Name: Rhizorhabdus dicambivorans Ndbn-20
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 140624

Type strain:

Species: Rhizorhabdus dicambivorans

Strain Designation: Ndbn-20

Culture col. no.: KACC 18661, CCTCC AB 2016143, DSM 107650

Strain history: <- CCTCC <- L. Yao and D.-R. Ding, Key Laboratory of Agricultural Environmental Microbiology,Nanjing Agricultural University, Nanjing, PR China

NCBI tax ID(s): 1850238 (species)

SI-ID 402225

DSM 107650

Section

Rhizorhabdus dicambivorans Ndbn-20 is an obligate aerobe, mesophilic, Gram-negative bacterium that forms circular colonies and was isolated from compost.

colony-forming
Gram-negative
rod-shaped
mesophilic
obligate aerobe
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Alphaproteobacteria*
	Order	*Sphingomonadales*
	Family	*Sphingomonadaceae*
	Genus	*Rhizorhabdus*
	Species	**Rhizorhabdus dicambivorans**
	Full Scientific Name (LPSN)	Rhizorhabdus dicambivorans Yao et al. 2016

Information on morphological and physiological properties Morphology

[Ref.: #43148]	Gram stain	negative
[Ref.: #69480]	Gram stain	negative Confidence in %99.997

[Ref.: #43148]	Cell length	0.8-1.2 µm

[Ref.: #43148]	Cell width	0.4-0.6 µm

[Ref.: #43148]	Cell shape	rod-shaped

[Ref.: #43148]	Motility	no

[Ref.: #43148]	Colony color	pale yellow
[Ref.: #43148]	Colony shape	circular
[Ref.: #43148]	Incubation period	7 days
[Ref.: #43148]	Cultivation medium used	R2A

Information on culture and growth conditions Culture and growth conditions

[Ref.: #43148]

Culture medium

Reasoner's 2A agar (R2A)

[Ref.: #43148]

Culture medium growth

[Ref.: #64826]

Culture medium

R2A MEDIUM (DSMZ Medium 830)

[Ref.: #64826]

Culture medium growth

[Ref.: #64826]

Culture medium link

Medium recipe at MediaDive

[Ref.: #64826]

Culture medium composition

expand / minimize

		Temperature
[Ref.: #43148]	optimum	30 °C
[Ref.: #43148]	growth	15-40 °C
[Ref.: #64826]	growth	28 °C

[Ref.: #43148]	Temperature range	mesophilic
[Ref.: #64826]	Temperature range	mesophilic

	pH	Kind of pH		pH
[Ref.: #43148]			optimum	7
[Ref.: #43148]			growth	5.0-9.0

Information on physiology and metabolism Physiology and metabolism

[Ref.: #43148]

Oxygen tolerance

obligate aerobe

[Ref.: #43148]	Type of spore	spore
[Ref.: #43148]	Ability of spore formation	no
[Ref.: #69481]	Ability of spore formation	no Confidence in %96
[Ref.: #69480]	Ability of spore formation	no Confidence in %99.996

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #43148]		NaCl		growth	0-2.0	%(w/v)
[Ref.: #43148]		NaCl		optimum	0.5	%

[Ref.: #43148]

Observation

degradation of dicamba

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #43148]	adipate ChEBI	-	assimilation
[Ref.: #43148]	arabinose ChEBI	-	assimilation
[Ref.: #43148]	D-xylose ChEBI	+	builds acid from
[Ref.: #43148]	decanoate ChEBI	-	assimilation
[Ref.: #43148]	esculin ChEBI	+	hydrolysis
[Ref.: #43148]	fructose ChEBI	+	builds acid from
[Ref.: #43148]	galactose ChEBI	-	builds acid from
[Ref.: #43148]	gelatin ChEBI	-	hydrolysis
[Ref.: #43148]	glucose ChEBI	-	fermentation
[Ref.: #43148]	malate ChEBI	-	assimilation
[Ref.: #43148]	maltose ChEBI	-	assimilation
[Ref.: #43148]	mannitol ChEBI	-	assimilation
[Ref.: #43148]	mannose ChEBI	-	assimilation
[Ref.: #43148]	melibiose ChEBI	-	builds acid from
[Ref.: #43148]	N-acetylglucosamine ChEBI	-	assimilation
[Ref.: #43148]	nitrate ChEBI	+	reduction
[Ref.: #43148]	potassium gluconate ChEBI	-	assimilation
[Ref.: #43148]	ribose ChEBI	+	builds acid from
[Ref.: #43148]	sodium citrate ChEBI	-	assimilation
[Ref.: #43148]	starch ChEBI	+	builds acid from
[Ref.: #43148]	sucrose ChEBI	-	builds acid from
[Ref.: #43148]	urea ChEBI	+	hydrolysis
	Only first 10 entries are displayed. Click here to see all.

	Metabolite	Antibiotic sensitivity	Concentration		Antibiotic resistance	Concentration
[Ref.: #43148]	ampicillin ChEBI	yes	10	µg (disc)
[Ref.: #43148]	carbenicillin ChEBI	yes	100	µg (disc)
[Ref.: #43148]	chloramphenicol ChEBI	yes	30	µg (disc)
[Ref.: #43148]	clindamycin ChEBI				yes	30	µg (disc)
[Ref.: #43148]	gentamicin ChEBI	yes	10	µg (disc)
[Ref.: #43148]	kanamycin ChEBI	yes	30	µg (disc)
[Ref.: #43148]	roxithromycin ChEBI	yes	15	µg (disc)
[Ref.: #43148]	streptomycin ChEBI				yes	10	µg (disc)
[Ref.: #43148]	tetracycline ChEBI	yes	30	µg (disc)

	Metabolite production	Metabolite	Production
[Ref.: #43148]		indole ChEBI	no

	Enzyme	Enzyme activity	EC number
[Ref.: #43148]	acid phosphatase	-	3.1.3.2
[Ref.: #43148]	alkaline phosphatase	-	3.1.3.1
[Ref.: #43148]	alpha-galactosidase	+	3.2.1.22
[Ref.: #43148]	alpha-glucosidase	+	3.2.1.20
[Ref.: #43148]	alpha-mannosidase	+	3.2.1.24
[Ref.: #43148]	beta-D-fucosidase	+	3.2.1.38
[Ref.: #43148]	beta-galactosidase	+	3.2.1.23
[Ref.: #43148]	beta-glucosidase	+	3.2.1.21
[Ref.: #43148]	beta-glucuronidase	+	3.2.1.31
[Ref.: #43148]	catalase	-	1.11.1.6
[Ref.: #43148]	chymotrypsin	+	3.4.4.5
[Ref.: #43148]	cystine arylamidase	+	3.4.11.3
[Ref.: #43148]	cytochrome oxidase	-	1.9.3.1
[Ref.: #43148]	esterase (C 4)	-
[Ref.: #43148]	esterase Lipase (C 8)	-
[Ref.: #43148]	leucine arylamidase	-	3.4.11.1
[Ref.: #43148]	lipase (C 14)	+
[Ref.: #43148]	N-acetyl-glucosidase	+
[Ref.: #43148]	naphthol-AS-BI-phosphohydrolase	-
[Ref.: #43148]	trypsin	-	3.4.21.4
[Ref.: #43148]	valine arylamidase	-
	Only first 10 entries are displayed. Click here to see all.

Fatty acid profile

Metadata FA analysis

Reference

[Ref.: #43148]

Fatty acid	Percentage
C18:1ω7c / C18:1ω6c	46.17
C16:1ω7c / C16:1ω6c	11.68
C17:1ω6c	10.96
C16:0	10.36
C14:0 2OH	7.56
11-methyl C18:1ω7c	2.61
C16:1ω5c	2.35
C17:1ω8c	1.67
cyclo-C19:0ω8c	1.41
C15:0 2OH	1.34
C17:0	1.18
C14:0	0.75
C18:1ω5c	0.66
C18:0	0.42
C18:1ω9c	0.19
C12:0	0.18
C13:0 2OH	0.15

	Pathway	Enzyme coverage	Annotated reactions
	Pathway annotation	Computationally determined by
[Ref.: #66794]	valine metabolism	100	9 of 9
[Ref.: #66794]	gluconeogenesis	100	8 of 8
[Ref.: #66794]	C4 and CAM-carbon fixation	100	8 of 8
[Ref.: #66794]	cis-vaccenate biosynthesis	100	2 of 2
[Ref.: #66794]	coenzyme A metabolism	100	4 of 4
[Ref.: #66794]	formaldehyde oxidation	100	3 of 3
[Ref.: #66794]	biotin biosynthesis	100	4 of 4
[Ref.: #66794]	L-lactaldehyde degradation	100	3 of 3
[Ref.: #66794]	Entner Doudoroff pathway	100	10 of 10
[Ref.: #66794]	glycogen metabolism	100	5 of 5
[Ref.: #66794]	threonine metabolism	100	10 of 10
[Ref.: #66794]	adipate degradation	100	2 of 2
[Ref.: #66794]	palmitate biosynthesis	100	22 of 22
[Ref.: #66794]	denitrification	100	2 of 2
[Ref.: #66794]	gallate degradation	100	5 of 5
[Ref.: #66794]	anapleurotic synthesis of oxalacetate	100	1 of 1
[Ref.: #66794]	butanoate fermentation	100	4 of 4
[Ref.: #66794]	folate polyglutamylation	100	1 of 1
[Ref.: #66794]	taurine degradation	100	1 of 1
[Ref.: #66794]	ceramide biosynthesis	100	1 of 1
[Ref.: #66794]	suberin monomers biosynthesis	100	2 of 2
[Ref.: #66794]	quinate degradation	100	2 of 2
[Ref.: #66794]	ppGpp biosynthesis	100	4 of 4
[Ref.: #66794]	CDP-diacylglycerol biosynthesis	100	2 of 2
[Ref.: #66794]	methylglyoxal degradation	100	5 of 5
[Ref.: #66794]	UDP-GlcNAc biosynthesis	100	3 of 3
[Ref.: #66794]	molybdenum cofactor biosynthesis	88.89	8 of 9
[Ref.: #66794]	serine metabolism	88.89	8 of 9
[Ref.: #66794]	chorismate metabolism	88.89	8 of 9
[Ref.: #66794]	aspartate and asparagine metabolism	88.89	8 of 9
[Ref.: #66794]	CO2 fixation in Crenarchaeota	88.89	8 of 9
[Ref.: #66794]	3-phenylpropionate degradation	86.67	13 of 15
[Ref.: #66794]	photosynthesis	85.71	12 of 14
[Ref.: #66794]	reductive acetyl coenzyme A pathway	85.71	6 of 7
[Ref.: #66794]	glutamate and glutamine metabolism	85.71	24 of 28
[Ref.: #66794]	tetrahydrofolate metabolism	85.71	12 of 14
[Ref.: #66794]	phenylalanine metabolism	84.62	11 of 13
[Ref.: #66794]	leucine metabolism	84.62	11 of 13
[Ref.: #66794]	NAD metabolism	83.33	15 of 18
[Ref.: #66794]	propionate fermentation	80	8 of 10
[Ref.: #66794]	3-chlorocatechol degradation	80	4 of 5
[Ref.: #66794]	factor 420 biosynthesis	80	4 of 5
[Ref.: #66794]	phenylacetate degradation (aerobic)	80	4 of 5
[Ref.: #66794]	4-hydroxyphenylacetate degradation	80	8 of 10
[Ref.: #66794]	ethylmalonyl-CoA pathway	80	4 of 5
[Ref.: #66794]	peptidoglycan biosynthesis	80	12 of 15
[Ref.: #66794]	alanine metabolism	79.31	23 of 29
[Ref.: #66794]	heme metabolism	78.57	11 of 14
[Ref.: #66794]	citric acid cycle	78.57	11 of 14
[Ref.: #66794]	methionine metabolism	76.92	20 of 26
[Ref.: #66794]	vitamin B1 metabolism	76.92	10 of 13
[Ref.: #66794]	purine metabolism	76.6	72 of 94
[Ref.: #66794]	CMP-KDO biosynthesis	75	3 of 4
[Ref.: #66794]	isoleucine metabolism	75	6 of 8
[Ref.: #66794]	toluene degradation	75	3 of 4
[Ref.: #66794]	lactate fermentation	75	3 of 4
[Ref.: #66794]	glycogen biosynthesis	75	3 of 4
[Ref.: #66794]	sulfopterin metabolism	75	3 of 4
[Ref.: #66794]	acetate fermentation	75	3 of 4
[Ref.: #66794]	tryptophan metabolism	73.68	28 of 38
[Ref.: #66794]	flavin biosynthesis	73.33	11 of 15
[Ref.: #66794]	pentose phosphate pathway	72.73	8 of 11
[Ref.: #66794]	proline metabolism	72.73	8 of 11
[Ref.: #66794]	histidine metabolism	72.41	21 of 29
[Ref.: #66794]	tyrosine metabolism	71.43	10 of 14
[Ref.: #66794]	ubiquinone biosynthesis	71.43	5 of 7
[Ref.: #66794]	cardiolipin biosynthesis	71.43	5 of 7
[Ref.: #66794]	pyrimidine metabolism	71.11	32 of 45
[Ref.: #66794]	phenol degradation	70	14 of 20
[Ref.: #66794]	androgen and estrogen metabolism	68.75	11 of 16
[Ref.: #66794]	lipid metabolism	67.74	21 of 31
[Ref.: #66794]	octane oxidation	66.67	2 of 3
[Ref.: #66794]	cyanate degradation	66.67	2 of 3
[Ref.: #66794]	acetyl CoA biosynthesis	66.67	2 of 3
[Ref.: #66794]	IAA biosynthesis	66.67	2 of 3
[Ref.: #66794]	acetoin degradation	66.67	2 of 3
[Ref.: #66794]	non-pathway related	65.79	25 of 38
[Ref.: #66794]	glycolysis	64.71	11 of 17
[Ref.: #66794]	glutathione metabolism	64.29	9 of 14
[Ref.: #66794]	vitamin B6 metabolism	63.64	7 of 11
[Ref.: #66794]	dTDPLrhamnose biosynthesis	62.5	5 of 8
[Ref.: #66794]	6-hydroxymethyl-dihydropterin diphosphate biosynthesis	62.5	5 of 8
[Ref.: #66794]	arginine metabolism	62.5	15 of 24
[Ref.: #66794]	phosphatidylethanolamine bioynthesis	61.54	8 of 13
[Ref.: #66794]	isoprenoid biosynthesis	61.54	16 of 26
[Ref.: #66794]	cysteine metabolism	61.11	11 of 18
[Ref.: #66794]	myo-inositol biosynthesis	60	6 of 10
[Ref.: #66794]	bile acid biosynthesis, neutral pathway	58.82	10 of 17
[Ref.: #66794]	oxidative phosphorylation	57.14	52 of 91
[Ref.: #66794]	propanol degradation	57.14	4 of 7
[Ref.: #66794]	lysine metabolism	57.14	24 of 42
[Ref.: #66794]	degradation of sugar alcohols	56.25	9 of 16
[Ref.: #66794]	d-mannose degradation	55.56	5 of 9
[Ref.: #66794]	lipid A biosynthesis	55.56	5 of 9
[Ref.: #66794]	nitrate assimilation	55.56	5 of 9
[Ref.: #66794]	alginate biosynthesis	50	2 of 4
[Ref.: #66794]	pantothenate biosynthesis	50	3 of 6
[Ref.: #66794]	glycolate and glyoxylate degradation	50	3 of 6
[Ref.: #66794]	ribulose monophosphate pathway	50	1 of 2
[Ref.: #66794]	phenylmercury acetate degradation	50	1 of 2
[Ref.: #66794]	aminopropanol phosphate biosynthesis	50	1 of 2
[Ref.: #66794]	degradation of aromatic, nitrogen containing compounds	50	6 of 12
[Ref.: #66794]	ketogluconate metabolism	50	4 of 8
[Ref.: #66794]	ethanol fermentation	50	1 of 2
[Ref.: #66794]	carnitine metabolism	50	4 of 8
[Ref.: #66794]	resorcinol degradation	50	1 of 2
[Ref.: #66794]	sulfate reduction	46.15	6 of 13
[Ref.: #66794]	urea cycle	46.15	6 of 13
[Ref.: #66794]	metabolism of disaccharids	45.45	5 of 11
[Ref.: #66794]	degradation of hexoses	44.44	8 of 18
[Ref.: #66794]	degradation of sugar acids	44	11 of 25
[Ref.: #66794]	polyamine pathway	43.48	10 of 23
[Ref.: #66794]	benzoyl-CoA degradation	42.86	3 of 7
[Ref.: #66794]	arachidonate biosynthesis	40	2 of 5
[Ref.: #66794]	glycine betaine biosynthesis	40	2 of 5
[Ref.: #66794]	vitamin K metabolism	40	2 of 5
[Ref.: #66794]	glycine metabolism	40	4 of 10
[Ref.: #66794]	elloramycin biosynthesis	40	2 of 5
[Ref.: #66794]	lipoate biosynthesis	40	2 of 5
[Ref.: #66794]	O-antigen biosynthesis	40	2 of 5
[Ref.: #66794]	hydrogen production	40	2 of 5
[Ref.: #66794]	degradation of pentoses	39.29	11 of 28
[Ref.: #66794]	arachidonic acid metabolism	38.89	7 of 18
[Ref.: #66794]	chlorophyll metabolism	33.33	6 of 18
[Ref.: #66794]	sphingosine metabolism	33.33	2 of 6
[Ref.: #66794]	allantoin degradation	33.33	3 of 9
[Ref.: #66794]	(5R)-carbapenem carboxylate biosynthesis	33.33	1 of 3
[Ref.: #66794]	selenocysteine biosynthesis	33.33	2 of 6
[Ref.: #66794]	enterobactin biosynthesis	33.33	1 of 3
[Ref.: #66794]	4-hydroxymandelate degradation	33.33	3 of 9
[Ref.: #66794]	sulfoquinovose degradation	33.33	1 of 3
[Ref.: #66794]	carotenoid biosynthesis	31.82	7 of 22
[Ref.: #66794]	ascorbate metabolism	31.82	7 of 22
[Ref.: #66794]	phenylpropanoid biosynthesis	30.77	4 of 13
[Ref.: #66794]	coenzyme M biosynthesis	30	3 of 10
[Ref.: #66794]	starch degradation	30	3 of 10
[Ref.: #66794]	d-xylose degradation	27.27	3 of 11
[Ref.: #66794]	vitamin B12 metabolism	26.47	9 of 34
[Ref.: #66794]	catecholamine biosynthesis	25	1 of 4
[Ref.: #66794]	vitamin E metabolism	25	1 of 4
[Ref.: #66794]	cyclohexanol degradation	25	1 of 4
[Ref.: #66794]	daunorubicin biosynthesis	22.22	2 of 9
		Only first 10 entries are displayed. Click here to see all.

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #43148]	Sample type/isolated from	compost
[Ref.: #43148]	Geographic location (country and/or sea, region)	Mount Zijin, Nanjing, Jiangsu Province, PR China
[Ref.: #43148]	Country	China
[Ref.: #43148]	Country ISO 3 Code	CHN
[Ref.: #43148]	Continent	Asia
[Ref.: #43148]	Geographic location	32.0000°/118.0000°

[Ref.: #64826]	Sample type/isolated from	compost of plant litter
[Ref.: #64826]	Country	China
[Ref.: #64826]	Country ISO 3 Code	CHN
[Ref.: #64826]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Engineered

#Biodegradation

#Composting

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence KP064570 (>99% sequence identity) for Rhizorhabdus dicambivorans from Microbeatlas

Aquatic Samples	157
Soil Samples	176
Animal Samples	48
Plant Samples	9
Total Samples	390

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #64826]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #64826]	Rhizorhabdus dicambivorans strain Ndbn-20 16S ribosomal RNA gene, partial sequence	KP064570	1447	ENA	1850238 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Rhizorhabdus dicambivorans Ndbn-20	GCA_002355275	complete	GenBank	1850238 tax ID	*
[Ref.: #66792]	Rhizorhabdus dicambivorans Ndbn-20	2775506841	complete	JGI IMG/M	1850238 tax ID	*

[Ref.: #43148]

GC-content

65.4 mol%

high performance liquid chromatography (HPLC)

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Rhizorhabdus dicambivorans Ndbn-20 NCBI: GCA_002355275.1
[Ref.: #69481]	spore-forming	no	96	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Rhizorhabdus dicambivorans Ndbn-20 NCBI: GCA_002355275.1
[Ref.: #69480]	flagellated	no	88.248	yes
[Ref.: #69480]	gram-positive	no	96.169	no
[Ref.: #69480]	anaerobic	no	98.551	yes
[Ref.: #69480]	aerobic	yes	92.387	no
[Ref.: #69480]	halophile	no	96.113	yes
[Ref.: #69480]	spore-forming	no	95.603	yes
[Ref.: #69480]	glucose-util	yes	78.949	no
[Ref.: #69480]	thermophile	no	96.291	yes
[Ref.: #69480]	motile	yes	75.665	no
[Ref.: #69480]	glucose-ferment	no	93.628	yes

Availability in culture collections External links

[Ref.: #64826]

Culture collection no.

KACC 18661, CCTCC AB 2016143, DSM 107650

[Ref.: #96758]

SI-ID 402225

Literature:

Only first 10 entries are displayed. Click here to see all.

Topic	Title	Authors	Journal	DOI	Year
Metabolism	Roles of Two Glutathione-Dependent 3,6-Dichlorogentisate Dehalogenases in Rhizorhabdus dicambivorans Ndbn-20 in the Catabolism of the Herbicide Dicamba.	Li N, Tong RL, Yao L, Chen Q, Yan X, Ding DR, Qiu JG, He J, Jiang JD	Appl Environ Microbiol	10.1128/AEM.00623-18	2018	*
Metabolism	3,6-Dichlorosalicylate Catabolism Is Initiated by the DsmABC Cytochrome P450 Monooxygenase System in Rhizorhabdus dicambivorans Ndbn-20.	Li N, Yao L, He Q, Qiu J, Cheng D, Ding D, Tao Q, He J, Jiang J	Appl Environ Microbiol	10.1128/AEM.02133-17	2018	*
Metabolism	Roles of the Gentisate 1,2-Dioxygenases DsmD and GtdA in the Catabolism of the Herbicide Dicamba in Rhizorhabdus dicambivorans Ndbn-20.	Li N, Peng Q, Yao L, He Q, Qiu J, Cao H, He J, Niu Q, Lu Y, Hui F	J Agric Food Chem	10.1021/acs.jafc.0c01523	2020	*
Metabolism	The Properties of 5-Methyltetrahydrofolate Dehydrogenase (MetF1) and Its Role in the Tetrahydrofolate-Dependent Dicamba Demethylation System in Rhizorhabdus dicambivorans Ndbn-20.	Yao S, Chen L, Yang Z, Yao L, Zhu J, Qiu J, Wang G, He J	J Bacteriol	10.1128/JB.00096-19	2019	*
Metabolism	Coexpression of Methyltransferase Gene dmt50 and Methylene Tetrahydrofolate Reductase Gene Increases Arabidopsis thaliana Dicamba Resistance.	Chen L, Yao S, Chen T, Tao Q, Xie X, Xiao X, Ding D, He Q, He J	J Agric Food Chem	10.1021/acs.jafc.8b04944	2019	*
Phylogeny	Rhizorhabdus dicambivorans sp. nov., a dicamba-degrading bacterium isolated from compost.	Yao L, Zhang JJ, Yu LL, Chen Q, Zhu JC, He J, Ding DR	Int J Syst Evol Microbiol	10.1099/ijsem.0.001194	2016	*
Enzymology	Cloning of a novel tetrahydrofolate-dependent dicamba demethylase gene from dicamba-degrading consortium and characterization of the gene product.	Li N, Chen L, Chen E, Yuan C, Zhang H, He J	Front Microbiol	10.3389/fmicb.2022.978577	2022	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#43148

Li Yao, Jun-Jie Zhang, Lin-Lu Yu, Qin Chen, Jian-Chun Zhu, Jian He and De-Rong Ding: Rhizorhabdus dicambivorans sp. nov., a dicamba-degrading bacterium isolated from compost. IJSEM 66: 3317 - 3323 2016 ( DOI 10.1099/ijsem.0.001194 , PubMed 27255344 )

#64826

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 107650

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#66794

Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 )

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#96758

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID402225.1 )

* These data were automatically processed and therefore are not curated

Change proposal

You found an error in BacDive? Please tell us about it!

Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.

Search for species Rhizorhabdus dicambivorans in external resources:
SILVA
BRENDA
PANGAEA
StrainInfo
GBIF