Paenibacillus aurantiacus (KCTC 33816, LMG 29659, TISTR 2452)

Name: Paenibacillus aurantiacus (KCTC 33816, LMG 29659, TISTR 2452)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 140714

Type strain

Strain Designation RC11

Culture col. no. KCTC 33816 LMG 29659 TISTR 2452 RC11 JCM 32623

NCBI tax ID(s) 1936118

Special Collections JCM KCTC Literature strains

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Paenibacillus aurantiacus RC11 is an aerobe, spore-forming, Gram-positive prokaryote that forms circular colonies and was isolated from ant nest soil sample.

spore-forming Gram-positive rod-shaped colony-forming aerobe genome sequence 16S sequence

Name and taxonomic classification

SI-ID 271603

LMG 29659,KCTC 33816

@ref 20215

Last LPSN update 2025-12-16 10:03:40

Domain Bacillati

Phylum Bacillota

Class Bacilli

Order Caryophanales

Family Paenibacillaceae

Genus Paenibacillus

Species Paenibacillus aurantiacus

Full scientific name Paenibacillus aurantiacus Wasoontharawat et al. 2017

Morphology

Cell morphology

@ref	Gram stain	Cell length	Cell width	Cell shape
43489	positive	2.1-3.7 µm	0.6-0.9 µm	rod-shaped
67771				rod-shaped
67771	positive

Colony morphology

@ref	Colony color	Colony shape	Incubation period	Medium used
43489	whitisch-orange	circular	2 days	TSA agar

Culture and growth conditions

Culture medium

@ref	Name	Growth
43489	Trypticase Soy Agar (TSA)

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
43489	positive	growth	20-40
43489	negative	growth	45
43489	positive	optimum	30-37	mesophilic
67770	positive	growth	28	mesophilic
67771	positive	growth	30	mesophilic

Culture pH

@ref	Ability	Type	PH
43489	positive	optimum	7-7.5
43489	positive	growth	6-8
43489		growth	5.5

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance
43489	aerobe
67771	aerobe

Spore formation

@ref	Spore description	Type of spore	Spore formation
43489	subterminal, observed in swollen sporangia	endospore

Halophily

@ref	Salt	Growth	Tested relation	Concentration
43489	NaCl	positive	growth	0-2 %(w/v)

Observation

@ref	Observation
67770	quinones: MK-7
67771	quinones: MK-7

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
43489	58143 ChEBI	5-dehydro-D-gluconate	+/-	builds acid from
43489	29016 ChEBI	arginine	+	hydrolysis
43489	17108 ChEBI	D-arabinose	+	builds acid from
43489	17634 ChEBI	D-glucose	+	builds acid from
43489	4853 ChEBI	esculin	+	hydrolysis
43489	5291 ChEBI	gelatin	-	hydrolysis
43489	17234 ChEBI	glucose	-	fermentation
43489	18287 ChEBI	L-fucose	+	builds acid from
43489	17716 ChEBI	lactose	+	builds acid from
43489	6731 ChEBI	melezitose	+	builds acid from
43489	43943 ChEBI	methyl alpha-D-mannoside	+	builds acid from
43489	17632 ChEBI	nitrate	+	reduction
43489	33942 ChEBI	ribose	+/-	builds acid from
43489	28017 ChEBI	starch	+	hydrolysis
43489	17992 ChEBI	sucrose	+	builds acid from
43489	53426 ChEBI	tween 80	-	hydrolysis
43489	17151 ChEBI	xylitol	+/-	builds acid from

Antibiotic resistance

@ref	ChEBI	Metabolite	Resistance conc.
43489	28971	ampicillin	10 µg
43489	28669	bacitracin	10 µg
43489	17698	chloramphenicol	30 µg
43489	27902	tetracycline	30 µg

Metabolite production

@ref	Chebi-ID	Metabolite	Production
43489	15688 ChEBI	acetoin
43489	35581 ChEBI	indole

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test	Methylred-test
43489	15688 ChEBI	acetoin	-
43489	17234 ChEBI	glucose		-

Enzymes

@ref	Value	Activity	Ec
43489	catalase	+	1.11.1.6
43489	cytochrome oxidase	+	1.9.3.1
43489	urease	-	3.5.1.5

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Terrestrial	#Soil

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
43489	ant nest soil sample	Ban Dung district, Udon Thani Province	Thailand	THA	Asia
67770	Ant nest soil collected from Udon Thani Province		Thailand	THA	Asia
67771	From ant nest	Udon Thani Province	Thailand	THA	Asia

Taxonmaps

69479

Global distribution of 16S sequence LC210810 (>99% sequence identity) for Paenibacillus from Microbeatlas

Aquatic Samples	1
Soil Samples	99
Animal Samples	5
Plant Samples	6
Total Samples	111

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	NCBI tax ID	Score
124043	ASM4243122v1 assembly for Paenibacillus aurantiacus TISTR 2452	scaffold	GCA_042431225	1936118	65.42

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
43489	Paenibacillus aurantiacus gene for 16S ribosomal RNA, partial sequence	LC210810
124043	Paenibacillus aurantiacus strain TISTR 2452 16S ribosomal RNA gene, partial sequence.	MT760661	1388		1936118

GC content

@ref	GC-content (mol%)	Method
43489	57.9
67770	57.9	high performance liquid chromatography (HPLC)

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
	Paenibacillus spongiae sp. nov. isolated from deep-water marine sponge Theonella swinhoei.	Zhang M, Song Q, Sang J, Li Z.	Int J Syst Evol Microbiol	10.1099/ijsem.0.006122	2023
Phylogeny	Paenibacillus aurantiacus sp. nov., isolated from ant nest soil.	Wasoontharawat M, Phongsopitanun W, Siriudom S, Tanasupawat S	Int J Syst Evol Microbiol	10.1099/ijsem.0.002088	2017

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#43489	Metinee Wasoontharawat, Wongsakorn Phongsopitanun, Sakutala Siriudom, Somboon Tanasupawat: Paenibacillus aurantiacus sp. nov., isolated from ant nest soil. IJSEM 67: 3226 - 3230 2017 ( DOI 10.1099/ijsem.0.002088 , PubMed 28829031 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#67771	Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Paenibacillus aurantiacus (KCTC 33816, LMG 29659, TISTR 2452)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Culture and growth conditions

Culture medium

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Spore formation

Halophily

Observation

Metabolite utilization

Antibiotic resistance

Metabolite production

Metabolite tests

Enzymes

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Sequence information

Genome sequences

Genome browser: GCA_042431225

16S sequences

GC content

Genome-based predictions

Literature

Literature

References

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