Name: Pseudoalteromonas neustonica KCCM 43187
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 140626

Type strain:

Species: Pseudoalteromonas neustonica

Culture col. no.: KCCM 43187, JCM 31286, PAMC 28425

Strain history: C. Y. Hwang; KOPRI, South Korea; PAMC 28425.

NCBI tax ID(s): 1840331 (species)

Section

Pseudoalteromonas neustonica KCCM 43187 is a facultative anaerobe, mesophilic, Gram-negative bacterium that forms circular colonies and was isolated from Antarctic sea surface microlayer.

colony-forming
Gram-negative
motile
rod-shaped
facultative anaerobe
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Alteromonadales*
	Family	*Pseudoalteromonadaceae*
	Genus	*Pseudoalteromonas*
	Species	**Pseudoalteromonas neustonica**
	Full Scientific Name (LPSN)	Pseudoalteromonas neustonica Hwang et al. 2016

Information on morphological and physiological properties Morphology

[Ref.: #43151]	Gram stain	negative

[Ref.: #43151]	Cell length	1.3-4.0 µm

[Ref.: #43151]	Cell width	0.4-1.3 µm

[Ref.: #43151]	Cell shape	rod-shaped

[Ref.: #43151]	Motility	yes

[Ref.: #43151]	Flagellum arrangement	polar

[Ref.: #43151]	Colony size	1-2 mm
[Ref.: #43151]	Colony color	orange
[Ref.: #43151]	Colony shape	circular
[Ref.: #43151]	Incubation period	7 days
[Ref.: #43151]	Cultivation medium used	MA

Information on culture and growth conditions Culture and growth conditions

[Ref.: #43151]

Culture medium

Marine agar (MA)

[Ref.: #43151]

Culture medium growth

		Temperature
[Ref.: #43151]	optimum	25 °C
[Ref.: #43151]	growth	4-30 °C
[Ref.: #67770]	growth	25 °C

[Ref.: #43151]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

	pH	Kind of pH		pH
[Ref.: #43151]			optimum	7.5-8.5
[Ref.: #43151]			growth	6.0-9.0

Information on physiology and metabolism Physiology and metabolism

[Ref.: #43151]

Oxygen tolerance

facultative anaerobe

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #43151]		Marine salts		growth	1.0-7.0	%(w/v)
[Ref.: #43151]		Marine salts		optimum	1.0-3.0	%

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #43151]	2-dehydro-D-gluconate ChEBI	+	builds acid from
[Ref.: #43151]	5-dehydro-D-gluconate ChEBI	+	builds acid from
[Ref.: #43151]	acetate ChEBI	-	carbon source
[Ref.: #43151]	amygdalin ChEBI	-	builds acid from
[Ref.: #43151]	arbutin ChEBI	-	builds acid from
[Ref.: #43151]	casein	+	hydrolysis
[Ref.: #43151]	cellobiose ChEBI	-	builds acid from
[Ref.: #43151]	cellobiose ChEBI	-	carbon source
[Ref.: #43151]	citrate ChEBI	-	carbon source
[Ref.: #43151]	D-arabinose ChEBI	-	builds acid from
[Ref.: #43151]	D-arabitol ChEBI	+	builds acid from
[Ref.: #43151]	D-fructose ChEBI	+	builds acid from
[Ref.: #43151]	D-fructose ChEBI	-	carbon source
[Ref.: #43151]	D-fucose ChEBI	-	builds acid from
[Ref.: #43151]	D-galactose ChEBI	-	builds acid from
[Ref.: #43151]	D-galactose ChEBI	-	carbon source
[Ref.: #43151]	D-glucose ChEBI	+	builds acid from
[Ref.: #43151]	D-glucose ChEBI	-	carbon source
[Ref.: #43151]	D-lyxose ChEBI	-	builds acid from
[Ref.: #43151]	D-mannitol ChEBI	-	builds acid from
[Ref.: #43151]	D-mannose ChEBI	+	builds acid from
[Ref.: #43151]	D-mannose ChEBI	-	carbon source
[Ref.: #43151]	D-ribose ChEBI	-	builds acid from
[Ref.: #43151]	D-sorbitol ChEBI	-	builds acid from
[Ref.: #43151]	D-sorbitol ChEBI	-	carbon source
[Ref.: #43151]	D-tagatose ChEBI	-	builds acid from
[Ref.: #43151]	D-trehalose ChEBI	-	builds acid from
[Ref.: #43151]	D-xylose ChEBI	-	builds acid from
[Ref.: #43151]	erythritol ChEBI	-	builds acid from
[Ref.: #43151]	esculin ChEBI	-	hydrolysis
[Ref.: #43151]	esculin ferric citrate	+	builds acid from
[Ref.: #43151]	formate ChEBI	-	carbon source
[Ref.: #43151]	galactitol ChEBI	-	builds acid from
[Ref.: #43151]	gentiobiose ChEBI	-	builds acid from
[Ref.: #43151]	gluconate ChEBI	-	builds acid from
[Ref.: #43151]	glucose ChEBI	+/-	fermentation
[Ref.: #43151]	glycerol ChEBI	-	builds acid from
[Ref.: #43151]	glycerol ChEBI	-	carbon source
[Ref.: #43151]	glycogen ChEBI	+	builds acid from
[Ref.: #43151]	inulin ChEBI	-	builds acid from
[Ref.: #43151]	L-arabinose ChEBI	-	builds acid from
[Ref.: #43151]	L-arabinose ChEBI	-	carbon source
[Ref.: #43151]	L-arabitol ChEBI	+	builds acid from
[Ref.: #43151]	L-fucose ChEBI	-	builds acid from
[Ref.: #43151]	L-proline ChEBI	+	carbon source
[Ref.: #43151]	L-rhamnose ChEBI	-	builds acid from
[Ref.: #43151]	L-rhamnose ChEBI	-	carbon source
[Ref.: #43151]	L-sorbose ChEBI	-	builds acid from
[Ref.: #43151]	L-threonine ChEBI	-	carbon source
[Ref.: #43151]	L-xylose ChEBI	-	builds acid from
[Ref.: #43151]	lactose ChEBI	-	builds acid from
[Ref.: #43151]	lactose ChEBI	-	carbon source
[Ref.: #43151]	maltose ChEBI	+	builds acid from
[Ref.: #43151]	maltose ChEBI	-	carbon source
[Ref.: #43151]	mannitol ChEBI	-	carbon source
[Ref.: #43151]	melezitose ChEBI	-	builds acid from
[Ref.: #43151]	melibiose ChEBI	-	builds acid from
[Ref.: #43151]	melibiose ChEBI	-	carbon source
[Ref.: #43151]	methyl alpha-D-glucopyranoside ChEBI	-	builds acid from
[Ref.: #43151]	methyl alpha-D-mannoside ChEBI	-	builds acid from
[Ref.: #43151]	methyl beta-D-xylopyranoside ChEBI	-	builds acid from
[Ref.: #43151]	myo-inositol ChEBI	-	builds acid from
[Ref.: #43151]	myo-inositol ChEBI	-	carbon source
[Ref.: #43151]	N-acetylgalactosamine ChEBI	+	carbon source
[Ref.: #43151]	N-acetylglucosamine ChEBI	+	builds acid from
[Ref.: #43151]	nitrate ChEBI	-	reduction
[Ref.: #43151]	propionate ChEBI	+	carbon source
[Ref.: #43151]	raffinose ChEBI	-	builds acid from
[Ref.: #43151]	ribitol ChEBI	-	builds acid from
[Ref.: #43151]	salicin ChEBI	-	builds acid from
[Ref.: #43151]	starch ChEBI	+	hydrolysis
[Ref.: #43151]	starch ChEBI	+	builds acid from
[Ref.: #43151]	sucrose ChEBI	+	builds acid from
[Ref.: #43151]	sucrose ChEBI	-	carbon source
[Ref.: #43151]	trehalose ChEBI	-	carbon source
[Ref.: #43151]	turanose ChEBI	-	builds acid from
[Ref.: #43151]	tween 20 ChEBI	+	hydrolysis
[Ref.: #43151]	tween 40 ChEBI	+	hydrolysis
[Ref.: #43151]	tween 60 ChEBI	+	hydrolysis
[Ref.: #43151]	tween 80 ChEBI	+	hydrolysis
[Ref.: #43151]	xanthine ChEBI	-	hydrolysis
[Ref.: #43151]	xylitol ChEBI	-	builds acid from
	Only first 10 entries are displayed. Click here to see all.

	Metabolite production	Metabolite	Production
[Ref.: #43151]		indole ChEBI	no

	Enzyme	Enzyme activity	EC number
[Ref.: #43151]	acid phosphatase	+	3.1.3.2
[Ref.: #43151]	alkaline phosphatase	+	3.1.3.1
[Ref.: #43151]	alpha-chymotrypsin	-	3.4.21.1
[Ref.: #43151]	alpha-fucosidase	-	3.2.1.51
[Ref.: #43151]	alpha-galactosidase	-	3.2.1.22
[Ref.: #43151]	alpha-glucosidase	-	3.2.1.20
[Ref.: #43151]	alpha-mannosidase	-	3.2.1.24
[Ref.: #43151]	arginine dihydrolase	-	3.5.3.6
[Ref.: #43151]	beta-galactosidase	-	3.2.1.23
[Ref.: #43151]	beta-glucosidase	-	3.2.1.21
[Ref.: #43151]	beta-glucuronidase	-	3.2.1.31
[Ref.: #43151]	catalase	+	1.11.1.6
[Ref.: #43151]	cystine arylamidase	-	3.4.11.3
[Ref.: #43151]	cytochrome oxidase	+	1.9.3.1
[Ref.: #43151]	esterase (C 4)	-
[Ref.: #43151]	esterase Lipase (C 8)	-
[Ref.: #43151]	gelatinase	+
[Ref.: #43151]	leucine arylamidase	+	3.4.11.1
[Ref.: #43151]	lipase (C 14)	-
[Ref.: #43151]	N-acetyl-beta-glucosaminidase	+	3.2.1.52
[Ref.: #43151]	naphthol-AS-BI-phosphohydrolase	+
[Ref.: #43151]	trypsin	-	3.4.21.4
[Ref.: #43151]	urease	-	3.5.1.5
[Ref.: #43151]	valine arylamidase	-
	Only first 10 entries are displayed. Click here to see all.

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #43151]	Sample type/isolated from	Antarctic sea surface microlayer
[Ref.: #43151]	Sampling date	2014-12
[Ref.: #43151]	Geographic location (country and/or sea, region)	Terra Nova Bay in the Ross Sea
[Ref.: #43151]	Country	Antarctica
[Ref.: #43151]	Country ISO 3 Code	ATA
[Ref.: #43151]	Continent	Australia and Oceania
[Ref.: #43151]	Geographic location	-75.0000°/164.0000°

[Ref.: #67770]	Sample type/isolated from	Sea surface microlayer from the Ross Sea
[Ref.: #67770]	Country	Antarctica
[Ref.: #67770]	Country ISO 3 Code	ATA
[Ref.: #67770]	Continent	Antarctica
* marker position based on {}

Isolation sources categories

#Environmental

#Aquatic

#Marine

What are isolation sources categories?

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #43151]	16S rRNA gene sequences	KU716039	1418	ENA	1840331 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Pseudoalteromonas neustonica PAMC 28425	GCA_001653135	contig	GenBank	1840331 tax ID

[Ref.: #43151]

GC-content

39.7 mol%

genome sequence analysis

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Pseudoalteromonas neustonica PAMC 28425 NCBI: GCA_001653135.1
[Ref.: #69480]	flagellated	yes	92.387	no
[Ref.: #69480]	gram-positive	no	99.098	yes
[Ref.: #69480]	anaerobic	no	96.503	no
[Ref.: #69480]	halophile	no	57.201	no
[Ref.: #69480]	spore-forming	no	94.225	no
[Ref.: #69480]	glucose-util	yes	87.612	yes
[Ref.: #69480]	motile	yes	92.672	no
[Ref.: #69480]	aerobic	yes	86.86	no
[Ref.: #69480]	thermophile	no	99.66	yes
[Ref.: #69480]	glucose-ferment	no	80.19	no

Availability in culture collections External links

[Ref.: #43151]

Culture collection no.

KCCM 43187, JCM 31286, PAMC 28425

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Pseudoalteromonas neustonica sp. nov., isolated from the sea surface microlayer of the Ross Sea (Antarctica), and emended description of the genus Pseudoalteromonas.	Hwang CY, Lee I, Hwang YJ, Yoon SJ, Lee WS, Cho BC	Int J Syst Evol Microbiol	10.1099/ijsem.0.001202	2016	*
Phylogeny	Pseudoalteromonas ostreae sp. nov., a new bacterial species harboured by the flat oyster Ostrea edulis.	Cuny H, Offret C, Boukerb AM, Parizadeh L, Lesouhaitier O, Le Chevalier P, Jegou C, Bazire A, Brillet B, Fleury Y	Int J Syst Evol Microbiol	10.1099/ijsem.0.005070	2021	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#43151

Chung Yeon Hwang, Inae Lee, Yeon Ju Hwang, Soo Jung Yoon, Won Sang Lee and Byung Cheol Cho: Pseudoalteromonas neustonica sp. nov., isolated from the sea surface microlayer of the Ross Sea (Antarctica), and emended description of the genus Pseudoalteromonas. IJSEM 66: 3377 - 3382 2016 ( DOI 10.1099/ijsem.0.001202 , PubMed 27260339 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

* These data were automatically processed and therefore are not curated

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Pseudoalteromonas neustonica PAMC 28425

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