Bacillus coagulans (ATCC 5827, 36D1)

Name: Bacillus coagulans (ATCC 5827, 36D1)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 140654

Type strain

Strain Designation 36D1

Culture col. no. ATCC 5827 36D1

NCBI tax ID(s) 1398

Special Collections Literature strains

Bacillus coagulans 36D1 is a bacterium of the family Bacillaceae.

genome sequence Bacteria

Name and taxonomic classification

Culture Collection Numbers

ATCC 5827 36D1

@ref 20215

Last LPSN update 2026-05-29 08:39:46

Domain Bacteria

Phylum Bacillota

Class Bacilli

Order Caryophanales

Family Bacillaceae

Genus Bacillus

Species Bacillus coagulans

Full scientific name Bacillus coagulans Hammer 1915 (Approved Lists 1980)

Synonyms (2)

Weizmannia coagulans
Heyndrickxia coagulans

BacDive ID	Other strains from **Bacillus coagulans** (3)	Type strain
136030	B. coagulans 963.85, CIP 102020
137618	B. coagulans CIP 51.34, CN 2821
147772	B. coagulans CCUG 34203

Morphology

Culture and growth conditions

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125439	facultative anaerobe	90.37

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
43419	62968 ChEBI	cellulose	-	degradation
43419	37166 ChEBI	xylan	-	degradation

Isolation, sampling and environmental information

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM16919v2 assembly for Heyndrickxia coagulans 36D1	complete	GCA_000169195	345219.8	2503242012	345219	98.4

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM16919v2 assembly for Heyndrickxia coagulans 36D1
NCBI: GCA_000169195

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	gram_stain	BacteriaNetⓘ	variable	60.83	no
125439	oxygen_tolerance	BacteriaNetⓘ	facultative anaerobe	90.37	no
125439	motility	BacteriaNetⓘ	yes	48.69	no
125439	spore_formation	BacteriaNetⓘ	yes	54.47	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Weizmannia coagulans 36D1 36D1
NCBI: GCA_000169195.2

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	78.49	no
125438	anaerobic	anaerobicⓘ	no	89.75	no
125438	aerobic	aerobicⓘ	yes	61.46	no
125438	spore-forming	spore-formingⓘ	yes	89.76	no
125438	thermophilic	thermophileⓘ	no	81.15	no
125438	flagellated	motile2+ⓘ	yes	78.45	no

Literature

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#43419	Mun Su Rhee, Brélan E. Moritz, Gary Xie, T. Glavina del Rio, E. Dalin, H. Tice, D. Bruce, L. Goodwin, O. Chertkov, T. Brettin, C. Han, C. Detter, S. Pitluck, Miriam L. Land, Milind Patel, Mark Ou, Roberta Harbrucker, Lonnie O. Ingram and K. T. Shanmugam: Complete Genome Sequence of a thermotolerant sporogenic lactic acid bacterium, Bacillus coagulans strain 36D1. Stand Genomic Sci 5: 331 - 340 2011 ( DOI 10.4056/sigs.2365342 , PubMed 22675583 )
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .

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