Name: Nesterenkonia cremea 10C
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 140586

Type strain:

Species: Nesterenkonia cremea

Strain Designation: 10C

Culture col. no.: LMG 29100, KCTC 39636, CGMCC 1.15388

Strain history: <- SVV Reddy

NCBI tax ID(s): 1882340 (species)

Section

Nesterenkonia cremea 10C is an aerobe, mesophilic, Gram-positive bacterium that forms circular colonies and was isolated from sediment sample.

colony-forming
Gram-positive
rod-shaped
aerobe
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Micrococcales*
	Family	*Micrococcaceae*
	Genus	*Nesterenkonia*
	Species	**Nesterenkonia cremea**
	Full Scientific Name (LPSN)	Nesterenkonia cremea Sultanpuram et al. 2017

Information on morphological and physiological properties Morphology

[Ref.: #43224]	Gram stain	positive
[Ref.: #69480]	Gram stain	positive Confidence in %100

[Ref.: #43224]	Cell length	2.1-3.6 µm

[Ref.: #43224]	Cell width	0.5-0.6 µm

[Ref.: #43224]	Cell shape	rod-shaped

[Ref.: #43224]	Motility	no

[Ref.: #43224]	Colony size	0.5-1.0 mm
[Ref.: #43224]	Colony color	cream
[Ref.: #43224]	Colony shape	circular
[Ref.: #43224]	Incubation period	3 days
[Ref.: #43224]	Cultivation medium used	Marine agar

Information on culture and growth conditions Culture and growth conditions

		Temperature
[Ref.: #43224]	optimum	37 °C
[Ref.: #43224]	growth	10-55 °C
[Ref.: #67771]	growth	37 °C

[Ref.: #43224]	Temperature range	mesophilic
[Ref.: #67771]	Temperature range	mesophilic

	pH	Kind of pH		pH
[Ref.: #43224]			optimum	7.5-8.0
[Ref.: #43224]			growth	7.0-9.0

Information on physiology and metabolism Physiology and metabolism

[Ref.: #43224]	Oxygen tolerance	aerobe
[Ref.: #67771]	Oxygen tolerance	aerobe

[Ref.: #43224]	Type of spore	endospore
[Ref.: #43224]	Ability of spore formation	no
[Ref.: #69481]	Ability of spore formation	no Confidence in %100
[Ref.: #69480]	Ability of spore formation	no Confidence in %99.994

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #43224]		NaCl		optimum	5-6	%
[Ref.: #43224]		NaCl		growth	2-11	%

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #43224]	ammonium chloride ChEBI	+	nitrogen source
[Ref.: #43224]	arabinose ChEBI	+	carbon source
[Ref.: #43224]	arabinose ChEBI	-	builds acid from
[Ref.: #43224]	arabinose ChEBI	-	builds gas from
[Ref.: #43224]	aspartate ChEBI	-	nitrogen source
[Ref.: #43224]	cellobiose ChEBI	+	builds acid from
[Ref.: #43224]	cellobiose ChEBI	+	builds gas from
[Ref.: #43224]	D-mannose ChEBI	+	carbon source
[Ref.: #43224]	fructose ChEBI	+	builds acid from
[Ref.: #43224]	fructose ChEBI	+	builds gas from
[Ref.: #43224]	galactose ChEBI	-	carbon source
[Ref.: #43224]	gelatin ChEBI	+	hydrolysis
[Ref.: #43224]	glucose ChEBI	+	builds acid from
[Ref.: #43224]	glucose ChEBI	+	builds gas from
[Ref.: #43224]	glutamate ChEBI	+	nitrogen source
[Ref.: #43224]	glycine ChEBI	+	nitrogen source
[Ref.: #43224]	inulin ChEBI	+	builds acid from
[Ref.: #43224]	inulin ChEBI	+	builds gas from
[Ref.: #43224]	lactose ChEBI	+	carbon source
[Ref.: #43224]	lactose ChEBI	-	builds acid from
[Ref.: #43224]	lactose ChEBI	-	builds gas from
[Ref.: #43224]	maltose ChEBI	+	carbon source
[Ref.: #43224]	maltose ChEBI	-	builds acid from
[Ref.: #43224]	maltose ChEBI	-	builds gas from
[Ref.: #43224]	mannitol ChEBI	+	carbon source
[Ref.: #43224]	mannitol ChEBI	-	builds acid from
[Ref.: #43224]	mannitol ChEBI	-	builds gas from
[Ref.: #43224]	mannose ChEBI	+	builds acid from
[Ref.: #43224]	mannose ChEBI	+	builds gas from
[Ref.: #43224]	melibiose ChEBI	-	carbon source
[Ref.: #43224]	myo-inositol ChEBI	+	carbon source
[Ref.: #43224]	myo-inositol ChEBI	-	builds acid from
[Ref.: #43224]	myo-inositol ChEBI	-	builds gas from
[Ref.: #43224]	nitrate ChEBI	+	nitrogen source
[Ref.: #43224]	nitrite ChEBI	-	nitrogen source
[Ref.: #43224]	raffinose ChEBI	-	carbon source
[Ref.: #43224]	rhamnose ChEBI	-	carbon source
[Ref.: #43224]	salicin ChEBI	-	carbon source
[Ref.: #43224]	sorbitol ChEBI	-	carbon source
[Ref.: #43224]	starch ChEBI	-	hydrolysis
[Ref.: #43224]	sucrose ChEBI	+	builds acid from
[Ref.: #43224]	sucrose ChEBI	+	builds gas from
[Ref.: #43224]	trehalose ChEBI	-	carbon source
[Ref.: #43224]	tyrosine ChEBI	+	nitrogen source
[Ref.: #43224]	urea ChEBI	+	nitrogen source
[Ref.: #43224]	xylose ChEBI	+	carbon source
[Ref.: #43224]	xylose ChEBI	-	builds acid from
[Ref.: #43224]	xylose ChEBI	-	builds gas from
	Only first 10 entries are displayed. Click here to see all.

	Metabolite	Antibiotic sensitivity	Concentration		Antibiotic resistance	Concentration
[Ref.: #43224]	amikacin ChEBI	yes	30	µg
[Ref.: #43224]	ampicillin ChEBI	yes	10	µg
[Ref.: #43224]	chloramphenicol ChEBI	yes	30	µg
[Ref.: #43224]	ciprofloxacin ChEBI				yes	5	µg
[Ref.: #43224]	erythromycin ChEBI	yes	15	µg
[Ref.: #43224]	gentamicin ChEBI	yes	101	µg
[Ref.: #43224]	kanamycin ChEBI				yes	30	µg
[Ref.: #43224]	nalidixic acid ChEBI				yes	30	µg
[Ref.: #43224]	penicillin ChEBI	yes	10	µg
[Ref.: #43224]	streptomycin ChEBI	yes	10	µg
[Ref.: #43224]	tetracycline ChEBI	yes	30	µg
[Ref.: #43224]	vancomycin ChEBI	yes	30	µg
	Only first 10 entries are displayed. Click here to see all.

	Enzyme	Enzyme activity	EC number
[Ref.: #43224]	catalase	+	1.11.1.6
[Ref.: #43224]	cytochrome oxidase	+	1.9.3.1
[Ref.: #43224]	gelatinase	+

Fatty acid profile

Metadata FA analysis

Reference

[Ref.: #43224]

Fatty acid	Percentage
C17:0 anteiso	23.9
C16:0 iso	12.5

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #43224]	Sample type/isolated from	sediment sample
[Ref.: #43224]	Geographic location (country and/or sea, region)	Lonar soda lake, Buldhana, Maharashtra, India
[Ref.: #43224]	Country	India
[Ref.: #43224]	Country ISO 3 Code	IND
[Ref.: #43224]	Continent	Asia
[Ref.: #43224]	Geographic location	19.0000°/76.0000°

[Ref.: #67771]	Sample type/isolated from	From Lonar soda lake in India
[Ref.: #67771]	Country	India
[Ref.: #67771]	Country ISO 3 Code	IND
[Ref.: #67771]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental	#Terrestrial	#Sediment
#Environmental	#Aquatic	#Sediment

What are isolation sources categories?

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #43224]	16S rRNA gene sequences	LT601575	1441	ENA	1882340 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Nesterenkonia cremea CGMCC 1.15388	GCA_014642675	contig	GenBank	1882340 tax ID	*
[Ref.: #66792]	Nesterenkonia cremea strain CGMCC 1.15388	1882340.4	wgs	PATRIC	1882340 tax ID	*

[Ref.: #43224]

GC-content

68.6 mol%

high performance liquid chromatography (HPLC)

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Nesterenkonia cremea strain CGMCC 1.15388 PATRIC: 1882340.4
[Ref.: #69481]	spore-forming	no	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Nesterenkonia cremea strain CGMCC 1.15388 PATRIC: 1882340.4
[Ref.: #69480]	motile	no	94.063	yes
[Ref.: #69480]	gram-positive	yes	92.85	yes
[Ref.: #69480]	anaerobic	no	99.264	no
[Ref.: #69480]	aerobic	yes	94.636	yes
[Ref.: #69480]	halophile	yes	89.106	no
[Ref.: #69480]	spore-forming	no	92.98	no
[Ref.: #69480]	glucose-util	yes	89.423	no
[Ref.: #69480]	flagellated	no	96.867	yes
[Ref.: #69480]	glucose-ferment	no	83.026	no
[Ref.: #69480]	thermophile	no	95.63	yes

Availability in culture collections External links

[Ref.: #43224]

Culture collection no.

LMG 29100, KCTC 39636, CGMCC 1.15388

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Nesterenkonia cremea sp. nov., a bacterium isolated from a soda lake.	Sultanpuram VR, Mothe T, Chintalapati S, Chintalapati VR	Int J Syst Evol Microbiol	10.1099/ijsem.0.001876	2017	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#43224

Vishnuvardhan Reddy Sultanpuram, Thirumala Mothe, Sasikala Chintalapati and Venkata Ramana Chintalapati: Nesterenkonia cremea sp. nov., a bacterium isolated from a soda lake. IJSEM 67: 1861 - 1866 2017 ( DOI 10.1099/ijsem.0.001876 , PubMed 28665262 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67771 Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

* These data were automatically processed and therefore are not curated

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Nesterenkonia cremea strain CGMCC 1.15388

Nesterenkonia cremea strain CGMCC 1.15388

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