Lysinibacillus telephonicus (MCC 3065, KACC 18714, LMG 29294)

Name: Lysinibacillus telephonicus (MCC 3065, KACC 18714, LMG 29294)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 140558

Type strain

Strain Designation S5H2222

Culture col. no. MCC 3065 KACC 18714 LMG 29294 S5H2222

NCBI tax ID(s) 1714840

Special Collections Literature strains

Lysinibacillus telephonicus S5H2222 is an aerobe, spore-forming, Gram-positive bacterium that forms circular colonies.

spore-forming Gram-positive motile rod-shaped colony-forming aerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

Culture Collection Numbers

MCC 3065 KACC 18714 LMG 29294 S5H2222

@ref 20215

Last LPSN update 2026-02-09 11:33:39

Domain Bacteria

Phylum Bacillota

Class Bacilli

Order Caryophanales

Family Caryophanaceae

Genus Lysinibacillus

Species Lysinibacillus telephonicus

Full scientific name Lysinibacillus telephonicus Rahi et al. 2017

Synonyms (1)

"Ureibacillus telephonicus"

Morphology

Cell morphology

@ref	Gram stain	Cell length	Cell shape	Motility
43308	positive	2-4 µm	rod-shaped

Colony morphology

@ref	Colony color	Colony shape	Incubation period	Medium used
43308	pale white	circular	2 days	Trypticase soy agar

Culture and growth conditions

Culture medium

@ref	Name	Growth
43308	TS broth
43308	Trypticase soy agar

Culture temp

@ref	Growth	Type	Temperature (°C)
43308	positive	growth	10-55
43308	positive	optimum	37

Culture pH

@ref	Ability	Type	PH	PH range
43308	positive	optimum	7
43308	positive	growth	5-9	alkaliphile

Physiology and metabolism

Oxygen tolerance

43308

Oxygen toleranceaerobe

Spore formation

@ref	Spore description	Type of spore	Spore formation
43308	formed a terminal spherical spore with a swollen sporangium	endospore

Halophily

@ref	Salt	Growth	Tested relation	Concentration
43308	NaCl	positive	growth	0-10 %

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
43308	16651 ChEBI	(S)-lactate	+/-	oxidation
43308		1 % sodium lactate	+	assimilation
43308	64552 ChEBI	2-hydroxybutyrate	-	oxidation
43308	30916 ChEBI	2-oxoglutarate	-	oxidation
43308	30089 ChEBI	acetate	+	assimilation
43308	13705 ChEBI	acetoacetate	+	assimilation
43308	161680 ChEBI	aztreonam	+	assimilation
43308	78697 ChEBI	D-fructose 6-phosphate	+	assimilation
43308	12936 ChEBI	D-galactose	+/-	oxidation
43308	12936 ChEBI	D-galactose	+/-	reduction
43308	18024 ChEBI	D-galacturonic acid	+	assimilation
43308	14314 ChEBI	D-glucose 6-phosphate	-	oxidation
43308	15748 ChEBI	D-glucuronate	+	assimilation
43308	15588 ChEBI	D-malate	-	oxidation
43308	32323 ChEBI	glucuronamide	+	assimilation
43308	15978 ChEBI	glycerol 3-phosphate	-	oxidation
43308	70744 ChEBI	glycine-proline	+	assimilation
43308	32735 ChEBI	guanidinium chloride	+	assimilation
43308	17596 ChEBI	inosine	+/-	oxidation
43308	16977 ChEBI	L-alanine	+	oxidation
43308	16977 ChEBI	L-alanine	+	assimilation
43308	29991 ChEBI	L-aspartate	-	oxidation
43308	17464 ChEBI	L-galactonic acid gamma-lactone	+	assimilation
43308	29985 ChEBI	L-glutamate	+	assimilation
43308	15971 ChEBI	L-histidine	+/-	oxidation
43308	15589 ChEBI	L-malate	-	oxidation
43308	62345 ChEBI	L-rhamnose	+	oxidation
43308	62345 ChEBI	L-rhamnose	+	assimilation
43308	48607 ChEBI	lithium chloride	+	assimilation
43308	51850 ChEBI	methyl pyruvate	-	oxidation
43308	100147 ChEBI	nalidixic acid	+	assimilation
43308	75248 ChEBI	potassium tellurite	+	assimilation
43308	64103 ChEBI	sodium butyrate	+	assimilation
43308	53423 ChEBI	tween 40	-	oxidation

Enzymes

@ref	Value	Activity	Ec
43308	acid phosphatase	+	3.1.3.2
43308	alkaline phosphatase	+	3.1.3.1
43308	alpha-chymotrypsin	-	3.4.21.1
43308	cytochrome oxidase	+	1.9.3.1
43308	esterase	+
43308	esterase Lipase (C 8)	+
43308	leucine arylamidase	-	3.4.11.1
43308	naphthol-AS-BI-phosphohydrolase	+

Pathway annotation

Computationally determined by

@ref	pathway	enzyme coverage	annotated reactions
66794	suberin monomers biosynthesis	100	2 of 2
66794	adipate degradation	100	2 of 2
66794	CDP-diacylglycerol biosynthesis	100	2 of 2
66794	formaldehyde oxidation	100	3 of 3
66794	methylglyoxal degradation	100	5 of 5
66794	molybdenum cofactor biosynthesis	100	9 of 9
66794	sulfopterin metabolism	100	4 of 4
66794	coenzyme A metabolism	100	4 of 4
66794	aspartate and asparagine metabolism	100	9 of 9
66794	propanol degradation	100	7 of 7
66794	vitamin K metabolism	100	5 of 5
66794	valine metabolism	100	9 of 9
66794	gluconeogenesis	100	8 of 8
66794	UDP-GlcNAc biosynthesis	100	3 of 3
66794	biotin biosynthesis	100	4 of 4
66794	anapleurotic synthesis of oxalacetate	100	1 of 1
66794	folate polyglutamylation	100	1 of 1
66794	ppGpp biosynthesis	100	4 of 4
66794	palmitate biosynthesis	95.45	21 of 22
66794	alanine metabolism	93.1	27 of 29
66794	vitamin B1 metabolism	92.31	12 of 13
66794	threonine metabolism	90	9 of 10
66794	propionate fermentation	90	9 of 10
66794	serine metabolism	88.89	8 of 9
66794	pyrimidine metabolism	88.89	40 of 45
66794	chorismate metabolism	88.89	8 of 9
66794	C4 and CAM-carbon fixation	87.5	7 of 8
66794	flavin biosynthesis	86.67	13 of 15
66794	peptidoglycan biosynthesis	86.67	13 of 15
66794	citric acid cycle	85.71	12 of 14
66794	tetrahydrofolate metabolism	85.71	12 of 14
66794	glutamate and glutamine metabolism	85.71	24 of 28
66794	heme metabolism	85.71	12 of 14
66794	phenylalanine metabolism	84.62	11 of 13
66794	leucine metabolism	84.62	11 of 13
66794	vitamin B12 metabolism	82.35	28 of 34
66794	pentose phosphate pathway	81.82	9 of 11
66794	degradation of sugar alcohols	81.25	13 of 16
66794	lipoate biosynthesis	80	4 of 5
66794	cellulose degradation	80	4 of 5
66794	3-chlorocatechol degradation	80	4 of 5
66794	Entner Doudoroff pathway	80	8 of 10
66794	metabolism of amino sugars and derivatives	80	4 of 5
66794	purine metabolism	79.79	75 of 94
66794	photosynthesis	78.57	11 of 14
66794	CO2 fixation in Crenarchaeota	77.78	7 of 9
66794	allantoin degradation	77.78	7 of 9
66794	glycolysis	76.47	13 of 17
66794	acetate fermentation	75	3 of 4
66794	ketogluconate metabolism	75	6 of 8
66794	isoleucine metabolism	75	6 of 8
66794	CMP-KDO biosynthesis	75	3 of 4
66794	proline metabolism	72.73	8 of 11
66794	vitamin B6 metabolism	72.73	8 of 11
66794	degradation of sugar acids	72	18 of 25
66794	reductive acetyl coenzyme A pathway	71.43	5 of 7
66794	cardiolipin biosynthesis	71.43	5 of 7
66794	starch degradation	70	7 of 10
66794	methionine metabolism	69.23	18 of 26
66794	octane oxidation	66.67	2 of 3
66794	L-lactaldehyde degradation	66.67	2 of 3
66794	arginine metabolism	66.67	16 of 24
66794	acetyl CoA biosynthesis	66.67	2 of 3
66794	cyanate degradation	66.67	2 of 3
66794	enterobactin biosynthesis	66.67	2 of 3
66794	NAD metabolism	66.67	12 of 18
66794	acetoin degradation	66.67	2 of 3
66794	d-mannose degradation	66.67	6 of 9
66794	non-pathway related	65.79	25 of 38
66794	tryptophan metabolism	65.79	25 of 38
66794	histidine metabolism	65.52	19 of 29
66794	lysine metabolism	64.29	27 of 42
66794	oxidative phosphorylation	62.64	57 of 91
66794	6-hydroxymethyl-dihydropterin diphosphate biosynthesis	62.5	5 of 8
66794	urea cycle	61.54	8 of 13
66794	phenylpropanoid biosynthesis	61.54	8 of 13
66794	cysteine metabolism	61.11	11 of 18
66794	degradation of pentoses	60.71	17 of 28
66794	gallate degradation	60	3 of 5
66794	phenylacetate degradation (aerobic)	60	3 of 5
66794	factor 420 biosynthesis	60	3 of 5
66794	phenol degradation	60	12 of 20
66794	lipid metabolism	58.06	18 of 31
66794	isoprenoid biosynthesis	57.69	15 of 26
66794	ubiquinone biosynthesis	57.14	4 of 7
66794	degradation of hexoses	55.56	10 of 18
66794	4-hydroxymandelate degradation	55.56	5 of 9
66794	3-phenylpropionate degradation	53.33	8 of 15
66794	sphingosine metabolism	50	3 of 6
66794	pantothenate biosynthesis	50	3 of 6
66794	aminopropanol phosphate biosynthesis	50	1 of 2
66794	dTDPLrhamnose biosynthesis	50	4 of 8
66794	glycine metabolism	50	5 of 10
66794	glycolate and glyoxylate degradation	50	3 of 6
66794	lactate fermentation	50	2 of 4
66794	glycogen biosynthesis	50	2 of 4
66794	4-hydroxyphenylacetate degradation	50	5 of 10
66794	glutathione metabolism	50	7 of 14
66794	ribulose monophosphate pathway	50	1 of 2
66794	degradation of aromatic, nitrogen containing compounds	50	6 of 12
66794	cis-vaccenate biosynthesis	50	1 of 2
66794	ethanol fermentation	50	1 of 2
66794	selenocysteine biosynthesis	50	3 of 6
66794	kanosamine biosynthesis II	50	1 of 2
66794	sulfate reduction	46.15	6 of 13
66794	androgen and estrogen metabolism	43.75	7 of 16
66794	polyamine pathway	43.48	10 of 23
66794	glycogen metabolism	40	2 of 5
66794	ethylmalonyl-CoA pathway	40	2 of 5
66794	d-xylose degradation	36.36	4 of 11
66794	tyrosine metabolism	35.71	5 of 14
66794	sulfoquinovose degradation	33.33	1 of 3
66794	IAA biosynthesis	33.33	1 of 3
66794	(5R)-carbapenem carboxylate biosynthesis	33.33	1 of 3
66794	lipid A biosynthesis	33.33	3 of 9
66794	chlorophyll metabolism	33.33	6 of 18
66794	ascorbate metabolism	31.82	7 of 22
66794	myo-inositol biosynthesis	30	3 of 10
66794	coenzyme M biosynthesis	30	3 of 10
66794	benzoyl-CoA degradation	28.57	2 of 7
66794	arachidonic acid metabolism	27.78	5 of 18
66794	cholesterol biosynthesis	27.27	3 of 11
66794	dolichyl-diphosphooligosaccharide biosynthesis	27.27	3 of 11
66794	metabolism of disaccharids	27.27	3 of 11
66794	cyclohexanol degradation	25	1 of 4
66794	toluene degradation	25	1 of 4
66794	butanoate fermentation	25	1 of 4
66794	bile acid biosynthesis, neutral pathway	23.53	4 of 17
66794	phosphatidylethanolamine bioynthesis	23.08	3 of 13
66794	carotenoid biosynthesis	22.73	5 of 22
66794	nitrate assimilation	22.22	2 of 9

Fatty acid profile

Metadata FA analysis

@ref

43308

Fatty acid	Percentage
C15:0 iso	29.8
C15:0 anteiso	16.9
C16:0 iso	16.6
C17:0 anteiso	11.3
C17:0 iso	6.3
C16:1ω7calcohol	4.8
C16:0	4.2
C14:0 iso	3.6
C16:1ω11c	3.4
C17:1 anteiso B / C17:1 iso I	0.7
C17:1 iso ω10c	0.6
C14:0	0.6
C17:0	0.3
C20:1ω7c	0.3

Isolation, sampling and environmental information

Taxonmaps

69479

Global distribution of 16S sequence KT735049 (>99% sequence identity) for Lysinibacillus telephonicus subclade from Microbeatlas

Aquatic Samples	14
Soil Samples	71
Animal Samples	42
Plant Samples	17
Total Samples	144

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	NCBI tax ID	Score
66792	ASM396614v1 assembly for Lysinibacillus telephonicus S5H2222	contig	GCA_003966145	1714840.3	1714840	29.2

16S sequences

@ref	Description	Accession	Database
43308	Lysinibacillus telephonicus strain S5H2222 16S ribosomal RNA gene, partial sequence	KT735049

GC content

@ref	GC-content (mol%)	Method
43308	39.8	thermal denaturation, midpoint method (Tm)

Genome-based predictions

Predictions

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Lysinibacillus telephonicus S5H2222
NCBI: GCA_003966145.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	65.25	yes
125438	anaerobic	anaerobicⓘ	no	95.82	no
125438	aerobic	aerobicⓘ	yes	81.89	yes
125438	spore-forming	spore-formingⓘ	yes	89.58	no
125438	thermophilic	thermophileⓘ	no	91.74	yes
125438	flagellated	motile2+ⓘ	yes	85.58	no

Literature

Topic	Title	Authors	Journal	DOI	Year
	Robust Demarcation of the Family Caryophanaceae (Planococcaceae) and Its Different Genera Including Three Novel Genera Based on Phylogenomics and Highly Specific Molecular Signatures.	Gupta RS, Patel S.	Front Microbiol	10.3389/fmicb.2019.02821	2019
Phylogeny	Description of Lysinibacillus telephonicus sp. nov., isolated from the screen of a cellular phone.	Rahi P, Kurli R, Khairnar M, Jagtap S, Pansare AN, Dastager SG, Shouche YS	Int J Syst Evol Microbiol	10.1099/ijsem.0.001943	2017

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#43308	Praveen Rahi, Rashmi Kurli, Mitesh Khairnar, Shubhangi Jagtap, Aabeejjeet N. Pansare, Syed G. Dastager, Yogesh S. Shouche: Description of Lysinibacillus telephonicus sp. nov., isolated from the screen of a cellular phone. IJSEM 67: 2289 - 2295 2017 ( DOI 10.1099/ijsem.0.001943 , PubMed 28699866 )
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#66794	Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 )
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )

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Lysinibacillus telephonicus (MCC 3065, KACC 18714, LMG 29294)

Name and taxonomic classification

Culture Collection Numbers

Morphology

Cell morphology

Colony morphology

Culture and growth conditions

Culture medium

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Spore formation

Halophily

Metabolite utilization

Enzymes

Pathway annotation

Fatty acid profile

Isolation, sampling and environmental information

Taxonmaps

Interaction and safety

Sequence information

Genome sequences

Genome browser: GCA_003966145

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

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