Laceyella thermophila (CCTC AB 2015040, NBRC 110772, YIM 79486)

Name: Laceyella thermophila (CCTC AB 2015040, NBRC 110772, YIM 79486)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 140689

Type strain

Culture col. no. CCTC AB 2015040 NBRC 110772 YIM 79486 DSM 46882 CCTCC AB 2015040 2 more

NCBI tax ID(s) 1644115

Special Collections DSMZ JCM Literature strains

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Laceyella thermophila CCTC AB 2015040 is an aerobe, spore-forming, Gram-positive prokaryote that was isolated from sediment sample collected from Jinze hot spring.

spore-forming Gram-positive aerobe 16S sequence

Name and taxonomic classification

SI-ID 403481

JCM 30657,NBRC 110772,DSM 46882

@ref 20215

Last LPSN update 2025-12-16 10:03:39

Domain Bacillati

Phylum Bacillota

Class Bacilli

Order Caryophanales

Family Thermoactinomycetaceae

Genus Laceyella

Species Laceyella thermophila

Full scientific name Laceyella thermophila Ming et al. 2017

Morphology

Cell morphology

43458

Gram stainpositive

Colony morphology

@ref	Incubation period	Medium used
43458	7 days	T5 agar

Multimedia

@ref:	66517
multimedia content:	DSM_46882.jpg
multimedia.multimedia content:	https://www.dsmz.de/microorganisms/photos/DSM_46882.jpg
caption:	Medium 65 50°C
intellectual property rights:	© Leibniz-Institut DSMZ
manual_annotation:	1

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
43458	T5 agar
66517	GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)	Medium recipe at MediaDive	Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water
66517	NUTRIENT AGAR (DSMZ Medium 1)	Medium recipe at MediaDive	Name: NUTRIENT AGAR (DSMZ Medium 1) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
43458	positive	growth	37-65
43458	positive	optimum	50	thermophilic
66517	positive	growth	50	thermophilic
67770	positive	growth	45	thermophilic

Culture pH

@ref	Ability	Type	PH
43458	positive	optimum	7-7.5
43458	positive	growth	6-8

Physiology and metabolism

Oxygen tolerance

43458

Oxygen toleranceaerobe

Spore formation

@ref	Spore description	Type of spore	Spore formation
43458	terminally located, produced on short sporophores	endospore

Halophily

@ref	Halophily level	Salt	Growth	Tested relation	Concentration
43458		NaCl	positive	growth	0-0.5 %(w/v)
43458	non-halophilic	NaCl	positive	optimum	0 %(w/v)

Observation

67770

Observationquinones: MK-9, MK-8

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
43458	64552 ChEBI	2-hydroxybutyrate	-	carbon source
43458	16763 ChEBI	2-oxobutanoate	-	carbon source
43458	30916 ChEBI	2-oxoglutarate	+	carbon source
43458	37054 ChEBI	3-hydroxybutyrate	-	carbon source
43458	73918 ChEBI	3-O-methyl-D-glucose	-	carbon source
43458	18101 ChEBI	4-hydroxyphenylacetic acid	-	carbon source
43458	30089 ChEBI	acetate	-	carbon source
43458	13705 ChEBI	acetoacetate	+	carbon source
43458	73706 ChEBI	bromosuccinate	-	carbon source
43458		casein	-	degradation
43458	17057 ChEBI	cellobiose	-	carbon source
43458	62968 ChEBI	cellulose	-	degradation
43458	16947 ChEBI	citrate	-	carbon source
43458	18333 ChEBI	D-arabitol	-	carbon source
43458	15824 ChEBI	D-fructose	+	carbon source
43458	78697 ChEBI	D-fructose 6-phosphate	+	carbon source
43458	28847 ChEBI	D-fucose	+	carbon source
43458	12936 ChEBI	D-galactose	+	carbon source
43458	18024 ChEBI	D-galacturonic acid	+	carbon source
43458	8391 ChEBI	D-gluconate	-	carbon source
43458	17634 ChEBI	D-glucose	+	carbon source
43458	14314 ChEBI	D-glucose 6-phosphate	-	carbon source
43458	15748 ChEBI	D-glucuronate	+	carbon source
43458	16899 ChEBI	D-mannitol	-	carbon source
43458	16024 ChEBI	D-mannose	+	carbon source
43458	33801 ChEBI	D-saccharate	-	carbon source
43458	16523 ChEBI	D-serine	-	nitrogen source
43458	17924 ChEBI	D-sorbitol	+	carbon source
43458	23652 ChEBI	dextrin	-	carbon source
43458	4853 ChEBI	esculin	+	hydrolysis
43458	15740 ChEBI	formate	-	carbon source
43458	16537 ChEBI	galactarate	-	carbon source
43458	16865 ChEBI	gamma-aminobutyric acid	-	carbon source
43458	5291 ChEBI	gelatin	+	hydrolysis
43458	28066 ChEBI	gentiobiose	+	carbon source
43458	32323 ChEBI	glucuronamide	+	nitrogen source
43458	17754 ChEBI	glycerol	-	carbon source
43458	15428 ChEBI	glycine	-	nitrogen source
43458	70744 ChEBI	glycine-proline	+	nitrogen source
43458	17596 ChEBI	inosine	-	carbon source
43458	16977 ChEBI	L-alanine	+	nitrogen source
43458	16467 ChEBI	L-arginine	+	nitrogen source
43458	17196 ChEBI	L-asparagine	+	nitrogen source
43458	16283 ChEBI	L-cystine	-	nitrogen source
43458	18287 ChEBI	L-fucose	+	carbon source
43458	17464 ChEBI	L-galactonic acid gamma-lactone	+	carbon source
43458	29985 ChEBI	L-glutamate	-	nitrogen source
43458	15971 ChEBI	L-histidine	-	nitrogen source
43458	17191 ChEBI	L-isoleucine	-	nitrogen source
43458	18019 ChEBI	L-lysine	-	nitrogen source
43458	16643 ChEBI	L-methionine	-	nitrogen source
43458	17295 ChEBI	L-phenylalanine	-	nitrogen source
43458	17203 ChEBI	L-proline	+	nitrogen source
43458	18183 ChEBI	L-pyroglutamic acid	-	nitrogen source
43458	62345 ChEBI	L-rhamnose	+	carbon source
43458	17115 ChEBI	L-serine	-	nitrogen source
43458	16857 ChEBI	L-threonine	-	nitrogen source
43458	17895 ChEBI	L-tyrosine	-	nitrogen source
43458	90608 ChEBI	L-valine 2-naphthylamide	+	nitrogen source
43458	24996 ChEBI	lactate	-	carbon source
43458	17716 ChEBI	lactose	-	carbon source
43458	25115 ChEBI	malate	-	carbon source
43458	17306 ChEBI	maltose	+	carbon source
43458	28053 ChEBI	melibiose	+	carbon source
43458	74611 ChEBI	methyl (R)-lactate	-	carbon source
43458	37657 ChEBI	methyl D-glucoside	-	carbon source
43458	17268 ChEBI	myo-inositol	-	carbon source
43458	63154 ChEBI	N-acetyl-beta-D-mannosamine	-	nitrogen source
43458	28037 ChEBI	N-acetylgalactosamine	-	nitrogen source
43458	506227 ChEBI	N-acetylglucosamine	-	nitrogen source
43458	35418 ChEBI	n-acetylneuraminate	-	nitrogen source
43458	17632 ChEBI	nitrate	-	reduction
43458	17309 ChEBI	pectin	+	hydrolysis
43458	17272 ChEBI	propionate	-	carbon source
43458	15361 ChEBI	pyruvate	+	carbon source
43458	26490 ChEBI	quinate	-	carbon source
43458	16634 ChEBI	raffinose	-	carbon source
43458	17814 ChEBI	salicin	-	carbon source
43458	17164 ChEBI	stachyose	-	carbon source
43458	17992 ChEBI	sucrose	-	carbon source
43458	27082 ChEBI	trehalose	-	carbon source
43458	32528 ChEBI	turanose	+	carbon source
43458	53424 ChEBI	tween 20	-	degradation
43458	53423 ChEBI	tween 40	-	degradation
43458	53425 ChEBI	tween 60	-	degradation
43458	53426 ChEBI	tween 80	-	degradation
43458	16199 ChEBI	urea	+	hydrolysis
43458	37166 ChEBI	xylan	-	degradation

Metabolite production

@ref	Chebi-ID	Metabolite	Production
43458	16136 ChEBI	hydrogen sulfide

Enzymes

@ref	Value	Activity	Ec
43458	acid phosphatase	-	3.1.3.2
43458	alkaline phosphatase	+	3.1.3.1
43458	alpha-chymotrypsin	-	3.4.21.1
43458	alpha-galactosidase	-	3.2.1.22
43458	alpha-glucosidase	-	3.2.1.20
43458	alpha-mannosidase	-	3.2.1.24
43458	beta-D-fucosidase	-	3.2.1.38
43458	beta-galactosidase	-	3.2.1.23
43458	beta-glucosidase	-	3.2.1.21
43458	beta-glucuronidase	-	3.2.1.31
43458	cystine arylamidase	-	3.4.11.3
43458	esterase (C 4)	+
43458	esterase Lipase (C 8)	-
43458	leucine arylamidase	-	3.4.11.1
43458	lipase (C 14)	-
43458	N-acetyl-beta-glucosaminidase	-	3.2.1.52
43458	naphthol-AS-BI-phosphohydrolase	+
43458	trypsin	-	3.4.21.4
43458	urease	+	3.5.1.5
43458	valine arylamidase	-

Fatty acid profile

Metadata FA analysis

@ref

43458

Fatty acid	Percentage
C15:0 iso	26.4
C15:0 anteiso	23.2
C17:0 iso	15.9
C17:0 anteiso	13.4
C16:0	5.7
C16:0 iso	5.1
C18:0	3.4
C18:1ω7c / C18:1ω6c	2.3
C15:0 iso 3OH	2
C14:0	1
C14:0 iso	0.8

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Condition	#Thermophilic (>45°C)	-
#Environmental	#Aquatic	#Sediment
#Environmental	#Aquatic	#Thermal spring

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent	Latitude	Longitude
43458	sediment sample collected from Jinze hot spring	Tengchong county, Yunnan province	China	CHN	Asia	25.433	98.45 25.433/98.45
67770	Sediment from Jinze hot spring in Tengchong County	Yunnan Province, south-west China	China	CHN	Asia
66517	hot spring sediment		China	CHN	Asia

Taxonmaps

69479

Global distribution of 16S sequence KP232927 (>99% sequence identity) for Laceyella thermophila from Microbeatlas

Aquatic Samples	52
Soil Samples	89
Animal Samples	156
Plant Samples	33
Total Samples	330

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	IMG accession	NCBI tax ID	Score
66792	Laceyella thermophila YIM 79486	complete	2784132171	1644115	83.63

16S sequences

@ref	Description	Accession	Database
43458	Laceyella thermophila strain YIM 79486 16S ribosomal RNA gene, partial sequence	KP232927

GC content

@ref	GC-content (mol%)	Method
67770	47.8	high performance liquid chromatography (HPLC)

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Laceyella thermophila sp. nov., a thermophilic bacterium isolated from a hot spring.	Ming H, Ji WL, Li S, Zhao ZL, Zhang LY, Meng XL, Zhou EM, Nie GX, Li WJ	Int J Syst Evol Microbiol	10.1099/ijsem.0.002057	2017

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#43458	Hong Ming, Wei-Li Ji, Shuai Li, Zhuo-Li Zhao, Ling-Yu Zhang, Xiao-Lin Meng, En-Min Zhou, Guo-Xing Nie, Wen-Jun Li: Laceyella thermophila sp. nov., a thermophilic bacterium isolated from a hot spring. IJSEM 67: 2953 - 2958 2017 ( DOI 10.1099/ijsem.0.002057 , PubMed 28820123 )
#66517	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 46882
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Laceyella thermophila (CCTC AB 2015040, NBRC 110772, YIM 79486)

Name and taxonomic classification