Name: Nocardioides litorisoli x-2
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 140786

Type strain:

Species: Nocardioides litorisoli

Strain Designation: x-2

Culture col. no.: KCTC 39845, CCTCC AB 2016255

Strain history: <- Yu Wang, Huazhong Agricultural Univ.

NCBI tax ID(s): 1924938 (species)

Section

Nocardioides litorisoli x-2 is an obligate aerobe, Gram-positive, rod-shaped bacterium that forms circular colonies and was isolated from lakeside soil of Sayram.

colony-forming
Gram-positive
rod-shaped
obligate aerobe
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Propionibacteriales*
	Family	*Nocardioidaceae*
	Genus	*Nocardioides*
	Species	**Nocardioides litorisoli**
	Full Scientific Name (LPSN)	Nocardioides litorisoli Wang et al. 2017

Information on morphological and physiological properties Morphology

[Ref.: #43564]	Gram stain	positive

[Ref.: #43564]	Cell length	1.2-2.2 µm

[Ref.: #43564]	Cell width	0.4-0.5 µm

[Ref.: #43564]	Cell shape	rod-shaped

[Ref.: #43564]	Motility	no

[Ref.: #43564]	Colony color	light white
[Ref.: #43564]	Colony shape	circular
[Ref.: #43564]	Incubation period	5 days
[Ref.: #43564]	Cultivation medium used	R2A agar

Information on culture and growth conditions Culture and growth conditions

[Ref.: #43564]

Culture medium

Reasoner's 2A agar (R2A)

[Ref.: #43564]

Culture medium growth

		Temperature
[Ref.: #43564]	growth	16-37 °C
[Ref.: #43564]	optimum	28 °C
[Ref.: #67771]	growth	28 °C

[Ref.: #43564]	Temperature range	mesophilic
[Ref.: #67771]	Temperature range	mesophilic

	pH	Kind of pH		pH
[Ref.: #43564]			optimum	8
[Ref.: #43564]			growth	6-9

Information on physiology and metabolism Physiology and metabolism

[Ref.: #43564]	Oxygen tolerance	obligate aerobe
[Ref.: #67771]	Oxygen tolerance	aerobe

[Ref.: #43564]

Ability of spore formation

[Ref.: #43564]

Halophily / tolerance level

non-halophilic

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #43564]		NaCl		growth	0-1	%(w/v)
[Ref.: #43564]		NaCl		optimum	0	%(w/v)

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #43564]	5-dehydro-D-gluconate ChEBI	+	builds acid from
[Ref.: #43564]	benzoate ChEBI	-	assimilation
[Ref.: #43564]	casein	-	hydrolysis
[Ref.: #43564]	cellulose ChEBI	-	hydrolysis
[Ref.: #43564]	citrate ChEBI	-	assimilation
[Ref.: #43564]	D-mannitol ChEBI	+	assimilation
[Ref.: #43564]	D-mannose ChEBI	+	assimilation
[Ref.: #43564]	D-ribose ChEBI	-	assimilation
[Ref.: #43564]	D-ribose ChEBI	+	builds acid from
[Ref.: #43564]	D-xylose ChEBI	+	builds acid from
[Ref.: #43564]	dna ChEBI	+	hydrolysis
[Ref.: #43564]	fructose ChEBI	+	builds acid from
[Ref.: #43564]	galactose ChEBI	-	assimilation
[Ref.: #43564]	gelatin ChEBI	-	hydrolysis
[Ref.: #43564]	glucose ChEBI	+	builds acid from
[Ref.: #43564]	glucose ChEBI	+	fermentation
[Ref.: #43564]	hypoxanthine ChEBI	-	hydrolysis
[Ref.: #43564]	L-arabinose ChEBI	+	builds acid from
[Ref.: #43564]	L-rhamnose ChEBI	-	assimilation
[Ref.: #43564]	starch ChEBI	-	hydrolysis
[Ref.: #43564]	sucrose ChEBI	+	builds acid from
[Ref.: #43564]	trehalose ChEBI	+	assimilation
[Ref.: #43564]	tween 20 ChEBI	-	hydrolysis
[Ref.: #43564]	tween 40 ChEBI	-	hydrolysis
[Ref.: #43564]	tween 60 ChEBI	-	hydrolysis
[Ref.: #43564]	tween 80 ChEBI	-	hydrolysis
[Ref.: #43564]	tyrosine ChEBI	+	hydrolysis
[Ref.: #43564]	xanthine ChEBI	+	hydrolysis
	Only first 10 entries are displayed. Click here to see all.

	Metabolite production	Metabolite	Production
[Ref.: #43564]		hydrogen sulfide ChEBI	yes

	Enzyme	Enzyme activity	EC number
[Ref.: #43564]	acid phosphatase	+/-	3.1.3.2
[Ref.: #43564]	alkaline phosphatase	+	3.1.3.1
[Ref.: #43564]	alpha-glucosidase	+	3.2.1.20
[Ref.: #43564]	amylase	-
[Ref.: #43564]	catalase	+	1.11.1.6
[Ref.: #43564]	chymotrypsin	+	3.4.4.5
[Ref.: #43564]	cystine arylamidase	+	3.4.11.3
[Ref.: #43564]	cytochrome oxidase	-	1.9.3.1
[Ref.: #43564]	esterase (C 4)	+
[Ref.: #43564]	esterase Lipase (C 8)	+
[Ref.: #43564]	gelatinase	-
[Ref.: #43564]	leucine arylamidase	+	3.4.11.1
[Ref.: #43564]	naphthol-AS-BI-phosphohydrolase	+/-
[Ref.: #43564]	trypsin	+	3.4.21.4
[Ref.: #43564]	urease	-	3.5.1.5
[Ref.: #43564]	valine arylamidase	+
	Only first 10 entries are displayed. Click here to see all.

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #43564]	Sample type/isolated from	lakeside soil of Sayram
[Ref.: #43564]	Geographic location (country and/or sea, region)	North Tianchan Mountains of Bole City, Xinjiang Uygur Abutonomous Region
[Ref.: #43564]	Country	China
[Ref.: #43564]	Country ISO 3 Code	CHN
[Ref.: #43564]	Continent	Asia
[Ref.: #43564]	Geographic location	44.4930°/80.9930°

[Ref.: #67771]	Sample type/isolated from	From soil
[Ref.: #67771]	Geographic location (country and/or sea, region)	North Tianshan Mountains of Bole city Xinjiang province
[Ref.: #67771]	Country	China
[Ref.: #67771]	Country ISO 3 Code	CHN
[Ref.: #67771]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	#Lake (large)
#Environmental	#Terrestrial	#Soil

What are isolation sources categories?

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #43564]	16S rRNA gene sequence	KY287237		GenBank

[Ref.: #43564]

GC-content

71.1 mol%

high performance liquid chromatography (HPLC)

Availability in culture collections External links

[Ref.: #43564]

Culture collection no.

KCTC 39845, CCTCC AB 2016255

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Nocardioides litorisoli sp. nov., isolated from lakeside soil.	Wang Y, Xu D, Luo A, Wang G, Zheng S	Int J Syst Evol Microbiol	10.1099/ijsem.0.002283	2017	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#43564

Yu Wang, Ding Xu, Anna Luo, Gejiao Wang, Shixue Zheng: Nocardioides litorisoli sp. nov., isolated from lakeside soil. IJSEM 67: 4216 - 4220 2017 ( DOI 10.1099/ijsem.0.002283 , PubMed 29022545 )

#67771 Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;
* These data were automatically processed and therefore are not curated

Change proposal

You found an error in BacDive? Please tell us about it!

Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.

Search for species Nocardioides litorisoli in external resources:
SILVA
BRENDA
PANGAEA
StrainInfo
GBIF