1.9.3.1
[Ref.: #43610]	esterase (C 4)	+
[Ref.: #43610]	esterase Lipase (C 8)	+
[Ref.: #43610]	gelatinase	+
[Ref.: #43610]	leucine arylamidase	+	3.4.11.1
[Ref.: #43610]	lipase (C 14)	-
[Ref.: #43610]	lysine decarboxylase	-	4.1.1.18
[Ref.: #43610]	N-acetyl-beta-glucosaminidase	-	3.2.1.52
[Ref.: #43610]	naphthol-AS-BI-phosphohydrolase	+
[Ref.: #43610]	ornithine decarboxylase	-	4.1.1.17
[Ref.: #43610]	trypsin	-	3.4.21.4
[Ref.: #43610]	tryptophan decarboxylase	-	4.1.1.27
[Ref.: #43610]	urease	+	3.5.1.5
[Ref.: #43610]	valine arylamidase	-
	Only first 10 entries are displayed. Click here to see all.

Fatty acid profile

Metadata FA analysis

Reference

[Ref.: #43610]

Fatty acid	Percentage
C18:1ω6c / C18:1ω7c	73.6
C16:0	7.5
11-methyl C18:1ω7c	6.5
C14:0 2OH	3.3
C18:0	2.8
C12:1 3OH	1.9
C16:1ω6c / C16:1ω7c	1.3
10-methyl C19:0	1.1
C16:0 2OH	1.1
C10:0 3OH	1

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #43610]	Sample type/isolated from	the surface of a green marine alga (Ulva sp.) collected from coastal regions
[Ref.: #43610]	Geographic location (country and/or sea, region)	Dadeng Island, Xiamen, Fujian province
[Ref.: #43610]	Country	China
[Ref.: #43610]	Country ISO 3 Code	CHN
[Ref.: #43610]	Continent	Asia
[Ref.: #43610]	Isolation date	2015-04

[Ref.: #67771]	Sample type/isolated from	From the surface of a green marine Ulvacean alga, `Ulva` sp.
[Ref.: #67771]	Geographic location (country and/or sea, region)	coastal regions in Dadeng island, Xiamen, Fujian Province
[Ref.: #67771]	Country	China
[Ref.: #67771]	Country ISO 3 Code	CHN
[Ref.: #67771]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	#Marine
#Environmental	#Terrestrial	#Coast
#Host	#Algae	#Green algae

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence KT589975 (>99% sequence identity) for Kordia from Microbeatlas

Aquatic Samples	40
Soil Samples
Animal Samples	1
Plant Samples	5
Total Samples	46

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #43610]	16S rRNA gene sequence	KT589975		GenBank

[Ref.: #43610]	GC-content	34.5 mol%	genome sequence analysis
[Ref.: #67771]	GC-content	34.5 mol%

Availability in culture collections External links

[Ref.: #43610]

Culture collection no.

KCTC 42872, MCCC 1A01772, LMG 29123, SC 2

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Kordia zosterae sp. nov., isolated from the seaweed, Zostera marina.	Kim DI, Lee JH, Kim MS, Seong CN	Int J Syst Evol Microbiol	10.1099/ijsem.0.002379	2017	*
Phylogeny	Kordiaulvae sp. nov., a bacterium isolated from the surface of green marine algae Ulva sp.	Qi F, Huang Z, Lai Q, Li D, Shao Z	Int J Syst Evol Microbiol	10.1099/ijsem.0.001098	2016	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#43610

Feng Qi, Zhaobin Huang, Qiliang Lai, Dengfeng Li, Zongze Shao: Kordia ulvae sp. nov., a bacterium isolated from the surface of green marine algae Ulva sp.. IJSEM 66: 2623 - 2628 2016 ( DOI 10.1099/ijsem.0.001098 , PubMed 27098380 )

#67771 Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

* These data were automatically processed and therefore are not curated

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